Name: Aureimonas ureilytica 5715S-12
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 533

Type strain:

Species: Aureimonas ureilytica

Strain Designation: 5715S-12

Culture col. no.: DSM 18598, CIP 109815, KACC 11607

Strain history: CIP <- 2008, DSMZ <- S.W. Kwon, KACC, Suwon, Korea: strain 5715S-12

NCBI tax ID(s): 1121028 (strain), 401562 (species)

SI-ID 309430

DSM 18598, KACC 11607, CIP 109815

Section

Aureimonas ureilytica 5715S-12 is an anaerobe, mesophilic, Gram-negative bacterium that was isolated from air sample.

Gram-negative
motile
rod-shaped
anaerobe
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Alphaproteobacteria*
	Order	*Hyphomicrobiales*
	Family	*Aurantimonadaceae*
	Genus	*Aureimonas*
	Species	**Aureimonas ureilytica**
	Full Scientific Name (LPSN)	Aureimonas ureilytica (Weon et al. 2007) Rathsack et al. 2011

Synonym

Aurantimonas ureilytica

Information on morphological and physiological properties Morphology

[Ref.: #23135]	Gram stain	negative
[Ref.: #123742]	Gram stain	negative
[Ref.: #69480]	Gram stain	negative Confidence in %99.962

[Ref.: #23135]	Cell length	1.0-1.5 µm

[Ref.: #23135]	Cell width	0.4-1.3 µm

[Ref.: #23135]	Cell shape	rod-shaped
[Ref.: #123742]	Cell shape	oval-shaped

[Ref.: #23135]	Motility	yes
[Ref.: #123742]	Motility	no

[Ref.: #23135]	Incubation period	5 days
[Ref.: #23135]	Cultivation medium used	R2A medium

Information on culture and growth conditions Culture and growth conditions

[Ref.: #7601]

Culture medium

R2A MEDIUM (DSMZ Medium 830)

[Ref.: #7601]

Culture medium growth

[Ref.: #7601]

Culture medium link

Medium recipe at MediaDive

[Ref.: #7601]

Culture medium composition

expand / minimize

[Ref.: #23135]

Culture medium

R2A medium

[Ref.: #23135]

Culture medium growth

[Ref.: #37853]

Culture medium

MEDIUM 72- for trypto casein soja agar

[Ref.: #37853]

Culture medium growth

[Ref.: #37853]

Culture medium composition

expand / minimize

[Ref.: #123742]

Culture medium

CIP Medium 72

[Ref.: #123742]

Culture medium growth

[Ref.: #123742]

Culture medium link

Medium recipe provided by DSMZ

[Ref.: #123742]

Culture medium

CIP Medium 372

[Ref.: #123742]

Culture medium growth

[Ref.: #123742]

Culture medium link

Medium recipe provided by DSMZ

		Temperature
[Ref.: #7601]	growth	28 °C
[Ref.: #23135]	maximum	37 °C
[Ref.: #23135]	minimum	4 °C
[Ref.: #23135]	optimum	25-30 °C
[Ref.: #37853]	growth	30 °C

[Ref.: #7601]	Temperature range	mesophilic
[Ref.: #23135]	Temperature range	mesophilic
[Ref.: #23135]	Temperature range	psychrophilic
[Ref.: #23135]	Temperature range	mesophilic
[Ref.: #37853]	Temperature range	mesophilic

		pH
[Ref.: #23135]	maximum	9.0
[Ref.: #23135]	minimum	4.0
[Ref.: #23135]	optimum	7-8

Information on physiology and metabolism Physiology and metabolism

[Ref.: #23135]	Oxygen tolerance	anaerobe
[Ref.: #123742]	Oxygen tolerance	obligate aerobe

[Ref.: #69481]	Ability of spore formation	no Confidence in %100
[Ref.: #69480]	Ability of spore formation	no Confidence in %99.997

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #23135]		NaCl		optimum	0-3	%
[Ref.: #23135]		NaCl	no	growth	10	%(w/v)

