Strain identifier

BacDive ID: 11677

Type strain: Yes

Species: Actinobacillus hominis

Strain Designation: 12, P 578, P578

Strain history: CIP <- 1986, NCTC <- 1982, A. Friis-Moeller: strain 12 = P578

NCBI tax ID(s): 719 (species)

« back to strain detail view
For citation purpose refer to the digital object identifier (doi) of the current version.
Archive
version 9 (current version):
version 8.1:
version 8:
version 7.1:
version 7:
version 6:
version 5:
version 4.1:
version 4:
version 3:
version 2.1:
version 2:
version 1:
version 9 (current version)

General

@ref: 16242

BacDive-ID: 11677

DSM-Number: 22262

keywords: 16S sequence, Bacteria, microaerophile, Gram-negative, rod-shaped

description: Actinobacillus hominis 12 is a microaerophile, Gram-negative, rod-shaped bacterium that was isolated from Human, Deep-cough sputum.

NCBI tax id

  • NCBI tax id: 719
  • Matching level: species

strain history

@refhistory
16242<- CCUG {2009} <- R. Mutters, HIM
119938CIP <- 1986, NCTC <- 1982, A. Friis-Moeller: strain 12 = P578

doi: 10.13145/bacdive11677.20240510.9

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Gammaproteobacteria
  • order: Pasteurellales
  • family: Pasteurellaceae
  • genus: Actinobacillus
  • species: Actinobacillus hominis
  • full scientific name: Actinobacillus hominis Friis-Møller 1985

@ref: 16242

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Pasteurellales

family: Pasteurellaceae

genus: Actinobacillus

species: Actinobacillus hominis

full scientific name: Actinobacillus hominis Friis-Møller 1985

strain designation: 12, P 578, P578

type strain: yes

Morphology

cell morphology

  • @ref: 119938
  • gram stain: negative
  • cell shape: rod-shaped
  • motility: no

colony morphology

@refincubation period
470583 days
119938

Culture and growth conditions

culture medium

@refnamegrowthlinkcomposition
16242BHI MEDIUM (DSMZ Medium 215)yeshttps://mediadive.dsmz.de/medium/215Name: BHI MEDIUM (DSMZ Medium 215) Composition: Brain heart infusion 37.0 g/l Distilled water
40384MEDIUM 118 - for Pasteurella, Actinobacillus and Psychrobacter frigidicolayesDistilled water make up to (1000.000 ml);Yeast extract (1.000 g);Tryptocasein soy agar (40.000 g)
119938CIP Medium 118-byeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=118-b

culture temp

@refgrowthtypetemperature
16242positivegrowth37
40384positivegrowth37
119938positivegrowth25-37
119938nogrowth15
119938nogrowth41
119938nogrowth45

Physiology and metabolism

oxygen tolerance

@refoxygen tolerance
47058microaerophile
119938facultative anaerobe

metabolite utilization

@refmetaboliteutilization activitykind of utilization testedChebi-ID
68371Potassium 5-ketogluconate+builds acid from
68371Potassium 2-ketogluconate-builds acid from
68371gluconate+builds acid from24265
68371L-arabitol-builds acid from18403
68371D-arabitol-builds acid from18333
68371L-fucose-builds acid from18287
68371D-fucose-builds acid from28847
68371D-tagatose-builds acid from16443
68371D-lyxose-builds acid from62318
68371turanose-builds acid from32528
68371gentiobiose-builds acid from28066
68371xylitol-builds acid from17151
68371glycogen-builds acid from28087
68371starch-builds acid from28017
68371raffinose+builds acid from16634
68371melezitose-builds acid from6731
68371inulin-builds acid from15443
68371trehalose+builds acid from27082
68371sucrose+builds acid from17992
68371melibiose-builds acid from28053
68371lactose+builds acid from17716
68371maltose+builds acid from17306
68371cellobiose-builds acid from17057
68371salicin-builds acid from17814
68371esculin-builds acid from4853
68371arbutin-builds acid from18305
68371amygdalin-builds acid from27613
68371N-acetylglucosamine+builds acid from59640
68371methyl alpha-D-glucopyranoside-builds acid from320061
68371methyl alpha-D-mannoside-builds acid from43943
68371D-sorbitol-builds acid from17924
68371D-mannitol+builds acid from16899
68371myo-inositol-builds acid from17268
68371galactitol-builds acid from16813
68371L-rhamnose-builds acid from62345
68371L-sorbose-builds acid from17266
68371D-mannose-builds acid from16024
68371D-fructose+builds acid from15824
68371D-glucose+builds acid from17634
68371D-galactose+builds acid from12936
68371methyl beta-D-xylopyranoside-builds acid from74863
68371ribitol-builds acid from15963
68371L-xylose-builds acid from65328
68371D-xylose-builds acid from65327
68371D-ribose+builds acid from16988
68371L-arabinose-builds acid from30849
68371D-arabinose-builds acid from17108
68371erythritol-builds acid from17113
68371glycerol+builds acid from17754
119938hippurate-hydrolysis606565
119938nitrate-reduction17632
119938nitrite-reduction16301
68377D-glucose+builds acid from17634
68377D-fructose+builds acid from15824
68377maltose+builds acid from17306
68377urea+hydrolysis16199
68377tryptophan-energy source27897

