Strain identifier

BacDive ID: 11565

Type strain: No

Species: Paenibacillus agarexedens

Strain Designation: 4

Strain history: <- D. Claus, 4

NCBI tax ID(s): 171401 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 778

BacDive-ID: 11565

DSM-Number: 1473

keywords: Bacteria, mesophilic

description: Paenibacillus agarexedens 4 is a mesophilic bacterium that was isolated from compost.

NCBI tax id

  • NCBI tax id: 171401
  • Matching level: species

strain history

  • @ref: 778
  • history: <- D. Claus, 4

doi: 10.13145/bacdive11565.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacillota
  • domain: Bacteria
  • phylum: Bacillota
  • class: Bacilli
  • order: Caryophanales
  • family: Paenibacillaceae
  • genus: Paenibacillus
  • species: Paenibacillus agarexedens
  • full scientific name: Paenibacillus agarexedens (ex Wieringa 1941) Uetanabaro et al. 2003

@ref: 778

domain: Bacteria

phylum: Firmicutes

class: Bacilli

order: Bacillales

family: Paenibacillaceae

genus: Paenibacillus

species: Paenibacillus agarexedens

full scientific name: Paenibacillus agarexedens (ex Wieringa 1941) Uetanabaro et al. 2003

strain designation: 4

type strain: no

Culture and growth conditions

culture medium

  • @ref: 778
  • name: NUTRIENT AGAR (DSMZ Medium 1)
  • growth: yes
  • link: https://mediadive.dsmz.de/medium/1
  • composition: Name: NUTRIENT AGAR (DSMZ Medium 1; with strain-specific modifications) Composition: Agar 15.0 g/l Peptone 5.0 g/l Meat extract 3.0 g/l Urea 2.0 g/l Distilled water

culture temp

  • @ref: 778
  • growth: positive
  • type: growth
  • temperature: 30
  • range: mesophilic

Isolation, sampling and environmental information

isolation

  • @ref: 778
  • sample type: compost
  • geographic location: Göttingen
  • country: Germany
  • origin.country: DEU
  • continent: Europe

isolation source categories

  • Cat1: #Engineered
  • Cat2: #Biodegradation
  • Cat3: #Composting

Safety information

risk assessment

  • @ref: 778
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

GC content

  • @ref: 778
  • GC-content: 47.9

External links

@ref: 778

culture collection no.: DSM 1473

straininfo link

  • @ref: 80793
  • straininfo: 47420

Reference

@idauthorscataloguedoi/urltitle
778Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 1473)https://www.dsmz.de/collection/catalogue/details/culture/DSM-1473
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
80793Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID47420.1StrainInfo: A central database for resolving microbial strain identifiers