Name: Acinetobacter larvae BRTC-1
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 133403

Type strain:

Species: Acinetobacter larvae

Strain Designation: BRTC-1

Culture col. no.: ACCC 19936, JCM 31367

Strain history: Y. Wang; Biogas Inst. of Min. of Agric., CAAS, China; BRTC-1.

NCBI tax ID(s): 1789224 (species)

Section

Acinetobacter larvae BRTC-1 is an aerobe, Gram-negative, coccus-shaped bacterium that forms circular colonies and was isolated from gut of O. fuscidentalis.

coccus-shaped
colony-forming
Gram-negative
aerobe
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	*Pseudomonadales*
	Family	*Moraxellaceae*
	Genus	*Acinetobacter*
	Species	**Acinetobacter larvae**
	Full Scientific Name (LPSN)	Acinetobacter larvae Liu et al. 2017

Information on morphological and physiological properties Morphology

[Ref.: #25280]	Gram stain	negative
[Ref.: #69480]	Gram stain	negative Confidence in %99.991

[Ref.: #25280]	Cell length	0.5-1.1 µm

[Ref.: #25280]	Cell width	0.2-0.8 µm

[Ref.: #25280]	Cell shape	coccus-shaped

[Ref.: #25280]	Motility	no
[Ref.: #69480]	Motility	no Confidence in %90.606

[Ref.: #25280]	Colony size	1.0-3.0 mm
[Ref.: #25280]	Colony color	milky-yellow
[Ref.: #25280]	Colony shape	circular
[Ref.: #25280]	Incubation period	3 days
[Ref.: #25280]	Cultivation medium used	tryptic soy agar (TSA)

Information on culture and growth conditions Culture and growth conditions

[Ref.: #25280]

Culture medium

tryptic soy agar (TSA)

[Ref.: #25280]

Culture medium growth

		Temperature
[Ref.: #25280]	growth	10-45 °C
[Ref.: #25280]	optimum	30-35 °C
[Ref.: #67770]	growth	30 °C

[Ref.: #25280]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic

	pH	Kind of pH		pH
[Ref.: #25280]			optimum	6
[Ref.: #25280]			growth	5.0-9.0

Information on physiology and metabolism Physiology and metabolism

[Ref.: #25280]

Oxygen tolerance

aerobe

[Ref.: #25280]	Ability of spore formation	no
[Ref.: #69481]	Ability of spore formation	no Confidence in %100
[Ref.: #69480]	Ability of spore formation	no Confidence in %99.986

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #25280]		NaCl		growth	0.0-5.0	%(w/v)
[Ref.: #25280]		NaCl		optimum	0	%(w/v)

