Strain identifier

BacDive ID: 11381

Type strain: Yes

Species: Aneurinibacillus migulanus

Strain history: O. Shida <-- ATCC 9999 <-- NCTC 7096 <-- R. L. M. Synge <-- Inst. Trop. Med., Moscow.

NCBI tax ID(s): 47500 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 1161

BacDive-ID: 11381

DSM-Number: 2895

keywords: antibiotic compound production, mesophilic, Bacteria, 16S sequence, genome sequence

description: Aneurinibacillus migulanus DSM 2895 is a mesophilic bacterium that produces antibiotic compounds.

NCBI tax id

  • NCBI tax id: 47500
  • Matching level: species

strain history

doi: 10.13145/bacdive11381.20220920.7

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacillota
  • domain: Bacteria
  • phylum: Bacillota
  • class: Bacilli
  • order: Caryophanales
  • family: Paenibacillaceae
  • genus: Aneurinibacillus
  • species: Aneurinibacillus migulanus
  • full scientific name: Aneurinibacillus migulanus (Takagi et al. 1993) Shida et al. 1996
  • synonyms

    • @ref: 20215
    • synonym: Bacillus migulanus

@ref: 1161

domain: Bacteria

phylum: Firmicutes

class: Bacilli

order: Bacillales

family: Paenibacillaceae

genus: Aneurinibacillus

species: Aneurinibacillus migulanus

full scientific name: Aneurinibacillus migulanus (Takagi et al. 1993) Shida et al. 1996 emend. Heyndrickx et al. 1997

type strain: yes

Culture and growth conditions

culture medium

@refnamegrowthlinkcomposition
1161NUTRIENT AGAR (DSMZ Medium 1)yeshttps://bacmedia.dsmz.de/medium/1Name: NUTRIENT AGAR (DSMZ Medium 1) Composition: Agar 15.0 g/l Peptone 5.0 g/l Meat extract 3.0 g/l Distilled water
38152MEDIUM 3 - Columbia agaryesColumbia agar (39.000 g);distilled water (1000.000 ml)

culture temp

@refgrowthtypetemperaturerange
1161positivegrowth30mesophilic
38152positivegrowth30mesophilic
67770positivegrowth30mesophilic

Physiology and metabolism

compound production

@refcompound
1161gramicidin
1161protease
1161restriction endonuclease BbvI

observation

  • @ref: 67770
  • observation: quinones: MK-7

Isolation, sampling and environmental information

isolation

@refgeographic locationcountryorigin.countrycontinentsample type
38152MoscowRussiaRUSEurope
67770Garden soil

Safety information

risk assessment

  • @ref: 1161
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

@refdescriptionaccessionlengthdatabaseNCBI tax ID
20218Aneurinibacillus migulanus DNA for 16S ribosomal RNAD784621422ena47500
20218Aneurinibacillus migulanus strain B0270 16S ribosomal RNA gene, partial sequenceKC5276831006ena47500
20218Aneurinibacillus migulanus gene for 16S rRNA, partial sequence, strain:DSM 2895TAB1127231489ena47500
20218Aneurinibacillus migulanus isolate Am25 16S ribosomal RNA gene, partial sequence; 16S-23S internal transcribed spacer, complete sequence; and 23S ribosomal RNA gene, partial sequenceEU7236171157ena47500
20218B.migulanus 16S ribosomal RNAX941951483ena47500
20218Aneurinibacillus migulanus gene for 16S rRNA, partial sequence, strain: NBRC 15520AB6808891464ena47500
67770Aneurinibacillus migulanus gene for 16S rRNA, partial sequence, strain: JCM 8504LC3790681461ena47500

Genome sequences

@refdescriptionaccessionassembly leveldatabaseNCBI tax ID
66792Aneurinibacillus migulanus DSM 2895GCA_001274715scaffoldncbi47500
66792Aneurinibacillus migulanus DSM 2895GCA_900100065scaffoldncbi47500
66792Aneurinibacillus migulanus NCTC 7096GCA_000878905scaffoldncbi47500
66792Aneurinibacillus migulanus NBRC 15520GCA_006539965contigncbi47500
66792Aneurinibacillus migulanus strain DSM 289547500.9wgspatric47500
66792Aneurinibacillus migulanus strain DSM 289547500.13wgspatric47500
66792Aneurinibacillus migulanus strain NBRC 1552047500.16wgspatric47500
66792Aneurinibacillus migulanus strain NCTC 709647500.8wgspatric47500
66792Aneurinibacillus migulanus DSM 28952645727852draftimg47500
66792Aneurinibacillus migulanus DSM 28952615840722draftimg47500
66792Aneurinibacillus migulanus ATCC 99992563366674draftimg47500
66792Aneurinibacillus migulanus NCTC 70962627854104draftimg47500
67770Aneurinibacillus migulanus strain NBRC 15520, whole genome shotgun sequencing projectBJOA00000000ncbi47500
67770Aneurinibacillus migulanus strain DSM 2895, whole genome shotgun sequencing projectFNED00000000ncbi47500
67770Aneurinibacillus migulanus strain NCTC 7096, whole genome shotgun sequencing projectJYBO00000000ncbi47500
67770Aneurinibacillus migulanus strain DSM 2895, whole genome shotgun sequencing projectLGUG00000000ncbi47500

GC content

@refGC-contentmethod
116142.5
6777042.5high performance liquid chromatography (HPLC)
6777051.1Buoyant density centrifugation (BD)

