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Strain identifier

BacDive ID: 11380

Type strain: Yes

Species: Bacillus aneurinilyticus

Strain Designation: Murayama

Strain history: O. Shida <-- ATCC 12856 <-- Y. Ito <-- R. Kimura.

NCBI tax ID(s): 649747 (strain), 1391 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 2190

BacDive-ID: 11380

DSM-Number: 5562

keywords: genome sequence, 16S sequence, Bacteria, mesophilic

description: Bacillus aneurinilyticus Murayama is a mesophilic bacterium of the family Bacillaceae.

NCBI tax id

NCBI tax idMatching level
1391species
649747strain

strain history

doi: 10.13145/bacdive11380.20221219.7.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacillota
  • domain: Bacteria
  • phylum: Bacillota
  • class: Bacilli
  • order: Caryophanales
  • family: Bacillaceae
  • genus: Bacillus
  • species: Bacillus aneurinilyticus
  • full scientific name: Bacillus aneurinilyticus corrig. (ex Kimura and Aoyama 1952) Shida et al. 1994
  • synonyms

    @refsynonym
    20215Bacillus aneurinolyticus
    20215Aneurinibacillus aneurinolyticus
    20215Aneurinibacillus aneurinilyticus

@ref: 2190

domain: Bacteria

phylum: Firmicutes

class: Bacilli

order: Bacillales

family: Paenibacillaceae

genus: Aneurinibacillus

species: Aneurinibacillus aneurinilyticus

full scientific name: Aneurinibacillus aneurinilyticus (Shida et al. 1994) Shida et al. 1996 emend. Heyndrickx et al. 1997

strain designation: Murayama

type strain: yes

Morphology

cell morphology

  • @ref: 69480
  • gram stain: positive
  • confidence: 86.348

Culture and growth conditions

culture medium

@refnamegrowthlinkcomposition
2190NUTRIENT AGAR (DSMZ Medium 1)yeshttps://mediadive.dsmz.de/medium/1Name: NUTRIENT AGAR (DSMZ Medium 1) Composition: Agar 15.0 g/l Peptone 5.0 g/l Meat extract 3.0 g/l Distilled water
38159MEDIUM 3 - Columbia agaryesColumbia agar (39.000 g);distilled water (1000.000 ml)

culture temp

@refgrowthtypetemperaturerange
2190positivegrowth30mesophilic
38159positivegrowth30mesophilic
67770positivegrowth30mesophilic

Physiology and metabolism

spore formation

  • @ref: 69480
  • spore formation: yes
  • confidence: 96.916

compound production

  • @ref: 67770
  • compound: Thiamine hydrolase

halophily

  • @ref: 69480
  • halophily level: non-halophilic
  • confidence: 97.48

observation

  • @ref: 67770
  • observation: quinones: MK-7

Isolation, sampling and environmental information

isolation

@refcountryorigin.countrycontinentsample type
38159JapanJPNAsia
67770Human feces

taxonmaps

  • @ref: 69479
  • File name: preview.99_916.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_162;96_542;97_625;98_723;99_916&stattab=map
  • Last taxonomy: Aneurinibacillus
  • 16S sequence: X94194
  • Sequence Identity:
  • Total samples: 1947
  • soil counts: 881
  • aquatic counts: 218
  • animal counts: 736
  • plant counts: 112

Safety information

risk assessment

  • @ref: 2190
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

@refdescriptionaccessionlengthdatabaseNCBI tax ID
20218Aneurinibacillus aneurinolyticus DNA for 16S ribosomal RNAD784551422ena649747
20218Aneurinibacillus aneurinilyticus gene for 16S rRNA, partial sequenceAB1015921489ena649747
20218Aneurinibacillus aneurinilyticus gene for 16S rRNA, partial sequence, strain:DSM 5562TAB1127241489ena649747
20218Aneurinibacillus aneurinilyticus isolate Aa15 16S ribosomal RNA gene, partial sequence; 16S-23S internal transcribed spacer, complete sequence; and 23S ribosomal RNA gene, partial sequenceEU723616545ena649747
20218B.aneurinolyticus 16S ribosomal RNAX941941482ena649747
20218Aneurinibacillus aneurinilyticus gene for 16S rRNA, partial sequenceAB2717551464ena649747

Genome sequences

@refdescriptionaccessionassembly leveldatabaseNCBI tax ID
66792Aneurinibacillus aneurinilyticus ATCC 12856649747.3wgspatric649747
66792Aneurinibacillus aneurinilyticus ATCC 128562563366762draftimg649747
67770Aneurinibacillus aneurinilyticus ATCC 12856 ATCC 12856GCA_000466385scaffoldncbi649747
66792Oxalobacteraceae bacterium OTU3REALA1 OTU3REALA1GCA_024123935completepatric2955019

GC content

  • @ref: 67770
  • GC-content: 42.9
  • method: high performance liquid chromatography (HPLC)

External links

@ref: 2190

culture collection no.: DSM 5562, ATCC 12856, CIP 104007, IAM 1077, IFO 15521, JCM 9024, NBRC 15521, NRS 1589, LMG 15531, LMG 16001, NRRL NRS-1589

straininfo link

@refpassport
20218http://www.straininfo.net/strains/33949
20218http://www.straininfo.net/strains/33947
20218http://www.straininfo.net/strains/33948
20218http://www.straininfo.net/strains/33950
20218http://www.straininfo.net/strains/33951
20218http://www.straininfo.net/strains/33953
20218http://www.straininfo.net/strains/335628

Reference

@idauthorscataloguedoi/urltitlejournalpubmed
2190Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 5562)https://www.dsmz.de/collection/catalogue/details/culture/DSM-5562
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
20218Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.10.1016/j.syapm.2013.11.002StrainInfo introduces electronic passports for microorganisms.Syst Appl Microbiol. 37: 42-50 201424321274
38159Curators of the CIPhttps://brclims.pasteur.fr/brcWeb/souche/detail/1/15868
66792Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmannhttps://diaspora-project.de/progress.html#genomesAutomatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)
67770Curators of the JCMhttps://jcm.brc.riken.jp/en/
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.https://microbeatlas.org/MicrobeAtlas 1.0 beta
69480Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmannhttps://diaspora-project.de/progress.html#genomesPredictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)