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #23357]	(-)-quinic acid ChEBI	+/-	carbon source
[Ref.: #23357]	2-hydroxybutyrate ChEBI	-	carbon source
[Ref.: #23357]	2-oxobutanoate ChEBI	-	carbon source
[Ref.: #23357]	2-oxopentanoate ChEBI	-	carbon source
[Ref.: #23357]	3-hydroxybutyrate ChEBI	+/-	carbon source
[Ref.: #23357]	4-hydroxybutyrate ChEBI	-	carbon source
[Ref.: #23357]	4-hydroxybutyrate ChEBI	+/-	carbon source
[Ref.: #23357]	acetate ChEBI	+/-	carbon source
[Ref.: #23357]	alpha-cyclodextrin ChEBI	-	carbon source
[Ref.: #23357]	alpha-lactose ChEBI	+/-	carbon source
[Ref.: #23357]	bromosuccinate ChEBI	+/-	carbon source
[Ref.: #23135]	casein	-	hydrolysis
[Ref.: #23357]	cellobiose ChEBI	+	carbon source
[Ref.: #23135]	cellulose ChEBI	-	hydrolysis
[Ref.: #23135]	chitin ChEBI	-	hydrolysis
[Ref.: #23357]	D-alanine ChEBI	-	carbon source
[Ref.: #23357]	D-arabitol ChEBI	+/-	carbon source
[Ref.: #23357]	D-fructose ChEBI	+/-	carbon source
[Ref.: #23357]	D-galactonic acid lactone ChEBI	+/-	carbon source
[Ref.: #23357]	D-galactose ChEBI	+/-	carbon source
[Ref.: #23357]	D-glucarate ChEBI	-	carbon source
[Ref.: #23357]	D-gluconate ChEBI	+/-	carbon source
[Ref.: #23357]	D-glucosaminic acid ChEBI	-	carbon source
[Ref.: #23357]	D-mannitol ChEBI	+/-	carbon source
[Ref.: #23357]	D-mannose ChEBI	+/-	carbon source
[Ref.: #23357]	D-sorbitol ChEBI	+/-	carbon source
[Ref.: #23357]	dextrin ChEBI	+/-	carbon source
[Ref.: #23357]	DL-carnitine ChEBI	-	carbon source
[Ref.: #23135]	dna ChEBI	-	hydrolysis
[Ref.: #23357]	erythritol ChEBI	+/-	carbon source
[Ref.: #23135]	esculin ChEBI	-	hydrolysis
[Ref.: #23357]	formate ChEBI	+/-	carbon source
[Ref.: #23357]	gamma-aminobutyric acid ChEBI	-	carbon source
[Ref.: #23135]	gelatin ChEBI	-	hydrolysis
[Ref.: #23357]	gentiobiose ChEBI	-	carbon source
[Ref.: #23357]	glucuronamide ChEBI	-	carbon source
[Ref.: #23357]	glycerol ChEBI	-	carbon source
[Ref.: #23357]	glycerol 3-phosphate ChEBI	-	carbon source
[Ref.: #23357]	glycogen ChEBI	-	carbon source
[Ref.: #23357]	glycyl L-aspartic acid ChEBI	-	carbon source
[Ref.: #23357]	glycyl-l-glutamate ChEBI	+/-	carbon source
[Ref.: #23357]	hydroxyproline ChEBI	+/-	carbon source
[Ref.: #23357]	itaconate ChEBI	-	carbon source
[Ref.: #23357]	L-alaninamide ChEBI	-	carbon source
[Ref.: #23357]	L-alanine ChEBI	-	carbon source
[Ref.: #23357]	L-alanylglycine ChEBI	+/-	carbon source
[Ref.: #23357]	L-arabinose ChEBI	+/-	carbon source
[Ref.: #23357]	L-asparagine ChEBI	+/-	carbon source
[Ref.: #23357]	L-aspartate ChEBI	+/-	carbon source
[Ref.: #23357]	L-fucose ChEBI	+/-	carbon source
[Ref.: #23357]	L-glutamate ChEBI	-	carbon source
[Ref.: #23357]	L-histidine ChEBI	-	carbon source
[Ref.: #23357]	L-leucine ChEBI	-	carbon source
[Ref.: #23357]	L-ornithine ChEBI	-	carbon source
[Ref.: #23357]	L-proline ChEBI	+/-	carbon source
[Ref.: #23357]	L-pyroglutamic acid ChEBI	+/-	carbon source
[Ref.: #23357]	L-rhamnose ChEBI	+/-	carbon source
[Ref.: #23357]	L-serine ChEBI	-	carbon source
[Ref.: #23357]	L-threonine ChEBI	-	carbon source
[Ref.: #23357]	lactate ChEBI	-	carbon source
[Ref.: #23357]	maltose ChEBI	+/-	carbon source
[Ref.: #23357]	melibiose ChEBI	-	carbon source
[Ref.: #23357]	methyl alpha-D-glucopyranoside ChEBI	-	carbon source
[Ref.: #23357]	monomethyl succinate ChEBI	-	carbon source
[Ref.: #23357]	myo-inositol ChEBI	+/-	carbon source
[Ref.: #23357]	N-acetylgalactosamine ChEBI	-	carbon source
[Ref.: #23135]	nitrate ChEBI	-	reduction
[Ref.: #123742]	nitrate ChEBI	-	reduction
[Ref.: #123742]	nitrite ChEBI	-	reduction
[Ref.: #23135]	pectin ChEBI	-	hydrolysis
[Ref.: #23357]	propionate ChEBI	-	carbon source
[Ref.: #23357]	psicose ChEBI	+/-	carbon source
[Ref.: #23357]	putrescine ChEBI	-	carbon source
[Ref.: #23357]	pyruvate ChEBI	-	carbon source
[Ref.: #23357]	raffinose ChEBI	-	carbon source
[Ref.: #23357]	ribitol ChEBI	+/-	carbon source
[Ref.: #23135]	starch ChEBI	+	hydrolysis
[Ref.: #23357]	succinamate ChEBI	-	carbon source
[Ref.: #23357]	succinate ChEBI	-	carbon source
[Ref.: #23357]	succinate ChEBI	+/-	carbon source
[Ref.: #23357]	sucrose ChEBI	+/-	carbon source
[Ref.: #23357]	thymidine ChEBI	-	carbon source
[Ref.: #23135]	tryptophan ChEBI	-	energy source
[Ref.: #23357]	turanose ChEBI	-	carbon source
[Ref.: #23357]	tween 40 ChEBI	-	carbon source
[Ref.: #23135]	tween 80 ChEBI	+	hydrolysis
[Ref.: #23135]	tyrosine ChEBI	-	hydrolysis
[Ref.: #23135]	urea ChEBI	+	hydrolysis
[Ref.: #23357]	uridine ChEBI	+/-	carbon source
[Ref.: #23357]	urocanic acid ChEBI	-	carbon source
[Ref.: #23357]	xylitol ChEBI	+/-	carbon source
	Only first 10 entries are displayed. Click here to see all.

