Strain identifier
BacDive ID: 11018
Type strain: 
Species: Rhodococcus opacus
Strain Designation: ISO-5
Strain history: <- D. Schleheck, Univ. Konstanz; ISO-5
NCBI tax ID(s): 37919 (species)
version 9.2 (current version)
General
@ref: 11915
BacDive-ID: 11018
DSM-Number: 44600
keywords: Bacteria, mesophilic
description: Rhodococcus opacus ISO-5 is a mesophilic bacterium that was isolated from sludge from sewage treatment plant.
NCBI tax id
- NCBI tax id: 37919
- Matching level: species
strain history
- @ref: 11915
- history: <- D. Schleheck, Univ. Konstanz; ISO-5
doi: 10.13145/bacdive11018.20241212.9.2
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/actinomycetota
- domain: Bacteria
- phylum: Actinomycetota
- class: Actinomycetes
- order: Mycobacteriales
- family: Nocardiaceae
- genus: Rhodococcus
- species: Rhodococcus opacus
- full scientific name: Rhodococcus opacus Klatte et al. 1995
synonyms
@ref synonym 20215 Rhodococcus percolatus 20215 Rhodococcus imtechensis
@ref: 11915
domain: Bacteria
phylum: Actinobacteria
class: Actinobacteria
order: Actinomycetales
family: Nocardiaceae
genus: Rhodococcus
species: Rhodococcus opacus
full scientific name: Rhodococcus opacus Klatte et al. 1995
strain designation: ISO-5
type strain: no
Culture and growth conditions
culture medium
- @ref: 11915
- name: TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535)
- growth: yes
- link: https://mediadive.dsmz.de/medium/535
- composition: Name: TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Distilled water
culture temp
- @ref: 11915
- growth: positive
- type: growth
- temperature: 28
Isolation, sampling and environmental information
isolation
- @ref: 11915
- sample type: sludge from sewage treatment plant
- geographic location: Ludwigshafen
- country: Germany
- origin.country: DEU
- continent: Europe
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Engineered | #Waste | #Water treatment plant |
| #Environmental | #Terrestrial | #Mud (Sludge) |
Safety information
risk assessment
- @ref: 11915
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
External links
@ref: 11915
culture collection no.: DSM 44600
straininfo link
- @ref: 80272
- straininfo: 113682
literature
| topic | Pubmed-ID | title | authors | journal | DOI | year | mesh | topic2 |
|---|---|---|---|---|---|---|---|---|
| Metabolism | 12571015 | Desulfonation and degradation of the disulfodiphenylethercarboxylates from linear alkyldiphenyletherdisulfonate surfactants. | Schleheck D, Lechner M, Schonenberger R, Suter MJ, Cook AM | Appl Environ Microbiol | 10.1128/AEM.69.2.938-944.2003 | 2003 | Alkanesulfonic Acids/*metabolism, Biodegradation, Environmental, Chromatography, High Pressure Liquid, Culture Media, Mass Spectrometry/methods, Phenyl Ethers/*metabolism, Rhodococcus/isolation & purification/*metabolism, Sewage/microbiology, Sulfur/*metabolism, Surface-Active Agents/*metabolism | Cultivation |
| Metabolism | 15184572 | Rhodococcus opacus expresses the xsc gene to utilize taurine as a carbon source or as a nitrogen source but not as a sulfur source. | Denger K, Ruff J, Schleheck D, Cook AM | Microbiology (Reading) | 10.1099/mic.0.27077-0 | 2004 | Acetaldehyde/*analogs & derivatives/*metabolism, Acetyltransferases/*genetics/metabolism, Bacterial Proteins/genetics/metabolism, Carbon/*metabolism, Gene Expression Regulation, Bacterial, Molecular Sequence Data, Nitrogen/*metabolism, Rhodococcus/*enzymology/genetics/growth & development, Sequence Analysis, DNA, Sulfur/*metabolism, Taurine/*metabolism | Genetics |
Reference
| @id | authors | catalogue | doi/url | title |
|---|---|---|---|---|
| 11915 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 44600) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-44600 | |
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |
| 80272 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID113682.1 | StrainInfo: A central database for resolving microbial strain identifiers |