Strain identifier
BacDive ID: 11528
Type strain:
Species: Paenibacillus sp.
Strain Designation: 32829, Shaw 32829
Strain history: <- ATCC (Bacillus circulans) <- M. Shaw, 32829 (Bacillus palustris var. gelaticus)
NCBI tax ID(s): 171403 (species)
General
@ref: 2035
BacDive-ID: 11528
DSM-Number: 34
keywords: 16S sequence, Bacteria, mesophilic
description: Paenibacillus sp. 32829 is a mesophilic bacterium that was isolated from decayed tree stump in swampy area.
NCBI tax id
- NCBI tax id: 171403
- Matching level: species
strain history
- @ref: 2035
- history: <- ATCC (Bacillus circulans) <- M. Shaw, 32829 (Bacillus palustris var. gelaticus)
doi: 10.13145/bacdive11528.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacillota
- domain: Bacteria
- phylum: Bacillota
- class: Bacilli
- order: Caryophanales
- family: Paenibacillaceae
- genus: Paenibacillus
- species: Paenibacillus sp.
- full scientific name: Paenibacillus Ash et al. 1994
synonyms
- @ref: 20215
- synonym: Aerobacillus
@ref: 2035
domain: Bacteria
phylum: Firmicutes
class: Bacilli
order: Bacillales
family: Paenibacillaceae
genus: Paenibacillus
species: Paenibacillus sp.
full scientific name: Paenibacillus sp.
strain designation: 32829, Shaw 32829
type strain: no
Culture and growth conditions
culture medium
- @ref: 2035
- name: NUTRIENT AGAR (DSMZ Medium 1)
- growth: yes
- link: https://mediadive.dsmz.de/medium/1
- composition: Name: NUTRIENT AGAR (DSMZ Medium 1) Composition: Agar 15.0 g/l Peptone 5.0 g/l Meat extract 3.0 g/l Distilled water
culture temp
- @ref: 2035
- growth: positive
- type: growth
- temperature: 30
- range: mesophilic
Isolation, sampling and environmental information
isolation
- @ref: 2035
- sample type: decayed tree stump in swampy area
isolation source categories
Cat1 | Cat2 | Cat3 |
---|---|---|
#Environmental | #Terrestrial | #Wetland (Swamp) |
#Host | #Plants | #Decomposing plant |
#Host | #Plants | #Tree |
#Host Body-Site | #Plant | #Stem (Branch) |
taxonmaps
- @ref: 69479
- File name: preview.99_27514.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_15358;96_2674;97_16591;98_20585;99_27514&stattab=map
- Last taxonomy: Paenibacillus sp.
- 16S sequence: AJ345022
- Sequence Identity:
- Total samples: 41
- soil counts: 27
- aquatic counts: 9
- animal counts: 2
- plant counts: 3
Sequence information
16S sequences
- @ref: 20218
- description: Paenibacillus sp. DSM 34 partial 16S rRNA gene, strain DSM 34
- accession: AJ345022
- length: 1486
- database: ena
- NCBI tax ID: 171403
GC content
- @ref: 2035
- GC-content: 51.1
External links
@ref: 2035
culture collection no.: DSM 34, ATCC 14176, NCIB 10002
straininfo link
- @ref: 80759
- straininfo: 8303
Reference
@id | authors | catalogue | doi/url | title | journal | pubmed |
---|---|---|---|---|---|---|
2035 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 34) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-34 | |||
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |||
20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P. | 10.1016/j.syapm.2013.11.002 | StrainInfo introduces electronic passports for microorganisms. | Syst Appl Microbiol. 37: 42-50 2014 | 24321274 | |
69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | https://microbeatlas.org/ | MicrobeAtlas 1.0 beta | |||
80759 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID8303.1 | StrainInfo: A central database for resolving microbial strain identifiers |