	Metabolite production	Metabolite	Production
[Ref.: #23135]		indole ChEBI	no
[Ref.: #123742]		indole ChEBI	no

	Physiological tests	Metabolite	Indole test
[Ref.: #23135]		indole ChEBI	-

	Enzyme	Enzyme activity	EC number
[Ref.: #68382]	acid phosphatase	+	3.1.3.2	* from API zym
[Ref.: #68382]	alkaline phosphatase	+	3.1.3.1	* from API zym
[Ref.: #68382]	alpha-chymotrypsin	-	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #68382]	alpha-galactosidase	-	3.2.1.22	* from API zym
[Ref.: #68382]	alpha-glucosidase	-	3.2.1.20	* from API zym
[Ref.: #68382]	alpha-mannosidase	-	3.2.1.24	* from API zym
[Ref.: #23135]	arginine dihydrolase	-	3.5.3.6
[Ref.: #68382]	beta-galactosidase	-	3.2.1.23	* from API zym
[Ref.: #68382]	beta-glucosidase	-	3.2.1.21	* from API zym
[Ref.: #68382]	beta-glucuronidase	-	3.2.1.31	* from API zym
[Ref.: #23135]	catalase	+	1.11.1.6
[Ref.: #123742]	catalase	+	1.11.1.6
[Ref.: #68382]	cystine arylamidase	-	3.4.11.3	* from API zym
[Ref.: #23135]	cytochrome oxidase	+	1.9.3.1
[Ref.: #68382]	esterase (C 4)	+		* from API zym
[Ref.: #68382]	esterase lipase (C 8)	+		* from API zym
[Ref.: #68382]	leucine arylamidase	+	3.4.11.1	* from API zym
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #68382]	N-acetyl-beta-glucosaminidase	-	3.2.1.52	* from API zym
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	+		* from API zym
[Ref.: #123742]	oxidase	+
[Ref.: #68382]	trypsin	+	3.4.21.4	* from API zym
[Ref.: #23135]	tryptophan deaminase	-	4.1.99.1
[Ref.: #123742]	urease	+	3.5.1.5
[Ref.: #68382]	valine arylamidase	-		* from API zym
	Only first 10 entries are displayed. Click here to see all.

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #123742]	12130	-	+	+	+	-	+	-	-	+	-	+	+	-	-	-	-	-	-	-	-