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #25280]	2,3-butanediol ChEBI	+	carbon source
[Ref.: #25280]	4-hydroxybenzoate ChEBI	+	carbon source
[Ref.: #25280]	4-oxopentanoate ChEBI	-	growth
[Ref.: #25280]	acetate ChEBI	+	carbon source
[Ref.: #25280]	adipate ChEBI	+	carbon source
[Ref.: #25280]	azelaate ChEBI	-	growth
[Ref.: #25280]	benzoate ChEBI	+	carbon source
[Ref.: #25280]	beta-alanine ChEBI	+	carbon source
[Ref.: #25280]	casein	-	hydrolysis
[Ref.: #25280]	citraconate ChEBI	-	growth
[Ref.: #25280]	citrate ChEBI	+	carbon source
[Ref.: #25280]	D-gluconate ChEBI	-	growth
[Ref.: #25280]	D-glucose ChEBI	-	growth
[Ref.: #25280]	D-glucose ChEBI	+	builds acid from
[Ref.: #25280]	D-malate ChEBI	+	carbon source
[Ref.: #25280]	D-ribose ChEBI	-	growth
[Ref.: #25280]	esculin ChEBI	-	hydrolysis
[Ref.: #25280]	ethanol ChEBI	+	carbon source
[Ref.: #25280]	gamma-aminobutyric acid ChEBI	+	carbon source
[Ref.: #25280]	gelatin ChEBI	-	hydrolysis
[Ref.: #25280]	gentisate ChEBI	-	growth
[Ref.: #25280]	glucose ChEBI	-	fermentation
[Ref.: #25280]	glutaric acid ChEBI	+	carbon source
[Ref.: #25280]	histamine ChEBI	-	growth
[Ref.: #25280]	L-arabinose ChEBI	-	growth
[Ref.: #25280]	L-arginine ChEBI	+	carbon source
[Ref.: #25280]	L-aspartate ChEBI	+	carbon source
[Ref.: #25280]	L-histidine ChEBI	+	carbon source
[Ref.: #25280]	L-leucine ChEBI	-	growth
[Ref.: #25280]	L-ornithine ChEBI	+	carbon source
[Ref.: #25280]	L-phenylalanine ChEBI	-	growth
[Ref.: #25280]	L-tartrate ChEBI	-	growth
[Ref.: #25280]	lactate ChEBI	+	carbon source
[Ref.: #25280]	malonate ChEBI	+	carbon source
[Ref.: #25280]	nitrate ChEBI	-	reduction
[Ref.: #25280]	phenylacetate ChEBI	-	growth
[Ref.: #25280]	putrescine ChEBI	+	carbon source
[Ref.: #25280]	starch ChEBI	-	hydrolysis
[Ref.: #25280]	trans-aconitate ChEBI	+	carbon source
[Ref.: #25280]	tricarballylate ChEBI	-	growth
[Ref.: #25280]	trigonelline ChEBI	-	growth
[Ref.: #25280]	tryptamine ChEBI	-	growth
	Only first 10 entries are displayed. Click here to see all.

	Metabolite	Production
[Ref.: #25280]	acetoin ChEBI	yes
[Ref.: #25280]	hydrogen sulfide ChEBI	no
[Ref.: #25280]	indole ChEBI	no

	Physiological tests	Metabolite	Voges-Proskauer-test
[Ref.: #25280]		acetoin ChEBI	+

	Enzyme	Enzyme activity	EC number
[Ref.: #25280]	acid phosphatase	+	3.1.3.2
[Ref.: #25280]	alkaline phosphatase	+	3.1.3.1
[Ref.: #25280]	catalase	+	1.11.1.6
[Ref.: #25280]	cytochrome oxidase	-	1.9.3.1
[Ref.: #25280]	esterase (C 4)	+
[Ref.: #25280]	esterase Lipase (C 8)	+
[Ref.: #25280]	lipase (C 14)	+

Fatty acid profile

Metadata FA analysis

Reference

[Ref.: #25280]

Fatty acid	Percentage
C18:1ω9c	40.6
C16:0	16.9
C16:1ω7c / C15:0 iso 2OH	15.3
C12:0	6.6
C12:0 3OH	6.2
C18:0	4
C12:0 2OH	2.4
C17:0 10-methyl	2.3
C18:3ω6c	1.4

