Strain identifier

BacDive ID: 10640

Type strain: Yes

Species: Nocardia asteroides

Strain Designation: 727, GA 875, M 170-6, M170-6

Strain history: CIP <- 1995, JCM <- CCM <- M.P. Lechevalier: strain 727 <- R.E. Gordon: 727 <- L. Ajello: strain M170-6 <- W.M. Bowman: strain PSA 165

NCBI tax ID(s): 1110697 (strain), 1824 (species)

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General

@ref: 11179

BacDive-ID: 10640

DSM-Number: 43757

keywords: genome sequence, 16S sequence, Bacteria, aerobe, spore-forming, mesophilic, human pathogen

description: Nocardia asteroides 727 is an aerobe, spore-forming, mesophilic human pathogen of the family Nocardiaceae.

NCBI tax id

NCBI tax idMatching level
1824species
1110697strain

strain history

@refhistory
11179<- M. Ridell, GA 875 <- ATCC <- R.E. Gordon, 727 <- L. Ajello, M 170-6 <- W. Bowman, PSA 165
67770CCM 2754 <-- M. P. Lechevalier 727 <-- R. E. Gordon 727 <-- L. Ajello M170-6 <-- W. M. Bowman PSA 165.
116531CIP <- 1995, JCM <- CCM <- M.P. Lechevalier: strain 727 <- R.E. Gordon: 727 <- L. Ajello: strain M170-6 <- W.M. Bowman: strain PSA 165

doi: 10.13145/bacdive10640.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinomycetota
  • domain: Bacteria
  • phylum: Actinomycetota
  • class: Actinomycetes
  • order: Mycobacteriales
  • family: Nocardiaceae
  • genus: Nocardia
  • species: Nocardia asteroides
  • full scientific name: Nocardia asteroides (Eppinger 1891) Blanchard 1896 (Approved Lists 1980)

  • synonyms

    • @ref: 20215
    • synonym: Cladothrix asteroides

@ref: 11179

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Actinomycetales

family: Nocardiaceae

genus: Nocardia

species: Nocardia asteroides

full scientific name: Nocardia asteroides (Eppinger 1891) Blanchard 1896 emend. Nouioui et al. 2018

strain designation: 727, GA 875, M 170-6, M170-6

type strain: yes

Morphology

cell morphology

@refmotilityconfidencegram staincell shape
69480no97.765
69480100positive
116531nopositiverod-shaped

colony morphology

  • @ref: 116531

multimedia

  • @ref: 11179
  • multimedia content: https://www.dsmz.de/microorganisms/photos/DSM_43757.jpg
  • caption: Medium 553 28°C
  • intellectual property rights: © Leibniz-Institut DSMZ

Culture and growth conditions

culture medium

@refnamegrowthlinkcomposition
11179GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)yeshttps://mediadive.dsmz.de/medium/65Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water
35685MEDIUM 3 - Columbia agaryesColumbia agar (39.000 g);distilled water (1000.000 ml)
116531CIP Medium 3yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=3

culture temp

@refgrowthtypetemperaturerange
11179positivegrowth28mesophilic
35685positivegrowth30mesophilic
45262positivegrowth30-37mesophilic
67770positivegrowth28mesophilic
116531positivegrowth10-37
116531nogrowth45thermophilic

Physiology and metabolism

oxygen tolerance

@refoxygen tolerance
45262aerobe
116531obligate aerobe

spore formation

@refspore formationconfidence
69481yes100
69480no99.216

halophily

@refsaltgrowthtested relationconcentration
116531NaClpositivegrowth0-4 %
116531NaClnogrowth6 %
116531NaClnogrowth8 %
116531NaClnogrowth10 %

observation

  • @ref: 67770
  • observation: quinones: MK-8(H4), MK-8(II,III-H4, ω-cycl)

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
11653116947citrate-carbon source
1165314853esculin+hydrolysis
116531606565hippurate-hydrolysis
11653117632nitrate+reduction
11653116301nitrite-reduction
11653117632nitrate-respiration
6837917632nitrate+reduction
683794853esculin+hydrolysis
683795291gelatin-hydrolysis
6837917634D-glucose-fermentation
6837916988D-ribose-fermentation
6837965327D-xylose-fermentation
6837916899D-mannitol-fermentation
6837917306maltose-fermentation
6837917716lactose-fermentation
6837917992sucrose-fermentation
6837928087glycogen-fermentation

metabolite production

  • @ref: 116531
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

metabolite tests

  • @ref: 116531
  • Chebi-ID: 15688
  • metabolite: acetoin
  • voges-proskauer-test: -