	Pathway	Enzyme coverage	Annotated reactions
	Pathway annotation	Computationally determined by
[Ref.: #66794]	adipate degradation	100	2 of 2
[Ref.: #66794]	C4 and CAM-carbon fixation	100	8 of 8
[Ref.: #66794]	cyanate degradation	100	3 of 3
[Ref.: #66794]	Entner Doudoroff pathway	100	10 of 10
[Ref.: #66794]	palmitate biosynthesis	100	22 of 22
[Ref.: #66794]	ppGpp biosynthesis	100	4 of 4
[Ref.: #66794]	methylglyoxal degradation	100	5 of 5
[Ref.: #66794]	glycogen metabolism	100	5 of 5
[Ref.: #66794]	valine metabolism	100	9 of 9
[Ref.: #66794]	ketogluconate metabolism	100	8 of 8
[Ref.: #66794]	quinate degradation	100	2 of 2
[Ref.: #66794]	acetate fermentation	100	4 of 4
[Ref.: #66794]	L-lactaldehyde degradation	100	3 of 3
[Ref.: #66794]	gluconeogenesis	100	8 of 8
[Ref.: #66794]	formaldehyde oxidation	100	3 of 3
[Ref.: #66794]	folate polyglutamylation	100	1 of 1
[Ref.: #66794]	CDP-diacylglycerol biosynthesis	100	2 of 2
[Ref.: #66794]	coenzyme A metabolism	100	4 of 4
[Ref.: #66794]	suberin monomers biosynthesis	100	2 of 2
[Ref.: #66794]	ribulose monophosphate pathway	100	2 of 2
[Ref.: #66794]	UDP-GlcNAc biosynthesis	100	3 of 3
[Ref.: #66794]	anapleurotic synthesis of oxalacetate	100	1 of 1
[Ref.: #66794]	pentose phosphate pathway	100	11 of 11
[Ref.: #66794]	kanosamine biosynthesis II	100	2 of 2
[Ref.: #66794]	cis-vaccenate biosynthesis	100	2 of 2
[Ref.: #66794]	threonine metabolism	90	9 of 10
[Ref.: #66794]	starch degradation	90	9 of 10
[Ref.: #66794]	aspartate and asparagine metabolism	88.89	8 of 9
[Ref.: #66794]	allantoin degradation	88.89	8 of 9
[Ref.: #66794]	chorismate metabolism	88.89	8 of 9
[Ref.: #66794]	citric acid cycle	85.71	12 of 14
[Ref.: #66794]	photosynthesis	85.71	12 of 14
[Ref.: #66794]	degradation of pentoses	82.14	23 of 28
[Ref.: #66794]	proline metabolism	81.82	9 of 11
[Ref.: #66794]	phenylacetate degradation (aerobic)	80	4 of 5
[Ref.: #66794]	cellulose degradation	80	4 of 5
[Ref.: #66794]	flavin biosynthesis	80	12 of 15
[Ref.: #66794]	peptidoglycan biosynthesis	80	12 of 15
[Ref.: #66794]	vitamin B12 metabolism	79.41	27 of 34
[Ref.: #66794]	alanine metabolism	79.31	23 of 29
[Ref.: #66794]	histidine metabolism	79.31	23 of 29
[Ref.: #66794]	glutamate and glutamine metabolism	78.57	22 of 28
[Ref.: #66794]	tetrahydrofolate metabolism	78.57	11 of 14
[Ref.: #66794]	4-hydroxymandelate degradation	77.78	7 of 9
[Ref.: #66794]	d-mannose degradation	77.78	7 of 9
[Ref.: #66794]	serine metabolism	77.78	7 of 9
[Ref.: #66794]	molybdenum cofactor biosynthesis	77.78	7 of 9
