Strain identifier

BacDive ID: 11525

Type strain: No

Species: Paenibacillus sp.

Strain Designation: 44

Strain history: <- D. Claus, 44

NCBI tax ID(s): 171405 (species)

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General

@ref: 785

BacDive-ID: 11525

DSM-Number: 1481

keywords: 16S sequence, Bacteria, mesophilic

description: Paenibacillus sp. 44 is a mesophilic bacterium that was isolated from field soil.

NCBI tax id

  • NCBI tax id: 171405
  • Matching level: species

strain history

  • @ref: 785
  • history: <- D. Claus, 44

doi: 10.13145/bacdive11525.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacillota
  • domain: Bacteria
  • phylum: Bacillota
  • class: Bacilli
  • order: Caryophanales
  • family: Paenibacillaceae
  • genus: Paenibacillus
  • species: Paenibacillus sp.
  • full scientific name: Paenibacillus Ash et al. 1994
  • synonyms

    • @ref: 20215
    • synonym: Aerobacillus

@ref: 785

domain: Bacteria

phylum: Firmicutes

class: Bacilli

order: Bacillales

family: Paenibacillaceae

genus: Paenibacillus

species: Paenibacillus sp.

full scientific name: Paenibacillus sp.

strain designation: 44

type strain: no

Culture and growth conditions

culture medium

  • @ref: 785
  • name: NUTRIENT AGAR (DSMZ Medium 1)
  • growth: yes
  • link: https://mediadive.dsmz.de/medium/1
  • composition: Name: NUTRIENT AGAR (DSMZ Medium 1; with strain-specific modifications) Composition: Agar 15.0 g/l Peptone 5.0 g/l Meat extract 3.0 g/l Urea 1.0 g/l Distilled water

culture temp

  • @ref: 785
  • growth: positive
  • type: growth
  • temperature: 30
  • range: mesophilic

Isolation, sampling and environmental information

isolation

  • @ref: 785
  • sample type: field soil
  • geographic location: Rothamsted
  • country: United Kingdom
  • origin.country: GBR
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Engineered#Agriculture#Field
#Environmental#Terrestrial#Soil

taxonmaps

  • @ref: 69479
  • File name: preview.99_27515.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_15358;96_3991;97_16590;98_20584;99_27515&stattab=map
  • Last taxonomy: Paenibacillus
  • 16S sequence: AJ345024
  • Sequence Identity:
  • Total samples: 439
  • soil counts: 271
  • aquatic counts: 30
  • animal counts: 72
  • plant counts: 66

Sequence information

16S sequences

  • @ref: 20218
  • description: Paenibacillus sp. DSM 1481 partial 16S rRNA gene, strain DSM 1481
  • accession: AJ345024
  • length: 1431
  • database: ena
  • NCBI tax ID: 171405

GC content

  • @ref: 785
  • GC-content: 49.3

External links

@ref: 785

culture collection no.: DSM 1481

straininfo link

  • @ref: 80756
  • straininfo: 47427

Reference

@idauthorscataloguedoi/urltitlejournalpubmed
785Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 1481)https://www.dsmz.de/collection/catalogue/details/culture/DSM-1481
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
20218Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.10.1016/j.syapm.2013.11.002StrainInfo introduces electronic passports for microorganisms.Syst Appl Microbiol. 37: 42-50 201424321274
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.https://microbeatlas.org/MicrobeAtlas 1.0 beta
80756Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID47427.1StrainInfo: A central database for resolving microbial strain identifiers