enzymes

@refvalueactivityec
68379gelatinase-
68379beta-glucosidase+3.2.1.21
68379N-acetyl-beta-glucosaminidase-3.2.1.52
68379alpha-glucosidase+3.2.1.20
68379beta-galactosidase-3.2.1.23
68379beta-glucuronidase-3.2.1.31
68379alkaline phosphatase+3.1.3.1
68379pyrrolidonyl arylamidase-3.4.19.3
116531oxidase-
116531beta-galactosidase+3.2.1.23
116531alcohol dehydrogenase-1.1.1.1
116531gelatinase-
116531amylase-
116531DNase-
116531caseinase-3.4.21.50
116531catalase+1.11.1.6
116531tween esterase-
116531gamma-glutamyltransferase-2.3.2.2
116531lecithinase-
116531lysine decarboxylase-4.1.1.18
116531ornithine decarboxylase-4.1.1.17
116531urease+3.5.1.5
68382alkaline phosphatase+3.1.3.1
68382esterase (C 4)+
68382esterase lipase (C 8)+
68382lipase (C 14)-
68382leucine arylamidase+3.4.11.1
68382valine arylamidase-
68382cystine arylamidase-3.4.11.3
68382trypsin+3.4.21.4
68382alpha-chymotrypsin-3.4.21.1
68382acid phosphatase+3.1.3.2
68382naphthol-AS-BI-phosphohydrolase+
68382alpha-galactosidase-3.2.1.22
68382beta-galactosidase+3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase+3.2.1.20
68382beta-glucosidase+3.2.1.21
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382alpha-mannosidase-3.2.1.24
68382alpha-fucosidase-3.2.1.51

API coryne

@refNITPYZPYRAPALbeta GURbeta GALalpha GLUbeta NAGESCUREGELControlGLURIBXYLMANMALLACSACGLYG
11179++/--+--+-++/-----------

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
116531-+++-+--+-++-+-++---

API biotype100

@refGLUFRUGALTREMNESBEMELSACRAFMTEMALLACLTEMbGaMaGaCELGENMbGuESCRIBARAXYLPLERHAFUCMLZDARLLARLXLTDULTAGGLYINOMANMTLTURSORADOHBGLYXERYMDG3MDGSATMUCLTATDTATMTATDMLTLMLTCATETATETTECITGRTGAT2KG5KGTRYNAGGNTPACPATpOBEQATGTEmOBEBATPPATCMTTGEBETPCEABTHINLATCAPCYTHISSUCFUMGREGYTAVTETNTTNGLNITA3OBUAPTGTTPRODALALALASERMNTPROPTYR2KT
116531++-----------+-----------------+------------------------------------------++--------+---+--+----+--

Isolation, sampling and environmental information

taxonmaps

  • @ref: 69479
  • File name: preview.99_825.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_10;96_243;97_280;98_507;99_825&stattab=map
  • Last taxonomy: Nocardia
  • 16S sequence: X80606
  • Sequence Identity:
  • Total samples: 542
  • soil counts: 198
  • aquatic counts: 84
  • animal counts: 206
  • plant counts: 54

Safety information

risk assessment

@refpathogenicity humanpathogenicity animalbiosafety levelbiosafety level comment
11179yesyes2Risk group (German classification)
1165312Risk group (French classification)