[Ref.: #66794]	lipid A biosynthesis	77.78	7 of 9
[Ref.: #66794]	NAD metabolism	77.78	14 of 18
[Ref.: #66794]	vitamin B1 metabolism	76.92	10 of 13
[Ref.: #66794]	phenylalanine metabolism	76.92	10 of 13
[Ref.: #66794]	purine metabolism	76.6	72 of 94
[Ref.: #66794]	pyrimidine metabolism	75.56	34 of 45
[Ref.: #66794]	biotin biosynthesis	75	3 of 4
[Ref.: #66794]	glycogen biosynthesis	75	3 of 4
[Ref.: #66794]	sulfopterin metabolism	75	3 of 4
[Ref.: #66794]	isoleucine metabolism	75	6 of 8
[Ref.: #66794]	tryptophan metabolism	73.68	28 of 38
[Ref.: #66794]	methionine metabolism	73.08	19 of 26
[Ref.: #66794]	vitamin B6 metabolism	72.73	8 of 11
[Ref.: #66794]	metabolism of disaccharids	72.73	8 of 11
[Ref.: #66794]	degradation of sugar acids	72	18 of 25
[Ref.: #66794]	propanol degradation	71.43	5 of 7
[Ref.: #66794]	ubiquinone biosynthesis	71.43	5 of 7
[Ref.: #66794]	glutathione metabolism	71.43	10 of 14
[Ref.: #66794]	reductive acetyl coenzyme A pathway	71.43	5 of 7
[Ref.: #66794]	cardiolipin biosynthesis	71.43	5 of 7
[Ref.: #66794]	lipid metabolism	70.97	22 of 31
[Ref.: #66794]	glycolysis	70.59	12 of 17
[Ref.: #66794]	propionate fermentation	70	7 of 10
[Ref.: #66794]	urea cycle	69.23	9 of 13
[Ref.: #66794]	leucine metabolism	69.23	9 of 13
[Ref.: #66794]	degradation of sugar alcohols	68.75	11 of 16
[Ref.: #66794]	oxidative phosphorylation	67.03	61 of 91
[Ref.: #66794]	acetoin degradation	66.67	2 of 3
[Ref.: #66794]	degradation of hexoses	66.67	12 of 18
[Ref.: #66794]	arginine metabolism	66.67	16 of 24
[Ref.: #66794]	methane metabolism	66.67	2 of 3
[Ref.: #66794]	CO2 fixation in Crenarchaeota	66.67	6 of 9
[Ref.: #66794]	octane oxidation	66.67	2 of 3
[Ref.: #66794]	glycolate and glyoxylate degradation	66.67	4 of 6
[Ref.: #66794]	heme metabolism	64.29	9 of 14
[Ref.: #66794]	non-pathway related	63.16	24 of 38
[Ref.: #66794]	dTDPLrhamnose biosynthesis	62.5	5 of 8
[Ref.: #66794]	6-hydroxymethyl-dihydropterin diphosphate biosynthesis	62.5	5 of 8
[Ref.: #66794]	lysine metabolism	61.9	26 of 42
[Ref.: #66794]	cysteine metabolism	61.11	11 of 18
[Ref.: #66794]	creatinine degradation	60	3 of 5
[Ref.: #66794]	myo-inositol biosynthesis	60	6 of 10
[Ref.: #66794]	gallate degradation	60	3 of 5
[Ref.: #66794]	lipoate biosynthesis	60	3 of 5
[Ref.: #66794]	hydrogen production	60	3 of 5
[Ref.: #66794]	3-phenylpropionate degradation	60	9 of 15
[Ref.: #66794]	ascorbate metabolism	59.09	13 of 22
[Ref.: #66794]	degradation of aromatic, nitrogen containing compounds	58.33	7 of 12
