Strain identifier
BacDive ID: 11526
Type strain:
Species: Paenibacillus sp.
Strain Designation: M
Strain history: <- K.A. Malik, M
NCBI tax ID(s): 171400 (species)
version 8.1 (current version)
General
@ref: 786
BacDive-ID: 11526
DSM-Number: 1482
keywords: 16S sequence, Bacteria, mesophilic
description: Paenibacillus sp. M is a mesophilic bacterium that was isolated from contaminated agar plate.
NCBI tax id
- NCBI tax id: 171400
- Matching level: species
strain history
- @ref: 786
- history: <- K.A. Malik, M
doi: 10.13145/bacdive11526.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacillota
- domain: Bacteria
- phylum: Bacillota
- class: Bacilli
- order: Caryophanales
- family: Paenibacillaceae
- genus: Paenibacillus
- species: Paenibacillus sp.
- full scientific name: Paenibacillus Ash et al. 1994
synonyms
- @ref: 20215
- synonym: Aerobacillus
@ref: 786
domain: Bacteria
phylum: Firmicutes
class: Bacilli
order: Bacillales
family: Paenibacillaceae
genus: Paenibacillus
species: Paenibacillus sp.
full scientific name: Paenibacillus sp.
strain designation: M
type strain: no
Culture and growth conditions
culture medium
- @ref: 786
- name: NUTRIENT AGAR (DSMZ Medium 1)
- growth: yes
- link: https://mediadive.dsmz.de/medium/1
- composition: Name: NUTRIENT AGAR (DSMZ Medium 1; with strain-specific modifications) Composition: Agar 15.0 g/l Peptone 5.0 g/l Meat extract 3.0 g/l Urea 1.0 g/l Distilled water
culture temp
- @ref: 786
- growth: positive
- type: growth
- temperature: 30
- range: mesophilic
Isolation, sampling and environmental information
isolation
- @ref: 786
- sample type: contaminated agar plate
- geographic location: Göttingen
- country: Germany
- origin.country: DEU
- continent: Europe
isolation source categories
Cat1 | Cat2 | Cat3 |
---|---|---|
#Engineered | #Contamination | |
#Engineered | #Laboratory | #Lab enrichment |
taxonmaps
- @ref: 69479
- File name: preview.99_27512.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_15358;96_3809;97_4698;98_13278;99_27512&stattab=map
- Last taxonomy: Paenibacillus
- 16S sequence: AJ345019
- Sequence Identity:
- Total samples: 1868
- soil counts: 1105
- aquatic counts: 44
- animal counts: 21
- plant counts: 698
Sequence information
16S sequences
- @ref: 20218
- description: Paenibacillus sp. DSM 1482 partial 16S rRNA gene, strain DSM 1482
- accession: AJ345019
- length: 1438
- database: ena
- NCBI tax ID: 171400
GC content
- @ref: 786
- GC-content: 44.5
External links
@ref: 786
culture collection no.: DSM 1482
straininfo link
- @ref: 80757
- straininfo: 47428
Reference
@id | authors | catalogue | doi/url | title | journal | pubmed |
---|---|---|---|---|---|---|
786 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 1482) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-1482 | |||
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |||
20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P. | 10.1016/j.syapm.2013.11.002 | StrainInfo introduces electronic passports for microorganisms. | Syst Appl Microbiol. 37: 42-50 2014 | 24321274 | |
69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | https://microbeatlas.org/ | MicrobeAtlas 1.0 beta | |||
80757 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID47428.1 | StrainInfo: A central database for resolving microbial strain identifiers |