antibiotic resistance

  • @ref: 119938
  • metabolite: 0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)
  • is antibiotic: yes
  • is sensitive: yes
  • is resistant: no

metabolite production

@refChebi-IDmetaboliteproduction
6837735581indoleno
11993835581indoleno

metabolite tests

@refChebi-IDmetaboliteindole testvoges-proskauer-test
6837735581indole-
11993815688acetoin-

enzymes

@refvalueactivityec
68377tryptophan deaminase-4.1.99.1
68377alkaline phosphatase+3.1.3.1
68377lipase+
68377urease+3.5.1.5
119938oxidase-
119938beta-galactosidase+3.2.1.23
119938alcohol dehydrogenase-1.1.1.1
119938catalase+1.11.1.6
119938gamma-glutamyltransferase-2.3.2.2
119938lysine decarboxylase-4.1.1.18
119938ornithine decarboxylase-4.1.1.17
119938urease+3.5.1.5
68382alkaline phosphatase+3.1.3.1
68382esterase (C 4)+
68382esterase lipase (C 8)+
68382lipase (C 14)-
68382leucine arylamidase+3.4.11.1
68382valine arylamidase-
68382cystine arylamidase-3.4.11.3
68382trypsin-3.4.21.4
68382alpha-chymotrypsin-3.4.21.1
68382acid phosphatase+3.1.3.2
68382naphthol-AS-BI-phosphohydrolase+
68382alpha-galactosidase+3.2.1.22
68382beta-galactosidase+3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase+3.2.1.20
68382beta-glucosidase-3.2.1.21
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382alpha-mannosidase-3.2.1.24
68382alpha-fucosidase-3.2.1.51

fatty acid profile

  • fatty acids

    @reffatty acidpercentageECL
    47058C12:00.612
    47058C14:022.714
    47058C16:03016
    47058C18:03.118
    47058C13:0 ISO 2OH0.513.814
    47058C14:0 3OH/C16:1 ISO I8.815.485
    47058C16:1 ω7c27.115.819
    47058C18:1 ω9c2.717.769
    47058C18:2 ω6,9c/C18:0 ANTE3.617.724
    47058unknown 14.5030.614.503
    47058unknown 9.1400.49.14
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
119938-+++-+----++++-+----

API 50CHac

@refGLYERYDARALARARIBDXYLLXYLADOMDXGALGLUFRUMNESBERHADULINOMANSORMDMMDGNAGAMYARBESCSALCELMALLACMELSACTREINUMLZRAFAMDGLYGXLTGENTURLYXTAGDFUCLFUCDARLLARLGNT2KG5KG
119938+---+----+++-----+---+-----++-++--+-----------+-+

API NH

@refPENGLUFRUMALSACODCURELIPPALbeta GALProAGGTIND
16242++++-++++-+--
16242-++++-++++-+-

Isolation, sampling and environmental information

isolation

  • @ref: 119938
  • sample type: Human, Deep-cough sputum

taxonmaps

  • @ref: 69479
  • File name: preview.99_91582.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_18;96_155;97_166;98_344;99_91582&stattab=map
  • Last taxonomy: Actinobacillus hominis
  • 16S sequence: L06076
  • Sequence Identity:
  • Total samples: 326
  • aquatic counts: 2
  • animal counts: 324

Safety information

risk assessment

@refbiosafety levelbiosafety level comment
162422Risk group (German classification)
1199381Risk group (French classification)

Sequence information

16S sequences

@refdescriptionaccessionlengthdatabaseNCBI tax ID
20218Actinobacillus hominis partial 16S rRNA gene, strain P578AJ438666435nuccore719
20218Actinobacillus hominis strain CCUG 19800 16S ribosomal RNA gene, partial sequenceL060761485nuccore719
20218Actinobacillus hominis 16S ribosomal RNA, partial sequenceAH001562100nuccore719
16242Actinobacillus hominis strain NCTC 11529 16S ribosomal RNA gene, partial sequenceAY3628901362nuccore719

External links

@ref: 16242

culture collection no.: DSM 22262, ATCC 49457, CCUG 19800, CIP 102631, NCTC 11529

straininfo link

  • @ref: 80897
  • straininfo: 46103

Reference

@idauthorscataloguedoi/urltitlejournalpubmed
16242Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 22262)https://www.dsmz.de/collection/catalogue/details/culture/DSM-22262
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
20218Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.10.1016/j.syapm.2013.11.002StrainInfo introduces electronic passports for microorganisms.Syst Appl Microbiol. 37: 42-50 201424321274
40384Curators of the CIPhttps://brclims.pasteur.fr/brcWeb/souche/detail/1/14339
47058Curators of the CCUGCulture Collection University of Gothenburg (CCUG) (CCUG 19800)https://www.ccug.se/strain?id=19800
68371Automatically annotated from API 50CH acid
68377Automatically annotated from API NH
68382Automatically annotated from API zym
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.https://microbeatlas.org/MicrobeAtlas 1.0 beta
80897Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID46103.1StrainInfo: A central database for resolving microbial strain identifiers
119938Curators of the CIPCollection of Institut Pasteur (CIP 102631)https://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20102631