[Ref.: #66794]	tyrosine metabolism	57.14	8 of 14
[Ref.: #66794]	d-xylose degradation	54.55	6 of 11
[Ref.: #66794]	isoprenoid biosynthesis	53.85	14 of 26
[Ref.: #66794]	phenol degradation	50	10 of 20
[Ref.: #66794]	aminopropanol phosphate biosynthesis	50	1 of 2
[Ref.: #66794]	cyclohexanol degradation	50	2 of 4
[Ref.: #66794]	dolichol and dolichyl phosphate biosynthesis	50	1 of 2
[Ref.: #66794]	phenylmercury acetate degradation	50	1 of 2
[Ref.: #66794]	resorcinol degradation	50	1 of 2
[Ref.: #66794]	CMP-KDO biosynthesis	50	2 of 4
[Ref.: #66794]	mannosylglycerate biosynthesis	50	1 of 2
[Ref.: #66794]	butanoate fermentation	50	2 of 4
[Ref.: #66794]	ethanol fermentation	50	1 of 2
[Ref.: #66794]	phosphatidylethanolamine bioynthesis	46.15	6 of 13
[Ref.: #66794]	phenylpropanoid biosynthesis	46.15	6 of 13
[Ref.: #66794]	nitrate assimilation	44.44	4 of 9
[Ref.: #66794]	polyamine pathway	43.48	10 of 23
[Ref.: #66794]	carotenoid biosynthesis	40.91	9 of 22
[Ref.: #66794]	glycine metabolism	40	4 of 10
[Ref.: #66794]	arachidonate biosynthesis	40	2 of 5
[Ref.: #66794]	factor 420 biosynthesis	40	2 of 5
[Ref.: #66794]	D-cycloserine biosynthesis	40	2 of 5
[Ref.: #66794]	glycine betaine biosynthesis	40	2 of 5
[Ref.: #66794]	coenzyme M biosynthesis	40	4 of 10
[Ref.: #66794]	methanofuran biosynthesis	40	2 of 5
[Ref.: #66794]	sulfate reduction	38.46	5 of 13
[Ref.: #66794]	androgen and estrogen metabolism	37.5	6 of 16
[Ref.: #66794]	arachidonic acid metabolism	33.33	6 of 18
[Ref.: #66794]	acetyl CoA biosynthesis	33.33	1 of 3
[Ref.: #66794]	sphingosine metabolism	33.33	2 of 6
[Ref.: #66794]	selenocysteine biosynthesis	33.33	2 of 6
[Ref.: #66794]	IAA biosynthesis	33.33	1 of 3
[Ref.: #66794]	sulfoquinovose degradation	33.33	1 of 3
[Ref.: #66794]	(5R)-carbapenem carboxylate biosynthesis	33.33	1 of 3
[Ref.: #66794]	enterobactin biosynthesis	33.33	1 of 3
[Ref.: #66794]	pantothenate biosynthesis	33.33	2 of 6
[Ref.: #66794]	4-hydroxyphenylacetate degradation	30	3 of 10
[Ref.: #66794]	benzoyl-CoA degradation	28.57	2 of 7
[Ref.: #66794]	chlorophyll metabolism	27.78	5 of 18
[Ref.: #66794]	cholesterol biosynthesis	27.27	3 of 11
[Ref.: #66794]	dolichyl-diphosphooligosaccharide biosynthesis	27.27	3 of 11
[Ref.: #66794]	toluene degradation	25	1 of 4
[Ref.: #66794]	lactate fermentation	25	1 of 4
[Ref.: #66794]	alginate biosynthesis	25	1 of 4
[Ref.: #66794]	carnitine metabolism	25	2 of 8
[Ref.: #66794]	bile acid biosynthesis, neutral pathway	23.53	4 of 17
		Only first 10 entries are displayed. Click here to see all.

