Strain identifier
BacDive ID: 11769
Type strain: 
Species: Desulfitobacterium hafniense
Strain Designation: G2
Strain history: <- E. S. Shelobolina, UMASS; G2 <- E. S. Shelobolina {2000}
NCBI tax ID(s): 49338 (species)
General
@ref: 6343
BacDive-ID: 11769
DSM-Number: 16228
keywords: 16S sequence, Bacteria, anaerobe, mesophilic
description: Desulfitobacterium hafniense G2 is an anaerobe, mesophilic bacterium that was isolated from subsurface clay bedding.
NCBI tax id
- NCBI tax id: 49338
- Matching level: species
strain history
- @ref: 6343
- history: <- E. S. Shelobolina, UMASS; G2 <- E. S. Shelobolina {2000}
doi: 10.13145/bacdive11769.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacillota
- domain: Bacteria
- phylum: Bacillota
- class: Clostridia
- order: Eubacteriales
- family: Desulfitobacteriaceae
- genus: Desulfitobacterium
- species: Desulfitobacterium hafniense
- full scientific name: Desulfitobacterium hafniense Christiansen and Ahring 1996
synonyms
- @ref: 20215
- synonym: Desulfitobacterium frappieri
@ref: 6343
domain: Bacteria
phylum: Firmicutes
class: Clostridia
order: Clostridiales
family: Peptococcaceae
genus: Desulfitobacterium
species: Desulfitobacterium hafniense
full scientific name: Desulfitobacterium hafniense Christiansen and Ahring 1996 emend. Niggemyer et al. 2001
strain designation: G2
type strain: no
Culture and growth conditions
culture medium
- @ref: 6343
- name: GEOANAEROBACTER MEDIUM (DSMZ Medium 838)
- growth: yes
- link: https://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium838.pdf
culture temp
- @ref: 6343
- growth: positive
- type: growth
- temperature: 30
- range: mesophilic
Physiology and metabolism
oxygen tolerance
- @ref: 6343
- oxygen tolerance: anaerobe
Isolation, sampling and environmental information
isolation
- @ref: 6343
- sample type: subsurface clay bedding
- geographic location: Georgia
- country: USA
- origin.country: USA
- continent: North America
isolation source categories
- Cat1: #Environmental
- Cat2: #Terrestrial
taxonmaps
- @ref: 69479
- File name: preview.99_832.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_99;96_501;97_574;98_660;99_832&stattab=map
- Last taxonomy: Desulfitobacterium hafniense subclade
- 16S sequence: AF320982
- Sequence Identity:
- Total samples: 874
- soil counts: 503
- aquatic counts: 132
- animal counts: 217
- plant counts: 22
Safety information
risk assessment
- @ref: 6343
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
- @ref: 6343
- description: Desulfitobacterium frappieri strain G2 16S ribosomal RNA gene, partial sequence
- accession: AF320982
- length: 1394
- database: ena
- NCBI tax ID: 49338
External links
@ref: 6343
culture collection no.: DSM 16228
straininfo link
- @ref: 80987
- straininfo: 143389
Reference
| @id | authors | catalogue | doi/url | title |
|---|---|---|---|---|
| 6343 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 16228) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-16228 | |
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | https://microbeatlas.org/ | MicrobeAtlas 1.0 beta | |
| 80987 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID143389.1 | StrainInfo: A central database for resolving microbial strain identifiers |