	Pathway	Enzyme coverage	Annotated reactions
	Pathway annotation	Computationally determined by
[Ref.: #66794]	ceramide biosynthesis	100	1 of 1
[Ref.: #66794]	coenzyme A metabolism	100	4 of 4
[Ref.: #66794]	formaldehyde oxidation	100	3 of 3
[Ref.: #66794]	glycine betaine biosynthesis	100	5 of 5
[Ref.: #66794]	cyanate degradation	100	3 of 3
[Ref.: #66794]	biotin biosynthesis	100	4 of 4
[Ref.: #66794]	adipate degradation	100	2 of 2
[Ref.: #66794]	palmitate biosynthesis	100	22 of 22
[Ref.: #66794]	enterobactin biosynthesis	100	3 of 3
[Ref.: #66794]	cis-vaccenate biosynthesis	100	2 of 2
[Ref.: #66794]	sulfopterin metabolism	100	4 of 4
[Ref.: #66794]	CDP-diacylglycerol biosynthesis	100	2 of 2
[Ref.: #66794]	taurine degradation	100	1 of 1
[Ref.: #66794]	UDP-GlcNAc biosynthesis	100	3 of 3
[Ref.: #66794]	valine metabolism	100	9 of 9
[Ref.: #66794]	ppGpp biosynthesis	100	4 of 4
[Ref.: #66794]	suberin monomers biosynthesis	100	2 of 2
[Ref.: #66794]	methylglyoxal degradation	100	5 of 5
[Ref.: #66794]	anapleurotic synthesis of oxalacetate	100	1 of 1
[Ref.: #66794]	folate polyglutamylation	100	1 of 1
[Ref.: #66794]	tetrahydrofolate metabolism	92.86	13 of 14
[Ref.: #66794]	vitamin B1 metabolism	92.31	12 of 13
[Ref.: #66794]	threonine metabolism	90	9 of 10
[Ref.: #66794]	serine metabolism	88.89	8 of 9
[Ref.: #66794]	lipid A biosynthesis	88.89	8 of 9
[Ref.: #66794]	chorismate metabolism	88.89	8 of 9
[Ref.: #66794]	isoleucine metabolism	87.5	7 of 8
[Ref.: #66794]	photosynthesis	85.71	12 of 14
[Ref.: #66794]	ubiquinone biosynthesis	85.71	6 of 7
[Ref.: #66794]	reductive acetyl coenzyme A pathway	85.71	6 of 7
[Ref.: #66794]	glutamate and glutamine metabolism	85.71	24 of 28
[Ref.: #66794]	NAD metabolism	83.33	15 of 18
[Ref.: #66794]	vitamin B6 metabolism	81.82	9 of 11
[Ref.: #66794]	3-chlorocatechol degradation	80	4 of 5
[Ref.: #66794]	peptidoglycan biosynthesis	80	12 of 15
[Ref.: #66794]	citric acid cycle	78.57	11 of 14
[Ref.: #66794]	heme metabolism	78.57	11 of 14
[Ref.: #66794]	cysteine metabolism	77.78	14 of 18
[Ref.: #66794]	CO2 fixation in Crenarchaeota	77.78	7 of 9
[Ref.: #66794]	leucine metabolism	76.92	10 of 13
[Ref.: #66794]	phenylalanine metabolism	76.92	10 of 13
[Ref.: #66794]	alanine metabolism	75.86	22 of 29
[Ref.: #66794]	butanoate fermentation	75	3 of 4
[Ref.: #66794]	acetate fermentation	75	3 of 4
[Ref.: #66794]	6-hydroxymethyl-dihydropterin diphosphate biosynthesis	75	6 of 8
[Ref.: #66794]	CMP-KDO biosynthesis	75	3 of 4
[Ref.: #66794]	lactate fermentation	75	3 of 4
[Ref.: #66794]	gluconeogenesis	75	6 of 8
[Ref.: #66794]	flavin biosynthesis	73.33	11 of 15
[Ref.: #66794]	lysine metabolism	71.43	30 of 42
[Ref.: #66794]	propanol degradation	71.43	5 of 7
[Ref.: #66794]	cardiolipin biosynthesis	71.43	5 of 7
[Ref.: #66794]	glutathione metabolism	71.43	10 of 14
[Ref.: #66794]	purine metabolism	71.28	67 of 94
[Ref.: #66794]	propionate fermentation	70	7 of 10
[Ref.: #66794]	sulfate reduction	69.23	9 of 13
[Ref.: #66794]	octane oxidation	66.67	2 of 3
[Ref.: #66794]	aspartate and asparagine metabolism	66.67	6 of 9
[Ref.: #66794]	acetyl CoA biosynthesis	66.67	2 of 3
[Ref.: #66794]	L-lactaldehyde degradation	66.67	2 of 3
[Ref.: #66794]	acetoin degradation	66.67	2 of 3
[Ref.: #66794]	molybdenum cofactor biosynthesis	66.67	6 of 9