External links

@ref: 1161

culture collection no.: DSM 2895, ATCC 9999, CIP 103841, IFO 15520, IFO 3864, JCM 8504, NBRC 15520, NBRC 3864, NCIB 7096, NCTC 7096, VKM B-1722, BCRC 11717, CGMCC 1.3475, KCTC 3835, LMG 12390, LMG 15427, NCIMB 7096, NRRL NRS-1137

straininfo link

@refpassport
20218http://www.straininfo.net/strains/29592
20218http://www.straininfo.net/strains/29590
20218http://www.straininfo.net/strains/29591
20218http://www.straininfo.net/strains/29593
20218http://www.straininfo.net/strains/29594
20218http://www.straininfo.net/strains/29595
20218http://www.straininfo.net/strains/335546
20218http://www.straininfo.net/strains/534179
20218http://www.straininfo.net/strains/158205
20218http://www.straininfo.net/strains/29599
20218http://www.straininfo.net/strains/29600

literature

topicPubmed-IDtitleauthorsjournalDOIyearmeshtopic2
Phenotype17720841The ability of Aneurinibacillus migulanus (Bacillus brevis) to produce the antibiotic gramicidin S is correlated with phenotype variation.Berditsch M, Afonin S, Ulrich ASAppl Environ Microbiol10.1128/AEM.00881-072007Anti-Bacterial Agents/*biosynthesis/pharmacology, Bacillus/*classification/drug effects/metabolism/physiology, Biotechnology/methods, Culture Media, Drug Resistance, Bacterial, Gramicidin/*biosynthesis/pharmacology, Phenotype, Spores, Bacterial/physiologyCultivation
Genetics25838489Draft Genome Sequence of Aneurinibacillus migulanus NCTC 7096.Alenezi FN, Weitz HJ, Belbahri L, Nidhal J, Luptakova L, Jaspars M, Woodward SGenome Announc10.1128/genomeA.00234-152015
Enzymology26467472A Multiple-Labeling Strategy for Nonribosomal Peptide Synthetases Using Active-Site-Directed Proteomic Probes for Adenylation Domains.Ishikawa F, Suzuki T, Dohmae N, Kakeya HChembiochem10.1002/cbic.2015004812015Azides/chemistry, Bacillales/enzymology, Bacterial Proteins/chemistry/*metabolism, Catalytic Domain, Click Chemistry, Electrophoresis, Polyacrylamide Gel, Molecular Probes/*chemistry, Peptide Synthases/*metabolism, Protein Structure, Tertiary, Proteome/analysisMetabolism
Genetics26494674High-Quality Draft Genome Sequence of Aneurinibacillus migulanus ATCC 9999T (DSM 2895), a Gramicidin S-Producing Bacterium Isolated from Garden Soil.Wang JP, Liu B, Liu GH, Ge CB, Xiao RF, Zheng XF, Shi HGenome Announc10.1128/genomeA.01227-152015Phylogeny
Phylogeny26542530Aneurinibacillus humi sp. nov., Isolated from Soil Collected in Ukraine.Lee K, Lee SSCurr Microbiol10.1007/s00284-015-0930-72015Aerobiosis, Bacillales/*classification/genetics/*isolation & purification/physiology, Bacterial Typing Techniques, Base Composition, Cell Wall/chemistry, Cluster Analysis, Cytosol/chemistry, DNA, Bacterial/chemistry/genetics, DNA, Ribosomal/chemistry/genetics, Diaminopimelic Acid/analysis, Fatty Acids/analysis, Hydrogen-Ion Concentration, Locomotion, Molecular Sequence Data, Peptidoglycan/analysis, Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, Sodium Chloride/metabolism, *Soil Microbiology, Spores, Bacterial/growth & development, Temperature, Ukraine, Vitamin K 2/analysisGenetics
Metabolism26686620Strain-level diversity of secondary metabolism in the biocontrol species Aneurinibacillus migulanus.Alenezi FN, Rekik I, Belka M, Ibrahim AF, Luptakova L, Jaspars M, Woodward S, Belbahri LMicrobiol Res10.1016/j.micres.2015.10.0072015Amino Acid Sequence, Antifungal Agents/chemistry/*metabolism/pharmacology, Bacillales/classification/genetics/*metabolism, Fungi/drug effects, Molecular Sequence Data, *Secondary Metabolism, Sequence Alignment, Species SpecificityPhylogeny
Biotechnology28439259Increased Biological Activity of Aneurinibacillus migulanus Strains Correlates with the Production of New Gramicidin Secondary Metabolites.Alenezi FN, Rekik I, Chenari Bouket A, Luptakova L, Weitz HJ, Rateb ME, Jaspars M, Woodward S, Belbahri LFront Microbiol10.3389/fmicb.2017.005172017

Reference

@idauthorscataloguedoi/urltitlejournalpubmed
1161Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 2895)https://www.dsmz.de/collection/catalogue/details/culture/DSM-2895
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
20218Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.10.1016/j.syapm.2013.11.002StrainInfo introduces electronic passports for microorganisms.Syst Appl Microbiol. 37: 42-50 201424321274
38152Curators of the CIPhttps://brclims.pasteur.fr/brcWeb/souche/detail/1/15683
66792Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmannhttps://diaspora-project.de/progress.html#genomesAutomatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)
66794Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg10.1093/nar/gkaa1025BRENDA, the ELIXIR core data resource in 2021: new developments and updatesNucleic Acids Res. 49: D498-D508 202033211880
67770Curators of the JCMhttps://jcm.brc.riken.jp/en/