Strain identifier

BacDive ID: 11230

Type strain: Yes

Species: Nocardiopsis aegyptia subsp. aurantiaca

Strain history: <- W.-J. Li, YIM

NCBI tax ID(s): 220378 (species)

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General

@ref: 12021

BacDive-ID: 11230

DSM-Number: 44840

keywords: 16S sequence, mesophilic

description: Nocardiopsis aegyptia subsp. aurantiaca DSM 44840 is a mesophilic Actinobacterium that was isolated from hypersaline soil.

NCBI tax id

  • NCBI tax id: 220378
  • Matching level: species

strain history

  • @ref: 12021
  • history: <- W.-J. Li, YIM

doi: 10.13145/bacdive11230.20230509.8.1

Name and taxonomic classification

@ref: 12021

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Actinomycetales

family: Nocardiopsaceae

genus: Nocardiopsis

species: Nocardiopsis aegyptia subsp. aurantiaca

full scientific name: Nocardiopsis aegyptia subsp. aurantiaca Li et al.

type strain: yes

Culture and growth conditions

culture medium

@refnamegrowthlinkcomposition
12021BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)yeshttps://mediadive.dsmz.de/medium/514Name: BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514) Composition: NaCl 19.45 g/l MgCl2 5.9 g/l Bacto peptone 5.0 g/l Na2SO4 3.24 g/l CaCl2 1.8 g/l Yeast extract 1.0 g/l KCl 0.55 g/l NaHCO3 0.16 g/l Fe(III) citrate 0.1 g/l KBr 0.08 g/l SrCl2 0.034 g/l H3BO3 0.022 g/l Na2HPO4 0.008 g/l Na-silicate 0.004 g/l NaF 0.0024 g/l (NH4)NO3 0.0016 g/l Distilled water
12021GYM STREPTOMYCES MEDIUM 10% NACL (DSMZ Medium 1159)yeshttps://mediadive.dsmz.de/medium/1159Name: GYM STREPTOMYCES MEDIUM 10% NACL (DSMZ Medium 1159) Composition: NaCl 100.0 g/l Agar 15.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water
12021TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535)yeshttps://mediadive.dsmz.de/medium/535Name: TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Distilled water

culture temp

  • @ref: 12021
  • growth: positive
  • type: growth
  • temperature: 28
  • range: mesophilic

Isolation, sampling and environmental information

isolation

  • @ref: 12021
  • sample type: hypersaline soil
  • geographic location: Xin Jiang Province
  • country: China
  • origin.country: CHN
  • continent: Asia

isolation source categories

Cat1Cat2Cat3
#Environmental#Terrestrial#Soil
#Condition#Saline

taxonmaps

  • @ref: 69479
  • File name: preview.99_3419.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_152;96_659;97_762;98_2623;99_3419&stattab=map
  • Last taxonomy: Nocardiopsis
  • 16S sequence: AY373032
  • Sequence Identity:
  • Total samples: 25
  • soil counts: 4
  • aquatic counts: 2
  • animal counts: 19

Sequence information

16S sequences

  • @ref: 20218
  • description: Nocardiopsis sp. YIM 90039 16S ribosomal RNA gene, partial sequence
  • accession: AY373032
  • length: 1497
  • database: ena
  • NCBI tax ID: 245837

External links

@ref: 12021

culture collection no.: DSM 44840, CCTCC AA 204011, KCTC 19005, YIM 90039

Reference

@idauthorscataloguedoi/urltitlejournalpubmed
12021Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 44840)https://www.dsmz.de/collection/catalogue/details/culture/DSM-44840
20218Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.10.1016/j.syapm.2013.11.002StrainInfo introduces electronic passports for microorganisms.Syst Appl Microbiol. 37: 42-50 201424321274
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.https://microbeatlas.org/MicrobeAtlas 1.0 beta