[Ref.: #66794]	tryptophan metabolism	65.79	25 of 38
[Ref.: #66794]	histidine metabolism	65.52	19 of 29
[Ref.: #66794]	proline metabolism	63.64	7 of 11
[Ref.: #66794]	C4 and CAM-carbon fixation	62.5	5 of 8
[Ref.: #66794]	arginine metabolism	62.5	15 of 24
[Ref.: #66794]	non-pathway related	60.53	23 of 38
[Ref.: #66794]	vitamin K metabolism	60	3 of 5
[Ref.: #66794]	gallate degradation	60	3 of 5
[Ref.: #66794]	lipid metabolism	58.06	18 of 31
[Ref.: #66794]	pyrimidine metabolism	57.78	26 of 45
[Ref.: #66794]	isoprenoid biosynthesis	57.69	15 of 26
[Ref.: #66794]	degradation of sugar alcohols	56.25	9 of 16
[Ref.: #66794]	allantoin degradation	55.56	5 of 9
[Ref.: #66794]	d-mannose degradation	55.56	5 of 9
[Ref.: #66794]	phosphatidylethanolamine bioynthesis	53.85	7 of 13
[Ref.: #66794]	urea cycle	53.85	7 of 13
[Ref.: #66794]	methionine metabolism	53.85	14 of 26
[Ref.: #66794]	oxidative phosphorylation	51.65	47 of 91
[Ref.: #66794]	glycine metabolism	50	5 of 10
[Ref.: #66794]	kanosamine biosynthesis II	50	1 of 2
[Ref.: #66794]	ethanol fermentation	50	1 of 2
[Ref.: #66794]	tyrosine metabolism	50	7 of 14
[Ref.: #66794]	toluene degradation	50	2 of 4
[Ref.: #66794]	degradation of aromatic, nitrogen containing compounds	50	6 of 12
[Ref.: #66794]	quinate degradation	50	1 of 2
[Ref.: #66794]	glycolysis	47.06	8 of 17
[Ref.: #66794]	3-phenylpropionate degradation	46.67	7 of 15
[Ref.: #66794]	4-hydroxymandelate degradation	44.44	4 of 9
[Ref.: #66794]	Entner Doudoroff pathway	40	4 of 10
[Ref.: #66794]	4-hydroxyphenylacetate degradation	40	4 of 10
[Ref.: #66794]	phenylacetate degradation (aerobic)	40	2 of 5
[Ref.: #66794]	factor 420 biosynthesis	40	2 of 5
[Ref.: #66794]	arachidonate biosynthesis	40	2 of 5
[Ref.: #66794]	phenol degradation	40	8 of 20
[Ref.: #66794]	lipoate biosynthesis	40	2 of 5
[Ref.: #66794]	ketogluconate metabolism	37.5	3 of 8
[Ref.: #66794]	androgen and estrogen metabolism	37.5	6 of 16
[Ref.: #66794]	ascorbate metabolism	36.36	8 of 22
[Ref.: #66794]	pentose phosphate pathway	36.36	4 of 11
[Ref.: #66794]	glycolate and glyoxylate degradation	33.33	2 of 6
[Ref.: #66794]	(5R)-carbapenem carboxylate biosynthesis	33.33	1 of 3
[Ref.: #66794]	degradation of hexoses	33.33	6 of 18
[Ref.: #66794]	pantothenate biosynthesis	33.33	2 of 6
[Ref.: #66794]	methane metabolism	33.33	1 of 3
[Ref.: #66794]	selenocysteine biosynthesis	33.33	2 of 6
[Ref.: #66794]	IAA biosynthesis	33.33	1 of 3
[Ref.: #66794]	nitrate assimilation	33.33	3 of 9
[Ref.: #66794]	phenylpropanoid biosynthesis	30.77	4 of 13
[Ref.: #66794]	coenzyme M biosynthesis	30	3 of 10
[Ref.: #66794]	degradation of pentoses	28.57	8 of 28
[Ref.: #66794]	benzoyl-CoA degradation	28.57	2 of 7
[Ref.: #66794]	dolichyl-diphosphooligosaccharide biosynthesis	27.27	3 of 11
[Ref.: #66794]	carnitine metabolism	25	2 of 8
[Ref.: #66794]	vitamin E metabolism	25	1 of 4
[Ref.: #66794]	cyclohexanol degradation	25	1 of 4
[Ref.: #66794]	dTDPLrhamnose biosynthesis	25	2 of 8
[Ref.: #66794]	glycogen biosynthesis	25	1 of 4
[Ref.: #66794]	chlorophyll metabolism	22.22	4 of 18
[Ref.: #66794]	arachidonic acid metabolism	22.22	4 of 18
[Ref.: #66794]	vitamin B12 metabolism	20.59	7 of 34
		Only first 10 entries are displayed. Click here to see all.

