Strain identifier
BacDive ID: 11230
Type strain:
Species: Nocardiopsis aegyptia subsp. aurantiaca
Strain history: <- W.-J. Li, YIM
NCBI tax ID(s): 220378 (species)
General
@ref: 12021
BacDive-ID: 11230
DSM-Number: 44840
keywords: 16S sequence, mesophilic
description: Nocardiopsis aegyptia subsp. aurantiaca DSM 44840 is a mesophilic Actinobacterium that was isolated from hypersaline soil.
NCBI tax id
- NCBI tax id: 220378
- Matching level: species
strain history
- @ref: 12021
- history: <- W.-J. Li, YIM
doi: 10.13145/bacdive11230.20230509.8.1
Name and taxonomic classification
@ref: 12021
domain: Bacteria
phylum: Actinobacteria
class: Actinobacteria
order: Actinomycetales
family: Nocardiopsaceae
genus: Nocardiopsis
species: Nocardiopsis aegyptia subsp. aurantiaca
full scientific name: Nocardiopsis aegyptia subsp. aurantiaca Li et al.
type strain: yes
Culture and growth conditions
culture medium
@ref | name | growth | link | composition |
---|---|---|---|---|
12021 | BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514) | yes | https://mediadive.dsmz.de/medium/514 | Name: BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514) Composition: NaCl 19.45 g/l MgCl2 5.9 g/l Bacto peptone 5.0 g/l Na2SO4 3.24 g/l CaCl2 1.8 g/l Yeast extract 1.0 g/l KCl 0.55 g/l NaHCO3 0.16 g/l Fe(III) citrate 0.1 g/l KBr 0.08 g/l SrCl2 0.034 g/l H3BO3 0.022 g/l Na2HPO4 0.008 g/l Na-silicate 0.004 g/l NaF 0.0024 g/l (NH4)NO3 0.0016 g/l Distilled water |
12021 | GYM STREPTOMYCES MEDIUM 10% NACL (DSMZ Medium 1159) | yes | https://mediadive.dsmz.de/medium/1159 | Name: GYM STREPTOMYCES MEDIUM 10% NACL (DSMZ Medium 1159) Composition: NaCl 100.0 g/l Agar 15.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water |
12021 | TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535) | yes | https://mediadive.dsmz.de/medium/535 | Name: TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Distilled water |
culture temp
- @ref: 12021
- growth: positive
- type: growth
- temperature: 28
- range: mesophilic
Isolation, sampling and environmental information
isolation
- @ref: 12021
- sample type: hypersaline soil
- geographic location: Xin Jiang Province
- country: China
- origin.country: CHN
- continent: Asia
isolation source categories
Cat1 | Cat2 | Cat3 |
---|---|---|
#Environmental | #Terrestrial | #Soil |
#Condition | #Saline |
taxonmaps
- @ref: 69479
- File name: preview.99_3419.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_152;96_659;97_762;98_2623;99_3419&stattab=map
- Last taxonomy: Nocardiopsis
- 16S sequence: AY373032
- Sequence Identity:
- Total samples: 25
- soil counts: 4
- aquatic counts: 2
- animal counts: 19
Sequence information
16S sequences
- @ref: 20218
- description: Nocardiopsis sp. YIM 90039 16S ribosomal RNA gene, partial sequence
- accession: AY373032
- length: 1497
- database: ena
- NCBI tax ID: 245837
External links
@ref: 12021
culture collection no.: DSM 44840, CCTCC AA 204011, KCTC 19005, YIM 90039
Reference
@id | authors | catalogue | doi/url | title | journal | pubmed |
---|---|---|---|---|---|---|
12021 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 44840) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-44840 | |||
20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P. | 10.1016/j.syapm.2013.11.002 | StrainInfo introduces electronic passports for microorganisms. | Syst Appl Microbiol. 37: 42-50 2014 | 24321274 | |
69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | https://microbeatlas.org/ | MicrobeAtlas 1.0 beta |