Sequence information

16S sequences

@refdescriptionaccessionlengthdatabaseNCBI tax ID
20218Nocardia asteroides strain ATCC 19247 16S ribosomal RNA gene, partial sequenceAY505492500ena1110697
20218Nocardia asteroides strain ATCC 19247 16S ribosomal RNA gene, partial sequenceAY756541606ena1110697
20218Nocardia asteroides strain ATCC 19247 16S ribosomal RNA gene, partial sequenceDQ6598981434ena1110697
20218Nocardia asteroides NBRC 15531 16S ribosomal RNA gene, partial sequenceGQ3761611439ena1110697
20218Nocardia asteroides strain ATCC 19247 clone 1 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequenceGU236326625ena1110697
20218Nocardia asteroides strain ATCC 19247 clone 2 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequenceGU236327625ena1110697
20218Nocardia asteroides strain ATCC 19247 clone 3 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequenceGU236328625ena1110697
20218Nocardia asteroides strain ATCC 19247 clone 4 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequenceGU236329634ena1110697
20218Nocardia asteroides strain ATCC 19247 clone 5 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequenceGU236330627ena1110697
20218Nocardia asteroides strain ATCC 19247 clone 6 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequenceGU236331627ena1110697
20218Nocardia asteroides NBRC 15531 strain ATCC 19247 16S ribosomal RNA gene, partial sequenceJN041459462ena1110697
20218Nocardia asteroides NBRC 15531 isolate PCH16S-001 16S ribosomal RNA gene, partial sequenceJN562377822ena1110697
20218N.asteroides 16S rRNA gene (ATCC 19247T)X848501412ena1110697
20218N.asteroides gene for 16S ribosomal RNAZ369341472ena1824
20218Nocardia asteroides strain DSM 43757 note copy 1 rrnB operon, partial sequence; and 16S-23S ribosomal RNA intergenic spacer, complete sequenceAF536393321ena1110697
20218Nocardia asteroides strain DSM 43757 note copy 2 rrnA operon, partial sequence; and 16S-23S ribosomal RNA intergenic spacer, complete sequenceAF536394323ena1110697
20218Nocardia asteroides strain DSM 43757 note copy 3 16S-23S ribosomal RNA intergenic spacer, complete sequenceAF536395330ena1110697
20218Nocardia asteroides 16S rRNA gene, strain DSM43757TX806061471ena1110697
11179Nocardia asteroides NBRC 15531 strain DSM 43757 16S ribosomal RNA gene, complete sequenceAF4300191492ena1110697

Genome sequences

@refdescriptionaccessionassembly leveldatabaseNCBI tax ID
66792Nocardia asteroides NCTC11293GCA_900637185completencbi1824
66792Nocardia asteroides NBRC 155311110697.4wgspatric1110697
66792Nocardia asteroides NBRC 15531 strain ATCC 192471110697.7wgspatric1110697
66792Nocardia asteroides strain DSM 433731824.9wgspatric1824
66792Nocardia asteroides strain NCTC112931824.7completepatric1824
66792Nocardia asteroides DSM 433732693429866draftimg1824
66792Nocardia asteroides NBRC 155312563367075draftimg1110697
67770Nocardia asteroides NBRC 15531GCA_000308355contigncbi1110697
67770Nocardia asteroides DSM 43373GCA_900114685contigncbi1824
67770Nocardia asteroides NBRC 15531 ATCC 19247GCA_005863255contigncbi1110697

GC content

@refGC-contentmethod
6777069.9genome sequence analysis
6777074.6thermal denaturation, midpoint method (Tm)
6777070.3thermal denaturation, midpoint method (Tm)
6777069high performance liquid chromatography (HPLC)

Genome-based predictions

predictions

traitpredictionconfidencetraining_data
spore-formingyes100no
flagellatedno97.285no
gram-positiveyes89.638no
anaerobicno99.466no
aerobicyes91.671yes
halophileno92.185no
spore-formingyes81.004no
thermophileno99.343yes
glucose-utilyes90.18no
motileno93.882no
glucose-fermentno92.039yes

External links

@ref: 11179

culture collection no.: DSM 43757, ATCC 19247, CCM 2754, DSM 43373, IMET 7547, JCM 3384, NCTC 11293, CCUG 10073, PSA 165, CECT 3051, CGMCC 4.1165, CIP 104503, HUT 6572, IFM 0319, IFO 15531, KCTC 9956, MTCC 274, NBRC 15531, NCAIM B.01954, NCIMB 12082, NRRL B-3828, PCM 2254