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #25280]	Sample type/isolated from	gut of O. fuscidentalis
[Ref.: #25280]	Geographic location (country and/or sea, region)	Xishuangbanna Dai
[Ref.: #25280]	Country	China
[Ref.: #25280]	Country ISO 3 Code	CHN
[Ref.: #25280]	Continent	Asia
[Ref.: #25280]	Enrichment culture	tryptic soy agar (TSA, BD/Difco)
[Ref.: #25280]	Enrichment culture duration	36 hours
[Ref.: #25280]	Enrichment culture temperature	30 ̊C
[Ref.: #25280]	Isolation/enrichment procedure	serial dilution technique

[Ref.: #67770]	Sample type/isolated from	Gut of Omphisa fuscidentalis Hampson, which is a larva of a moth
[Ref.: #67770]	Host species	Omphisa fuscidentalis
[Ref.: #67770]	Geographic location (country and/or sea, region)	Xishuangbanna Dai Autonomous Pref.
[Ref.: #67770]	Country	China
[Ref.: #67770]	Country ISO 3 Code	CHN
[Ref.: #67770]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Host	#Arthropoda	#Insecta
#Host Body-Site	#Gastrointestinal tract	#Stomach

What are isolation sources categories?

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #25280]	Acinetobacter sp. BRTC-1 16S ribosomal RNA gene, partial sequence	KU560468	1524	GenBank	1789224 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Acinetobacter larvae BRTC-1	GCA_001704115	complete	GenBank	1789224 tax ID	*
[Ref.: #66792]	Acinetobacter sp. BRTC-1	1789224.3	complete	PATRIC	1789224 tax ID	*
[Ref.: #66792]	Acinetobacter larvae BRTC-1	2767802241	complete	JGI IMG/M	1789224 tax ID	*

[Ref.: #25280]	GC-content	41.6 mol%	sequence analysis
[Ref.: #67770]	GC-content	41.6 mol%	genome sequence analysis

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Acinetobacter larvae BRTC-1 NCBI: GCA_001704115.1
[Ref.: #69481]	spore-forming	no	100	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Acinetobacter larvae BRTC-1 NCBI: GCA_001704115.1
[Ref.: #69480]	flagellated	no	95.886	yes
[Ref.: #69480]	gram-positive	no	97.6	yes
[Ref.: #69480]	anaerobic	no	98.526	yes
[Ref.: #69480]	halophile	no	86.642	no
[Ref.: #69480]	spore-forming	no	96.538	yes
[Ref.: #69480]	glucose-util	no	83.991	yes
[Ref.: #69480]	aerobic	yes	90.176	yes
[Ref.: #69480]	thermophile	no	99.856	yes
[Ref.: #69480]	motile	no	91.279	yes
[Ref.: #69480]	glucose-ferment	no	90.257	yes

Availability in culture collections External links

[Ref.: #25280]

Culture collection no.

ACCC 19936, JCM 31367

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Acinetobacter larvae sp. nov., isolated from the larval gut of Omphisa fuscidentalis.	Liu S, Wang Y, Ruan Z, Ma K, Wu B, Xu Y, Wang J, You Y, He M, Hu G	Int J Syst Evol Microbiol	10.1099/ijsem.0.001644	2017	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#25280

S. W. Liu, Y.,Ruan, Z.,Ma, K.,Wu, B.,Xu, Y.,Wang, J.,You, Y.,He, M.,Hu, G.: Acinetobacter larvae sp. nov., isolated from the larval gut of Omphisa fuscidentalis. IJSEM 67: 806 - 811 2017 ( DOI 10.1099/ijsem.0.001644 , PubMed 27902257 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#66794

Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg: BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49: D498 - D508 2020 ( DOI 10.1093/nar/gkaa1025 , PubMed 33211880 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

* These data were automatically processed and therefore are not curated

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