Strain identifier

BacDive ID: 11530

Type strain: No

Species: Paenibacillus sp.

Strain Designation: Mena 25/4-3

Strain history: <- A. Tinschert, Lonza AG, Visp, Mena 25/4-3

NCBI tax ID(s): 58172 (species)

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General

@ref: 4373

BacDive-ID: 11530

DSM-Number: 11456

keywords: 16S sequence, Bacteria, mesophilic

description: Paenibacillus sp. Mena 25/4-3 is a mesophilic bacterium that was isolated from soil.

NCBI tax id

  • NCBI tax id: 58172
  • Matching level: species

strain history

  • @ref: 4373
  • history: <- A. Tinschert, Lonza AG, Visp, Mena 25/4-3

doi: 10.13145/bacdive11530.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacillota
  • domain: Bacteria
  • phylum: Bacillota
  • class: Bacilli
  • order: Caryophanales
  • family: Paenibacillaceae
  • genus: Paenibacillus
  • species: Paenibacillus sp.
  • full scientific name: Paenibacillus Ash et al. 1994

  • synonyms

    • @ref: 20215
    • synonym: Aerobacillus

@ref: 4373

domain: Bacteria

phylum: Firmicutes

class: Bacilli

order: Bacillales

family: Paenibacillaceae

genus: Paenibacillus

species: Paenibacillus sp.

full scientific name: Paenibacillus sp.

strain designation: Mena 25/4-3

type strain: no

Culture and growth conditions

culture medium

  • @ref: 4373
  • name: MINERALMEDIUM WITH 6-METHYLNICOTINATE (DSMZ Medium 465h)
  • growth: yes
  • link: https://mediadive.dsmz.de/medium/465h
  • composition: Name: MINERALMEDIUM WITH 6-METHYLNICOTINATE (DSMZ Medium 465h) Composition: 6-methylnicotinate 5.0 g/l Na2HPO4 x 2 H2O 3.5 g/l KH2PO4 1.0 g/l (NH4)2SO4 0.5 g/l MgCl2 x 6 H2O 0.1 g/l Ca(NO3)2 x 4 H2O 0.05 g/l NaOH 0.0005 g/l EDTA 0.0005 g/l FeSO4 x 7 H2O 0.0002 g/l p-Aminobenzoic acid 5e-05 g/l alpha-lipoic acid 5e-05 g/l Riboflavin 5e-05 g/l Pantothenic acid 5e-05 g/l Vitamin B12 5e-05 g/l Thiamine-HCl x 2 H2O 5e-05 g/l H3BO3 3e-05 g/l Nicotine amide 2.5e-05 g/l Nicotinic acid 2.5e-05 g/l Folic acid 2e-05 g/l Biotin 2e-05 g/l CoCl2 x 6 H2O 2e-05 g/l ZnSO4 x 7 H2O 1e-05 g/l Pyridoxamine hydrochloride 1e-05 g/l Na2WO4 x 2 H2O 4e-06 g/l Na2MoO4 x 2 H2O 3e-06 g/l Na2SeO3 x 5 H2O 3e-06 g/l MnCl2 x 4 H2O 3e-06 g/l NiCl2 x 6 H2O 2e-06 g/l CuCl2 x 2 H2O 1e-06 g/l Distilled water

culture temp

  • @ref: 4373
  • growth: positive
  • type: growth
  • temperature: 30
  • range: mesophilic

Isolation, sampling and environmental information

isolation

  • @ref: 4373
  • sample type: soil
  • geographic location: Wallis
  • country: Switzerland
  • origin.country: CHE
  • continent: Europe

isolation source categories

  • Cat1: #Environmental
  • Cat2: #Terrestrial
  • Cat3: #Soil

taxonmaps

  • @ref: 69479
  • File name: preview.99_4993.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_5;96_220;97_697;98_3733;99_4993&stattab=map
  • Last taxonomy: Mesorhizobium
  • 16S sequence: Y11584
  • Sequence Identity:
  • Total samples: 657
  • soil counts: 439
  • aquatic counts: 80
  • animal counts: 122
  • plant counts: 16

Sequence information

16S sequences

  • @ref: 4373
  • description: Alpha proteobacterium 'Mena 25/4-1' 16S ribosomal RNA
  • accession: Y11584
  • length: 1433
  • database: ena
  • NCBI tax ID: 58170

External links

@ref: 4373

culture collection no.: DSM 11456

straininfo link

  • @ref: 80761
  • straininfo: 49114

Reference

@idauthorscataloguedoi/urltitle
4373Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 11456)https://www.dsmz.de/collection/catalogue/details/culture/DSM-11456
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.https://microbeatlas.org/MicrobeAtlas 1.0 beta
80761Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID49114.1StrainInfo: A central database for resolving microbial strain identifiers