straininfo link

  • @ref: 79911
  • straininfo: 319101

literature

Pubmed-IDtitleauthorsjournalyearmeshtopicDOItopic2
749777Immunogenicity of methyl esters of nocardomycolic acids.Mordarska HArch Immunol Ther Exp (Warsz)1978Animals, Antibodies, Bacterial/biosynthesis, Methylation, Mycolic Acids/*immunology, Nocardia/*immunology, Rabbits, Rhodospirillum/genetics
6798166Immunodiffusion studies of some Nocardia strains.Ridell MJ Gen Microbiol1981Antigens, Bacterial/classification, Immunodiffusion, Nocardia/*classification/immunology, Nocardia asteroides/classification/immunologyPhylogeny10.1099/00221287-123-1-69
8573505Nocardia pseudobrasiliensis sp. nov., a new species of Nocardia which groups bacterial strains previously identified as Nocardia brasiliensis and associated with invasive diseases.Ruimy R, Riegel P, Carlotti A, Boiron P, Bernardin G, Monteil H, Wallace RJ Jr, Christen RInt J Syst Bacteriol1996DNA, Bacterial/genetics, DNA, Ribosomal/genetics, Molecular Sequence Data, Nocardia/chemistry/*classification/genetics/metabolism, Nocardia Infections/*microbiology, Nucleic Acid Hybridization, PhylogenyPhylogeny10.1099/00207713-46-1-259Genetics
8727879Ribotyping: a tool for taxonomy and identification of the Nocardia asteroides complex species.Laurent F, Carlotti A, Boiron P, Villard J, Freney JJ Clin Microbiol1996*Bacterial Typing Techniques, Base Sequence, DNA Primers/genetics, DNA, Bacterial/genetics, DNA, Ribosomal/genetics, Humans, Molecular Sequence Data, Nocardia/classification/genetics, Nocardia asteroides/*classification/*genetics, Polymerase Chain Reaction, Polymorphism, Restriction Fragment Length, RNA, Bacterial/genetics, RNA, Ribosomal, 16S/genetics, Species SpecificityPhylogeny10.1128/jcm.34.5.1079-1082.1996Pathogenicity
10319509Nocardia salmonicida nom. rev., a fish pathogen.Isik K, Chun J, Hah YC, Goodfellow MInt J Syst Bacteriol1999Animals, DNA, Bacterial/chemistry/genetics, DNA, Ribosomal/chemistry/genetics, Fish Diseases/*microbiology, Genes, rRNA, Molecular Sequence Data, Nocardia/*classification/genetics/isolation & purification/physiology, Nocardia Infections/microbiology/*veterinary, Oncorhynchus/*microbiology, Phenotype, RNA, Ribosomal, 16S/geneticsPhylogeny10.1099/00207713-49-2-833Genetics
10939654Nocardia abscessus sp. nov.Yassin AF, Rainey FA, Mendrock U, Brzezinka H, Schaal KPInt J Syst Evol Microbiol2000Adult, Cloning, Molecular, DNA, Bacterial/genetics, Genes, Bacterial, Humans, Male, Middle Aged, Molecular Sequence Data, Nocardia/chemistry/*classification/genetics, Nucleic Acid Hybridization, Phylogeny, RNA, Bacterial/analysis, RNA, Ribosomal, 16S/analysisPhylogeny10.1099/00207713-50-4-1487Enzymology
11576791Evaluation of E test, disk diffusion and broth microdilution to establish tentative quality control limits and review susceptibility breakpoints for two aerobic actinomycetes.Tomlin P, Sand C, Rennie RPDiagn Microbiol Infect Dis2001Aerobiosis, Culture Media, Diffusion, Microbial Sensitivity Tests/*methods/standards, Nocardia/*drug effects, Quality Control, Reproducibility of Results, Rhodococcus/*drug effectsCultivation10.1016/s0732-8893(01)00273-5Pathogenicity
12892117Nocardia caishijiensis sp. nov., a novel soil actinomycete.Zhang J, Liu Z, Goodfellow MInt J Syst Evol Microbiol2003DNA, Bacterial/genetics, DNA, Ribosomal/genetics, Molecular Sequence Data, Nocardia/*classification/genetics/*isolation & purification/metabolism, Phenotype, Phylogeny, RNA, Bacterial/genetics, RNA, Ribosomal, 16S/genetics, *Soil MicrobiologyPhylogeny10.1099/ijs.0.02397-0Genetics
16569850Contribution of rpoB2 RNA polymerase beta subunit gene to rifampin resistance in Nocardia species.Ishikawa J, Chiba K, Kurita H, Satoh HAntimicrob Agents Chemother2006Amino Acid Sequence, Binding Sites, DNA-Directed RNA Polymerases/*genetics, Drug Resistance, Bacterial, Gene Duplication, Molecular Sequence Data, Nocardia/*drug effects/enzymology/genetics, Rifampin/*pharmacologyGenetics10.1128/AAC.50.4.1342-1346.2006Enzymology
18003809Nocardia cyriacigeorgica, an emerging pathogen in the United States.Schlaberg R, Huard RC, Della-Latta PJ Clin Microbiol2007Adult, Aged, Anti-Bacterial Agents/pharmacology, DNA, Bacterial/chemistry/genetics, DNA, Ribosomal/chemistry/genetics, Female, Genes, Bacterial/genetics, Genes, rRNA, Humans, Male, Microbial Sensitivity Tests, Middle Aged, Molecular Epidemiology, Molecular Sequence Data, New York City/epidemiology, Nocardia/drug effects/genetics/*isolation & purification, Nocardia Infections/*epidemiology/*microbiology, Nocardia asteroides/drug effects, Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, Sequence Homology, Nucleic AcidPathogenicity10.1128/JCM.00937-07Phylogeny
24884595Genome based analysis of type-I polyketide synthase and nonribosomal peptide synthetase gene clusters in seven strains of five representative Nocardia species.Komaki H, Ichikawa N, Hosoyama A, Takahashi-Nakaguchi A, Matsuzawa T, Suzuki K, Fujita N, Gonoi TBMC Genomics2014Molecular Sequence Data, *Multigene Family, Nocardia/classification/*enzymology, Polyketide Synthases/*genetics, Species SpecificityPhylogeny10.1186/1471-2164-15-323Genetics
25896308Nocardia rhizosphaerae sp. nov., a novel actinomycete isolated from the coastal rhizosphere of Artemisia Linn., China.Wang Y, Liu W, Feng WW, Zhou XQ, Bai JL, Yuan B, Ju XY, Cao CL, Huang Y, Jiang JH, Lv AJ, Qin SAntonie Van Leeuwenhoek2015Artemisia/growth & development, Bacterial Typing Techniques, Base Composition, Carbohydrates/analysis, Cell Wall/chemistry, China, Cluster Analysis, Cytosol/chemistry, DNA, Bacterial/chemistry/genetics, DNA, Ribosomal/chemistry/genetics, Diaminopimelic Acid/analysis, Fatty Acids/analysis, Microscopy, Electron, Scanning, Molecular Sequence Data, Nocardia/*classification/genetics/*isolation & purification/physiology, Nucleic Acid Hybridization, Peptidoglycan/analysis, Phospholipids/analysis, Phylogeny, RNA, Ribosomal, 16S/genetics, *Rhizosphere, Sequence Analysis, DNA, *Soil Microbiology, Vitamin K 2/analysisPhylogeny10.1007/s10482-015-0460-0Genetics
29125460Nocardia rhizosphaerihabitans sp. nov., a novel actinomycete isolated from a coastal soil.Ding P, Bai JL, Wang TT, Sun Y, Cao CL, Jiang JH, Qin SInt J Syst Evol Microbiol2017Bacterial Typing Techniques, Base Composition, China, DNA, Bacterial/genetics, Diaminopimelic Acid/chemistry, Fatty Acids/chemistry, Lycium/*microbiology, Nocardia/*classification/genetics/isolation & purification, Nucleic Acid Hybridization, Phospholipids/chemistry, *Phylogeny, RNA, Ribosomal, 16S/genetics, *Rhizosphere, Sequence Analysis, DNA, *Soil Microbiology, Vitamin K 2/analogs & derivatives/chemistryPhylogeny10.1099/ijsem.0.002481Transcriptome
31416867Genome Sequences of Three Nocardia cyriacigeorgica Strains and One Nocardia asteroides Strain.Vautrin F, Bergeron E, Dubost A, Abrouk D, Martin C, Cournoyer B, Louzier V, Winiarski T, Rodriguez-Nava V, Pujic PMicrobiol Resour Announc2019Genetics10.1128/MRA.00600-19

