Name: Aquimarina algiphila 9Alg 151
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 158636

Type strain:

Species: Aquimarina algiphila

Strain Designation: 9Alg 151

Culture col. no.: KCTC 23622, KMM 6462

Strain history: <- OI Nedashkovskaya, Pacific Institute of Bioorganic Chemistry, Russia

NCBI tax ID(s): 2047982 (species)

Section

Aquimarina algiphila 9Alg 151 is an aerobe, Gram-negative, motile bacterium that forms circular colonies and was isolated from red alga Tichocarpus crinitus.

colony-forming
Gram-negative
motile
rod-shaped
aerobe
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacteroidota*
	Class	*Flavobacteriia*
	Order	*Flavobacteriales*
	Family	*Flavobacteriaceae*
	Genus	*Aquimarina*
	Species	**Aquimarina algiphila**
	Full Scientific Name (LPSN)	Aquimarina algiphila Nedashkovskaya et al. 2018

Information on morphological and physiological properties Morphology

[Ref.: #65361]	Gram stain	negative
[Ref.: #67771]	Gram stain	negative

[Ref.: #65361]	Cell length	1.7-4.5 µm

[Ref.: #65361]	Cell width	0.3-0.5 µm

[Ref.: #65361]	Cell shape	rod-shaped
[Ref.: #67771]	Cell shape	rod-shaped

[Ref.: #65361]	Motility	yes
[Ref.: #67771]	Motility	yes

[Ref.: #65361]	Flagellum arrangement	gliding
[Ref.: #67771]	Flagellum arrangement	gliding

[Ref.: #65361]	Colony size	1-2 mm
[Ref.: #65361]	Colony color	yellow-orange
[Ref.: #65361]	Colony shape	circular
[Ref.: #65361]	Cultivation medium used	marine agar 2216

[Ref.: #65361]	Pigment production	no
[Ref.: #65361]	Pigment name	flexirubin-type pigments

Information on culture and growth conditions Culture and growth conditions

[Ref.: #65361]

Culture medium

Marine agar (MA)

[Ref.: #65361]

Culture medium growth

		Temperature
[Ref.: #65361]	growth	5-34 °C
[Ref.: #65361]	optimum	25-28 °C
[Ref.: #67771]	growth	25-28 °C

[Ref.: #65361]	Temperature range	mesophilic
[Ref.: #67771]	Temperature range	mesophilic

	pH	Kind of pH		pH
[Ref.: #65361]			optimum	7.5
[Ref.: #65361]			growth	6-9.5

Information on physiology and metabolism Physiology and metabolism

[Ref.: #65361]	Oxygen tolerance	aerobe
[Ref.: #67771]	Oxygen tolerance	aerobe

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #65361]		NaCl		growth	0.5-5	%
[Ref.: #65361]		NaCl		optimum	2-4	%

[Ref.: #65361]	Observation	NaCl alone does not support growth, seawater or artificial seawater are required for strain cultivation.
[Ref.: #67771]	Observation	quinones: MK-6

