Strain identifier

BacDive ID: 10489

Type strain: Yes

Species: Neisseria macacae

Strain Designation: M-740, W1

Strain history: CIP <- 1989, M.J. Barrett, Leicester Univ., UK: strain W1 <- N.A. Vedros: strain M-740

NCBI tax ID(s): 997348 (strain), 496 (species)

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General

@ref: 7948

BacDive-ID: 10489

DSM-Number: 19175

keywords: genome sequence, 16S sequence, Bacteria, aerobe, mesophilic, Gram-negative

description: Neisseria macacae M-740 is an aerobe, mesophilic, Gram-negative bacterium that was isolated from oropharynx of Rhesus monkey.

NCBI tax id

NCBI tax idMatching level
496species
997348strain

strain history

@refhistory
7948<- CIP <- M. J. Barrett <- N. A. Vedros; M-740
120728CIP <- 1989, M.J. Barrett, Leicester Univ., UK: strain W1 <- N.A. Vedros: strain M-740

doi: 10.13145/bacdive10489.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Betaproteobacteria
  • order: Neisseriales
  • family: Neisseriaceae
  • genus: Neisseria
  • species: Neisseria macacae
  • full scientific name: Neisseria macacae Vedros et al. 1983

@ref: 7948

domain: Bacteria

phylum: Proteobacteria

class: Betaproteobacteria

order: Neisseriales

family: Neisseriaceae

genus: Neisseria

species: Neisseria macacae

full scientific name: Neisseria macacae Vedros et al. 1983

strain designation: M-740, W1

type strain: yes

Morphology

cell morphology

  • @ref: 69480
  • gram stain: negative
  • confidence: 99.985

Culture and growth conditions

culture medium

@refnamegrowthlinkcomposition
7948COLUMBIA BLOOD AGAR (DSMZ Medium 429)yeshttps://mediadive.dsmz.de/medium/429Name: COLUMBIA BLOOD AGAR (DSMZ Medium 429) Composition: Horse blood 40.0 g/l Columbia agar base
40612MEDIUM 6 - Columbia agar with 10 % horse bloodyesDistilled water make up to (1000.000 ml);Columbia agar (39.000 g);Horseblood (100.000 ml)
120728CIP Medium 6yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=6

culture temp

@refgrowthtypetemperaturerange
7948positivegrowth37mesophilic
40612positivegrowth30mesophilic
55081positivegrowth33-42

Physiology and metabolism

oxygen tolerance

  • @ref: 55081
  • oxygen tolerance: aerobe

spore formation

  • @ref: 69480
  • spore formation: no
  • confidence: 99.999

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6837717634D-glucose+builds acid from
6837715824D-fructose+builds acid from
6837717306maltose+builds acid from
6837718257ornithine-degradation
6837716199urea-hydrolysis
6837727897tryptophan-energy source

metabolite production

  • @ref: 68377
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

metabolite tests

  • @ref: 68377
  • Chebi-ID: 35581
  • metabolite: indole
  • indole test: -

enzymes

@refvalueactivityec
68377tryptophan deaminase-4.1.99.1
68377proline-arylamidase+3.4.11.5
68377alkaline phosphatase-3.1.3.1
68377lipase-
68377urease-3.5.1.5
68377ornithine decarboxylase-4.1.1.17

API NH

@refPENGLUFRUMALSACODCURELIPPALbeta GALProAGGTIND
7948++++-----++--
7948-++++-----++-

Isolation, sampling and environmental information

isolation

@refsample type
7948oropharynx of Rhesus monkey
55081Rhesus monkey oropharynx
120728Animal, Oropharynx of Rhesus monkey, Macaca mulatta

isolation source categories

Cat1Cat2Cat3
#Host#Mammals#Primates
#Host Body-Site#Oral cavity and airways

Safety information

risk assessment

@refbiosafety levelbiosafety level comment
79481Risk group (German classification)
1207281Risk group (French classification)

Sequence information

16S sequences

@refdescriptionaccessionlengthdatabaseNCBI tax ID
20218Neisseria macaca 16S ribosomal RNAL061691473ena997348
7948Neisseria macacae 16S rRNA gene, partialAJ247243457ena997348

Genome sequences

@refdescriptionaccessionassembly leveldatabaseNCBI tax ID
66792Neisseria macacae ATCC 33926997348.4wgspatric997348
66792Neisseria macacae ATCC 33926651324075draftimg997348
66792Neisseria macacae ATCC 33926GCA_022749495completencbi997348

Genome-based predictions

predictions

traitpredictionconfidencetraining_data
spore-formingno83no
flagellatedno91.767no
gram-positiveno98.452no
anaerobicno97.604yes
aerobicno96.054no
halophileno78.503no
spore-formingno96.985no
motileno87.293no
glucose-fermentno84.751no
thermophileno99.571yes
glucose-utilyes66.388no

External links

@ref: 7948

culture collection no.: DSM 19175, ATCC 33926, CCUG 41451, CIP 103346, CCUG 24962

straininfo link

  • @ref: 79766
  • straininfo: 40767

Reference

@idauthorscataloguedoi/urltitlejournalpubmed
7948Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 19175)https://www.dsmz.de/collection/catalogue/details/culture/DSM-19175
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
20218Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.10.1016/j.syapm.2013.11.002StrainInfo introduces electronic passports for microorganisms.Syst Appl Microbiol. 37: 42-50 201424321274
40612Curators of the CIPhttps://brclims.pasteur.fr/brcWeb/souche/detail/1/15133
55081Curators of the CCUGCulture Collection University of Gothenburg (CCUG) (CCUG 41451)https://www.ccug.se/strain?id=41451
66792Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmannhttps://diaspora-project.de/progress.html#genomesAutomatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)
68377Automatically annotated from API NH
69480Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmannhttps://diaspora-project.de/progress.html#genomesPredictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)
79766Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID40767.1StrainInfo: A central database for resolving microbial strain identifiers
120728Curators of the CIPCollection of Institut Pasteur (CIP 103346)https://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20103346