Reference

@idauthorscataloguedoi/urltitlejournalpubmed
11179Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 43757)https://www.dsmz.de/collection/catalogue/details/culture/DSM-43757
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
20218Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.10.1016/j.syapm.2013.11.002StrainInfo introduces electronic passports for microorganisms.Syst Appl Microbiol. 37: 42-50 201424321274
35685Curators of the CIPhttps://brclims.pasteur.fr/brcWeb/souche/detail/1/16418
45262Curators of the CCUGCulture Collection University of Gothenburg (CCUG) (CCUG 10073)https://www.ccug.se/strain?id=10073
66792Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmannhttps://diaspora-project.de/progress.html#genomesAutomatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)
66794Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg10.1093/nar/gkaa1025BRENDA, the ELIXIR core data resource in 2021: new developments and updatesNucleic Acids Res. 49: D498-D508 202033211880
67770Curators of the JCMhttps://jcm.brc.riken.jp/en/
68379Automatically annotated from API Coryne
68382Automatically annotated from API zym
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.https://microbeatlas.org/MicrobeAtlas 1.0 beta
69480Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmannhttps://diaspora-project.de/progress.html#genomesPredictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)
69481Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch10.21203/rs.3.rs-2527258/v1Predictions based on the model GenomeNet Sporulation v. 1
79911Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID319101.1StrainInfo: A central database for resolving microbial strain identifiers
116531Curators of the CIPCollection of Institut Pasteur (CIP 104503)https://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20104503