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #65361]	agar ChEBI	+	hydrolysis
[Ref.: #65361]	amygdalin ChEBI	+	assimilation
[Ref.: #65361]	carboxymethylcellulose ChEBI	-	hydrolysis
[Ref.: #65361]	casein	-	hydrolysis
[Ref.: #65361]	cellobiose ChEBI	-	builds acid from
[Ref.: #65361]	chitin ChEBI	+	hydrolysis
[Ref.: #65361]	citrate ChEBI	-	builds acid from
[Ref.: #65361]	citrate ChEBI	+	assimilation
[Ref.: #65361]	D-fructose ChEBI	-	builds acid from
[Ref.: #65361]	D-galactose ChEBI	-	builds acid from
[Ref.: #65361]	D-glucose ChEBI	+	assimilation
[Ref.: #65361]	D-glucose ChEBI	+	builds acid from
[Ref.: #65361]	D-mannose ChEBI	-	builds acid from
[Ref.: #65361]	D-mannose ChEBI	+	assimilation
[Ref.: #65361]	D-xylose ChEBI	-	builds acid from
[Ref.: #65361]	dna ChEBI	+	hydrolysis
[Ref.: #65361]	esculin ChEBI	+	hydrolysis
[Ref.: #65361]	esculin ChEBI	+	oxidation
[Ref.: #65361]	gelatin ChEBI	+	hydrolysis
[Ref.: #65361]	glycerol ChEBI	-	builds acid from
[Ref.: #65361]	L-arabinose ChEBI	-	builds acid from
[Ref.: #65361]	L-rhamnose ChEBI	-	builds acid from
[Ref.: #65361]	lactose ChEBI	-	builds acid from
[Ref.: #65361]	lactose ChEBI	+	assimilation
[Ref.: #65361]	maltose ChEBI	-	builds acid from
[Ref.: #65361]	mannitol ChEBI	-	builds acid from
[Ref.: #65361]	melibiose ChEBI	-	builds acid from
[Ref.: #65361]	myo-inositol ChEBI	-	builds acid from
[Ref.: #65361]	N-acetylglucosamine ChEBI	-	builds acid from
[Ref.: #65361]	nitrate ChEBI	+	reduction
[Ref.: #65361]	raffinose ChEBI	-	builds acid from
[Ref.: #65361]	ribose ChEBI	-	builds acid from
[Ref.: #65361]	sorbitol ChEBI	-	builds acid from
[Ref.: #65361]	starch ChEBI	+	hydrolysis
[Ref.: #65361]	sucrose ChEBI	-	builds acid from
[Ref.: #65361]	sucrose ChEBI	+	assimilation
[Ref.: #65361]	trehalose ChEBI	-	builds acid from
[Ref.: #65361]	tween 20 ChEBI	-	hydrolysis
[Ref.: #65361]	tween 40 ChEBI	+	hydrolysis
[Ref.: #65361]	tween 80 ChEBI	+	hydrolysis
[Ref.: #65361]	urea ChEBI	-	hydrolysis
	Only first 10 entries are displayed. Click here to see all.

	Metabolite	Antibiotic sensitivity	Concentration		Antibiotic resistance	Concentration
[Ref.: #65361]	ampicillin ChEBI				yes	10	µg (disc)
[Ref.: #65361]	carbenicillin ChEBI	yes	100	µg (disc)
[Ref.: #65361]	cefazolin ChEBI				yes	30	µg (disc)
[Ref.: #65361]	cephalexin ChEBI	yes	30	µg (disc)
[Ref.: #65361]	chloramphenicol ChEBI	yes	30	µg (disc)
[Ref.: #65361]	cloxacillin ChEBI				yes	10	µg (disc)
[Ref.: #65361]	doxycycline ChEBI				yes	10	µg (disc)
[Ref.: #65361]	erythromycin ChEBI	yes	15	µg (disc)
[Ref.: #65361]	gentamicin ChEBI				yes	10	µg (disc)
[Ref.: #65361]	kanamycin ChEBI				yes	30	µg (disc)
[Ref.: #65361]	lincomycin ChEBI	yes	15	µg (disc)
[Ref.: #65361]	nalidixic acid ChEBI	yes	30	µg (disc)
[Ref.: #65361]	neomycin ChEBI				yes	30	µg (disc)
[Ref.: #65361]	ofloxacin ChEBI	yes	5	µg (disc)
[Ref.: #65361]	oleandomycin ChEBI				yes	15	µg (disc)
[Ref.: #65361]	penicillin g ChEBI				yes	10	Unit (disc)
[Ref.: #65361]	polymyxin b ChEBI				yes	300	Unit (disc)
[Ref.: #65361]	rifampicin ChEBI	yes	5	µg (disc)
[Ref.: #65361]	streptomycin ChEBI				yes	30	µg (disc)
[Ref.: #65361]	tetracycline ChEBI				yes	5	µg (disc)
[Ref.: #65361]	vancomycin ChEBI	yes	30	µg (disc)
	Only first 10 entries are displayed. Click here to see all.

