Strain identifier
BacDive ID: 10670
Type strain: 
Species: Nocardia farcinica
Strain Designation: 844, GA 880 (N 119), N 705
Strain history: <- M. Ridell, GA 880 (N 119) <- M. Goodfellow, N 705 <- M. Magnusson, 844
NCBI tax ID(s): 37329 (species)
General
@ref: 11232
BacDive-ID: 10670
DSM-Number: 43668
keywords: 16S sequence, Bacteria, mesophilic, human pathogen
description: Nocardia farcinica 844 is a mesophilic human pathogen that was isolated from case of nocardiosis.
NCBI tax id
- NCBI tax id: 37329
- Matching level: species
strain history
- @ref: 11232
- history: <- M. Ridell, GA 880 (N 119) <- M. Goodfellow, N 705 <- M. Magnusson, 844
doi: 10.13145/bacdive10670.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/actinomycetota
- domain: Bacteria
- phylum: Actinomycetota
- class: Actinomycetes
- order: Mycobacteriales
- family: Nocardiaceae
- genus: Nocardia
- species: Nocardia farcinica
- full scientific name: Nocardia farcinica Trevisan 1889 (Approved Lists 1980)
@ref: 11232
domain: Bacteria
phylum: Actinobacteria
class: Actinobacteria
order: Actinomycetales
family: Nocardiaceae
genus: Nocardia
species: Nocardia farcinica
full scientific name: Nocardia farcinica Trevisan 1889 emend. Nouioui et al. 2018
strain designation: 844, GA 880 (N 119), N 705
type strain: no
Culture and growth conditions
culture medium
- @ref: 11232
- name: MYCOBACTERIUM MEDIUM (DSMZ Medium 219)
- growth: yes
- link: https://mediadive.dsmz.de/medium/219
- composition: Name: MYCOBACTERIUM MEDIUM (DSMZ Medium 219) Composition: Agar 20.0 g/l Na2HPO4 x 12 H2O 2.5 g/l Yeast extract 2.0 g/l Proteose peptone no. 3 2.0 g/l Casein peptone 2.0 g/l Sodium citrate 1.5 g/l KH2PO4 1.0 g/l MgSO4 x 7 H2O 0.6 g/l Tween 0.5 g/l Glycerol Distilled water
culture temp
- @ref: 11232
- growth: positive
- type: growth
- temperature: 37
- range: mesophilic
Isolation, sampling and environmental information
isolation
- @ref: 11232
- sample type: case of nocardiosis
- country: Sweden
- origin.country: SWE
- continent: Europe
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Infection | #Disease | |
| #Host | #Microbial | #Bacteria |
| #Host Body-Site |
Safety information
risk assessment
- @ref: 11232
- pathogenicity human: yes
- pathogenicity animal: yes
- biosafety level: 2
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
- @ref: 20218
- description: Nocardia farcinica strain DSM 43668 16S-23S ribosomal RNA intergenic spacer, complete sequence
- accession: AF536447
- length: 332
- database: ena
- NCBI tax ID: 37329
External links
@ref: 11232
culture collection no.: DSM 43668
straininfo link
- @ref: 79940
- straininfo: 50401
Reference
| @id | authors | catalogue | doi/url | title | journal | pubmed |
|---|---|---|---|---|---|---|
| 11232 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 43668) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-43668 | |||
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |||
| 20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P. | 10.1016/j.syapm.2013.11.002 | StrainInfo introduces electronic passports for microorganisms. | Syst Appl Microbiol. 37: 42-50 2014 | 24321274 | |
| 79940 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID50401.1 | StrainInfo: A central database for resolving microbial strain identifiers |