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #7601]	Sample type/isolated from	air sample
[Ref.: #7601]	Geographic location (country and/or sea, region)	Suwon
[Ref.: #7601]	Country	Republic of Korea
[Ref.: #7601]	Country ISO 3 Code	KOR
[Ref.: #7601]	Continent	Asia

[Ref.: #123742]	Sample type/isolated from	Environment, Air sample
[Ref.: #123742]	Geographic location (country and/or sea, region)	Suwon
[Ref.: #123742]	Country	Republic of Korea
[Ref.: #123742]	Country ISO 3 Code	KOR
[Ref.: #123742]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Environmental

#Air

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence DQ883810 (>99% sequence identity) for Aureimonas ureilytica subclade from Microbeatlas

Aquatic Samples	526
Soil Samples	984
Animal Samples	2300
Plant Samples	1474
Total Samples	5284

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #7601]	Biosafety level	1	Risk group (German classification) According to TRBA 466
[Ref.: #123742]	Biosafety level	1	Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #7601]	Aurantimonas ureilytica strain 5715S-12 16S ribosomal RNA gene, partial sequence	DQ883810	1360	ENA	1121028 tax ID

Genome sequence information:

Only first 5 entries are displayed. Click here to see all.

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Aureimonas ureilytica DSM 18598 = NBRC 106430	GCA_001463945	contig	GenBank	1121028 tax ID	*
[Ref.: #66792]	Aureimonas ureilytica DSM 18598 = NBRC 106430	GCA_000382705	contig	GenBank	1121028 tax ID	*
[Ref.: #66792]	Aureimonas ureilytica DSM 18598	1121028.3	wgs	PATRIC	1121028 tax ID	*
[Ref.: #66792]	Aureimonas ureilytica DSM 18598 = NBRC 106430	1121028.4	wgs	PATRIC	1121028 tax ID	*
[Ref.: #66792]	Aureimonas ureilytica DSM 18598	2834202456	draft	JGI IMG/M	1121028 tax ID	*
[Ref.: #66792]	Aureimonas ureilytica DSM 18598	2515154138	draft	JGI IMG/M	1121028 tax ID	*

[Ref.: #23135]

GC-content

67.0 mol%

high performance liquid chromatography (HPLC)

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Aureimonas ureilytica DSM 18598 = NBRC 106430 PATRIC: 1121028.4
[Ref.: #69481]	spore-forming	no	100	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Aureimonas ureilytica DSM 18598 PATRIC: 1121028.3
[Ref.: #69480]	motile	yes	77.2	no
[Ref.: #69480]	flagellated	no	76.834	no
[Ref.: #69480]	gram-positive	no	97.46	yes
[Ref.: #69480]	anaerobic	no	96.353	yes
[Ref.: #69480]	aerobic	yes	91.38	no
[Ref.: #69480]	halophile	no	88.299	no
[Ref.: #69480]	spore-forming	no	93.83	no
[Ref.: #69480]	thermophile	no	99.178	no
[Ref.: #69480]	glucose-util	yes	91.797	no
[Ref.: #69480]	glucose-ferment	no	88.187	no

Availability in culture collections External links

[Ref.: #7601]

Culture collection no.

