Strain identifier

BacDive ID: 11747

Type strain: Yes

Species: Bibersteinia trehalosi

Strain Designation: A92, S110, serovar 3/T15

Culture col. no.: DSM 23101, ATCC 29703, CCUG 27190, CIP 103829, NCTC 10370, CCM 4733

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 16699

BacDive-ID: 11747

DSM-Number: 23101

keywords: mesophilic, microaerophile, Bacteria, 16S sequence, genome sequence, animal pathogen

description: Bibersteinia trehalosi A92 is a microaerophile, mesophilic animal pathogen that was isolated from ovine septicaemia.

strain history: <- CCUG <- NCTC <- J. G. Brotherston; S110

doi: 10.13145/bacdive11747.20201210.5

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/proteobacteria
  • domain: Bacteria
  • phylum: Proteobacteria
  • class: Gammaproteobacteria
  • order: Pasteurellales
  • family: Pasteurellaceae
  • genus: Bibersteinia
  • species: Bibersteinia trehalosi
  • full scientific name: Bibersteinia trehalosi (Sneath and Stevens 1990) Blackall et al. 2007
  • synonyms

    • @ref: 20215
    • synonym: Pasteurella trehalosi

@ref: 16699

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Pasteurellales

family: Pasteurellaceae

genus: Bibersteinia

species: Bibersteinia trehalosi

full scientific name: Bibersteinia trehalosi (Sneath and Stevens 1990) Blackall et al. 2007

strain designation: A92, S110, serovar 3/T15

type strain: yes

Culture and growth conditions

culture medium

@refnamegrowthlinkcomposition
16699COLUMBIA BLOOD MEDIUM (DSMZ Medium 693), microaerophilicyeshttps://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium693.pdf
16699BHI MEDIUM (DSMZ Medium 215), microaerophilicyeshttps://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium215.pdf
40804MEDIUM 118 - for Pasteurella, Actinobacillus and Psychrobacter frigidicolayesDistilled water make up to (1000.000 ml);Yeast extract (1.000 g);Tryptocasein soy agar (40.000 g)

culture temp

@refgrowthtypetemperaturerange
16699positivegrowth37mesophilic
40804positivegrowth37mesophilic
48678positivegrowth37mesophilic

Physiology and metabolism

oxygen tolerance

@refoxygen tolerance
16699microaerophile
48678microaerophile

API NH

@refPENGLUFRUMALSACODCURELIPPALbeta GALProAGGTIND
16699-+/-+-+--+/-+-++-

Isolation, sampling and environmental information

isolation

@refsample typecountryorigin.countrycontinentsampling date
16699ovine septicaemiaUnited KingdomGBREurope
48678Lamb,septicaemia1958

isolation source categories

Cat1Cat2Cat3
#Infection#Disease
#Host#Mammals#Caprinae (Sheep/Goat)

Safety information

risk assessment

  • @ref: 16699
  • pathogenicity animal: yes
  • biosafety level: 2
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

  • @ref: 16699
  • description: Bibersteinia trehalosi strain NCTC 10370 16S ribosomal RNA gene, partial sequence
  • accession: AY362927
  • length: 1362
  • database: ena
  • NCBI tax ID: 47735

Genome sequences

@refdescriptionaccessionassembly leveldatabaseNCBI tax ID
66792Bibersteinia trehalosi DSM 23101GCA_004346205scaffoldncbi47735
66792Bibersteinia trehalosi OADDL-BT1GCA_003892335scaffoldncbi47735
66792Bibersteinia trehalosi strain 1369847735.14plasmidpatric47735
66792Bibersteinia trehalosi strain DSM 2310147735.17wgspatric47735
66792Bibersteinia trehalosi strain OADDL-BT147735.15wgspatric47735
66792Bibersteinia trehalosi DSM 231012784746803permanentimg47735

GC content

  • @ref: 16699
  • GC-content: 42.6

External links

@ref: 16699

culture collection no.: DSM 23101, ATCC 29703, CCUG 27190, CIP 103829, NCTC 10370, CCM 4733

straininfo link

@refpassport
20218http://www.straininfo.net/strains/120457
20218http://www.straininfo.net/strains/141378
20218http://www.straininfo.net/strains/153769
20218http://www.straininfo.net/strains/120458

Reference

@idauthorscataloguedoi/urltitlejournalpubmed
16699Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 23101)https://www.dsmz.de/collection/catalogue/details/culture/DSM-23101
20215D.Gleim, M.Kracht, N.Weiss et. al.http://www.dsmz.de/bacterial-diversity/prokaryotic-nomenclature-up-to-date.htmlProkaryotic Nomenclature Up-to-date - compilation of all names of Bacteria and Archaea, validly published according to the Bacteriological Code since 1. Jan. 1980, and validly published nomenclatural changes since
20218Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.10.1016/j.syapm.2013.11.002StrainInfo introduces electronic passports for microorganisms.Syst Appl Microbiol. 37: 42-50 201424321274
40804Curators of the CIPhttps://brclims.pasteur.fr/brcWeb/souche/detail/1/15670
48678Curators of the CCUGCulture Collection University of Gothenburg (CCUG) (CCUG 27190)https://www.ccug.se/strain?id=27190
66792Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmannhttps://diaspora-project.de/progress.html#genomesAutomatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)