Chlorobaculum limnaeum 4930 | Type strain | DSM 1677

Strain identifier

BacDive ID: 2396

Type strain:

Species: Chlorobaculum limnaeum

Strain Designation: 4930

Culture col. no.: DSM 1677

Strain history: <- H. Biebl, 4930

Section

Name and taxonomic classification
Morphology
Culture and growth conditions
Physiology and metabolism
Isolation, sampling and environmental information
Safety information
Sequence information

External links

Chlorobaculum limnaeum 4930 is an anaerobe, phototroph, mesophilic bacterium of the family Chlorobiaceae.

rod-shaped
anaerobe
mesophilic
phototroph
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification.Name and taxonomic classification

	Last LPSN update	23-11-2020 (DD-MM-YYYY)
	Domain	Bacteria
	Phylum	Chlorobi
	Class	Chlorobia
	Order	Chlorobiales
	Family	Chlorobiaceae
	Genus	Chlorobaculum
	Species	Chlorobaculum limnaeum
	Full Scientific Name (PNU)	Chlorobaculum limnaeum Imhoff 2003

Information on morphological and physiological propertiesMorphology

[Ref.: #23074]	Cell width	0.6-0.8 µm
[Ref.: #23074]	Cell shape	rod-shaped
[Ref.: #23074]	Motility	no

Information on culture and growth conditionsCulture and growth conditions

[Ref.: #854]

Culture medium

PFENNIG'S MEDIUM II (modified 1988, for green sulfur bacteria) (DSMZ Medium 29), anaerobic in light

[Ref.: #854]

Culture medium growth

[Ref.: #854]

Culture medium link

medium recipe provided by DSMZ

	Temperatures	Kind of temperature		Temperature
[Ref.: #854]			growth	25 ̊C

[Ref.: #854]

Temperature range

mesophilic

Information on physiology and metabolismPhysiology and metabolism

[Ref.: #854]	Oxygen tolerance	anaerobe
[Ref.: #23074]	Oxygen tolerance	obligate anaerobe

[Ref.: #23074]

Nutrition type

phototroph

	Metabolite utilization	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #23074]		cobalamin ChEBI	+	growth
[Ref.: #23074]		sodium chloride ChEBI	+	growth

Information on isolation source, the sampling and environmental conditionsIsolation, sampling and environmental information

[Ref.: #854]	Geographic location (country and/or sea, region)	Lake Kinnevet
[Ref.: #854]	Country	Israel
[Ref.: #854]	Country ISO 3 Code	ISR
[Ref.: #854]	Continent	Asia
* marker position based on {}

Information on possible application of the strain and its possible interaction with e.g. potential hostsSafety information

[Ref.: #854]

Biosafety level

Risk group (German classification)

Information on genomic background e.g. entries in nucleic sequence databassSequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20218]	Chlorobaculum limnaeum partial 16S rRNA gene, type strain DSM 1677T	HE582773	1492	ENA	274537 tax ID	*
[Ref.: #23074]	Chlorobaculum limnaeum partial 16S rRNA gene, type strain DSM 1677T	AJ290831	1241	GenBank	274537 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Chlorobaculum limnaeum DSM 1677	GCA_001747405	complete	GenBank	274537 tax ID
[Ref.: #66792]	Chlorobaculum limnaeum strain DSM 1677	274537.5	complete	PATRIC	274537 tax ID

Availability in culture collectionsExternal links

[Ref.: #854]

Culture collection no.

DSM 1677

[Ref.: #20218]

Associated Passport(s) in StrainInfo

157470

References

#854	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 1677

#20215

Leibniz Institute DSMZ D.Gleim, M.Kracht, N.Weiss et. al.: Prokaryotic Nomenclature Up-to-date - compilation of all names of Bacteria and Archaea, validly published according to the Bacteriological Code since 1. Jan. 1980, and validly published nomenclatural changes since .

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#23074

Johannes F. Imhoff: Phylogenetic taxonomy of the family Chlorobiaceae on the basis of 16S rRNA and fmo (Fenna-Matthews-Olson protein) gene sequences. IJSEM 53: 941 - 951 2003 ( DOI 10.1099/ijs.0.02403-0 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

* These References are textmined

Change proposal

You found an error in BacDive? Please tell us about it!

Note that changes will be reviewed and judged. If your changes are legitimate, changes will occur within the next BacDive update. Only proposed changes supported by the according reference will be reviewed. The BacDive team reserves the right to reject proposed changes.

Search for species Chlorobaculum limnaeum in external resources:
SILVA
BRENDA
PANGAEA
StrainInfo
GBIF