DSM 18598, CIP 109815, KACC 11607

[Ref.: #70211]

SI-ID 309430

Literature:

Topic	Title	Authors	Journal	DOI	Year
Genetics	Genomic characterization of a temperate phage of the psychrotolerant deep-sea bacterium Aurantimonas sp.	Yoshida M, Yoshida-Takashima Y, Nunoura T, Takai K	Extremophiles	10.1007/s00792-014-0702-5	2014	*
Phylogeny	Aureimonas ferruginea sp. nov. and Aureimonas rubiginis sp. nov., two siderophore-producing bacteria isolated from rusty iron plates.	Lin SY, Hameed A, Liu YC, Hsu YH, Lai WA, Shen FT, Young LS, Tsai CF, Young CC	Int J Syst Evol Microbiol	10.1099/ijs.0.047431-0	2012	*
Phylogeny	Aureimonas jatrophae sp. nov. and Aureimonas phyllosphaerae sp. nov., leaf-associated bacteria isolated from Jatropha curcas L.	Madhaiyan M, Hu CJ, Jegan Roy J, Kim SJ, Weon HY, Kwon SW, Ji L	Int J Syst Evol Microbiol	10.1099/ijs.0.041020-0	2012	*
Phylogeny	Reclassification of Aurantimonas altamirensis (Jurado et al. 2006), Aurantimonas ureilytica (Weon et al. 2007) and Aurantimonas frigidaquae (Kim et al. 2008) as members of a new genus, Aureimonas gen. nov., as Aureimonas altamirensis gen. nov., comb. nov., Aureimonas ureilytica comb. nov. and Aureimonas frigidaquae comb. nov., and emended descriptions of the genera Aurantimonas and Fulvimarina.	Rathsack K, Reitner J, Stackebrandt E, Tindall BJ	Int J Syst Evol Microbiol	10.1099/ijs.0.027029-0	2010	*
Phylogeny	Aurantimonas ureilytica sp. nov., isolated from an air sample.	Weon HY, Kim BY, Yoo SH, Joa JH, Lee KH, Zhang YS, Kwon SW, Koo BS	Int J Syst Evol Microbiol	10.1099/ijs.0.65035-0	2007	*

References

#7601

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 18598

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#23135

Hang-Yeon Weon, Byung-Yong Kim, Seung-Hee Yoo, Jae-Ho Joa, Ki Hwan Lee, Yong-Seon Zhang, Soon-Wo Kwon, Bon-Sung Koo: Aurantimonas ureilytica sp. nov., isolated from an air sample. IJSEM 57: 1717 - 1720 2007 ( DOI 10.1099/ijs.0.65035-0 , PubMed 17684243 )

#23357

K. Rathsack, J. Reitner, E. Stackebrandt, B. J. Tindall: Reclassification of Aurantimonas altamirensis (Jurado et al. 2006), Aurantimonas ureilytica (Weon et al. 2007) and Aurantimonas frigidaquae (Kim et al. 2008) as members of a new genus, Aureimonas gen. nov., as Aureimonas altamirensis gen. nov., comb. nov., Aureimonas ureilytica comb. nov. and Aureimonas frigidaquae comb. nov., and emended descriptions of the genera Aurantimonas and Fulvimarina. IJSEM 61: 2722 - 2728 2011 ( DOI 10.1099/ijs.0.027029-0 , PubMed 21186293 )

#37853 ; Curators of the CIP;

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#66794

Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg: BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49: D498 - D508 2020 ( DOI 10.1093/nar/gkaa1025 , PubMed 33211880 )

#68382

Automatically annotated from API zym .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#70211

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID309430.1 )

#123742 Collection of Institut Pasteur ; Curators of the CIP; CIP 109815
* These data were automatically processed and therefore are not curated

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Aureimonas ureilytica DSM 18598 = NBRC 106430

Aureimonas ureilytica DSM 18598

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