	Metabolite	Production
[Ref.: #65361]	acetoin ChEBI	no
[Ref.: #65361]	hydrogen sulfide ChEBI	no
[Ref.: #65361]	indole ChEBI	no

	Enzyme	Enzyme activity	EC number
[Ref.: #65361]	acid phosphatase	+	3.1.3.2
[Ref.: #65361]	alkaline phosphatase	+	3.1.3.1
[Ref.: #65361]	alpha-chymotrypsin	+	3.4.21.1
[Ref.: #65361]	alpha-fucosidase	-	3.2.1.51
[Ref.: #65361]	alpha-galactosidase	-	3.2.1.22
[Ref.: #65361]	alpha-glucosidase	+	3.2.1.20
[Ref.: #65361]	alpha-mannosidase	-	3.2.1.24
[Ref.: #65361]	arginine dihydrolase	-	3.5.3.6
[Ref.: #65361]	beta-galactosidase	-	3.2.1.23
[Ref.: #65361]	beta-glucosidase	-	3.2.1.21
[Ref.: #65361]	beta-glucuronidase	-	3.2.1.31
[Ref.: #65361]	cystine arylamidase	+	3.4.11.3
[Ref.: #65361]	esterase (C 4)	+
[Ref.: #65361]	esterase Lipase (C 8)	+
[Ref.: #65361]	leucine arylamidase	+	3.4.11.1
[Ref.: #65361]	lipase (C 14)	-
[Ref.: #65361]	lysine decarboxylase	-	4.1.1.18
[Ref.: #65361]	N-acetyl-beta-glucosaminidase	-	3.2.1.52
[Ref.: #65361]	naphthol-AS-BI-phosphohydrolase	+
[Ref.: #65361]	ornithine decarboxylase	-	4.1.1.17
[Ref.: #65361]	trypsin	+	3.4.21.4
[Ref.: #65361]	tryptophan deaminase	-	4.1.99.1
[Ref.: #65361]	valine arylamidase	+
	Only first 10 entries are displayed. Click here to see all.

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #65361]	Sample type/isolated from	red alga Tichocarpus crinitus
[Ref.: #65361]	Geographic location (country and/or sea, region)	Troitsa Bay, Gulf of Peter the Great, Sea of Japan (also is known as the East Sea), Pacific Ocean
[Ref.: #65361]	Country	Russia
[Ref.: #65361]	Country ISO 3 Code	RUS
[Ref.: #65361]	Continent	Asia
[Ref.: #65361]	Geographic location	42.6225°/131.1350°
[Ref.: #65361]	Enrichment culture	marine agar 2216
[Ref.: #65361]	Enrichment culture temperature	28 ̊C

[Ref.: #67771]	Sample type/isolated from	From the red algae 'Tichocarpus crinitus`
[Ref.: #67771]	Geographic location (country and/or sea, region)	Troitsa Bay, Gulf of Peter the Great, Donghae(Sea of Japan), Pacific Ocean
[Ref.: #67771]	Country	Russia
[Ref.: #67771]	Country ISO 3 Code	RUS
[Ref.: #67771]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Host

#Algae

#Red algae

What are isolation sources categories?

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #65361]	16S rRNA gene sequence	MG232646		GenBank

[Ref.: #65361]	GC-content	32.6 mol%	thermal denaturation, midpoint method (Tm)
[Ref.: #67771]	GC-content	32.6 mol%

Availability in culture collections External links

[Ref.: #65361]

Culture collection no.

KCTC 23622, KMM 6462

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Aquimarina algiphila sp. nov., a chitin degrading bacterium isolated from the red alga Tichocarpus crinitus.	Nedashkovskaya OI, Kim SG, Stenkova AM, Kukhlevskiy AD, Zhukova NV, Mikhailov VV	Int J Syst Evol Microbiol	10.1099/ijsem.0.002606	2018	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#65361

Olga I. Nedashkovskaya, Song-Gun Kim, Anna M. Stenkova, Andrey D. Kukhlevskiy, Natalia V. Zhukova, Valery V. Mikhailov: Aquimarina algiphila sp. nov., a chitin degrading bacterium isolated from the red alga Tichocarpus crinitus. IJSEM 68: 892 - 898 2018 ( DOI 10.1099/ijsem.0.002606 , PubMed 29458485 )

#67771 Korean Collection for Type Cultures (KCTC) ; Curators of the KCTC;
* These data were automatically processed and therefore are not curated

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