Name: Legionella impletisoli OA1-1
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 6737

Type strain:

Species: Legionella impletisoli

Strain Designation: OA1-1

Culture col. no.: CCUG 55597, DSM 18493, JCM 13919

Strain history: H. Miyamoto OA1-1.

NCBI tax ID(s): 343510 (species)

SI-ID 309537

DSM 18493, JCM 13919, CCUG 55597

Section

Legionella impletisoli OA1-1 is a mesophilic, Gram-negative bacterium that was isolated from soil contaminated with industrial wastes.

Gram-negative
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	*Legionellales*
	Family	*Legionellaceae*
	Genus	*Legionella*
	Species	**Legionella impletisoli**
	Full Scientific Name (LPSN)	Legionella impletisoli Kuroki et al. 2007

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Gram stain	negative Confidence in %99.984

Information on culture and growth conditions Culture and growth conditions

[Ref.: #7561]

Culture medium

BCYE-AGAR (DSMZ Medium 585)

[Ref.: #7561]

Culture medium growth

[Ref.: #7561]

Culture medium link

Medium recipe at MediaDive

[Ref.: #7561]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #7561]			growth	37 °C
[Ref.: #67770]			growth	37 °C

[Ref.: #7561]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #69481]	Ability of spore formation	no Confidence in %100
[Ref.: #69480]	Ability of spore formation	no Confidence in %99.983

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #7561]	Sample type/isolated from	soil contaminated with industrial wastes
[Ref.: #7561]	Geographic location (country and/or sea, region)	Osaka
[Ref.: #7561]	Country	Japan
[Ref.: #7561]	Country ISO 3 Code	JPN
[Ref.: #7561]	Continent	Asia

[Ref.: #60663]	Sample type/isolated from	Landfill
[Ref.: #60663]	Country	Japan
[Ref.: #60663]	Country ISO 3 Code	JPN
[Ref.: #60663]	Continent	Asia

[Ref.: #67770]	Sample type/isolated from	Soil
* marker position based on {}

Isolation sources categories

#Engineered	#Contamination	-
#Engineered	#Waste	#Industrial waste
#Environmental	#Terrestrial	#Soil

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AB233209 (>99% sequence identity) for Legionella from Microbeatlas

Aquatic Samples	9
Soil Samples	8
Animal Samples	2
Plant Samples
Total Samples	19

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #7561]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #7561]	Legionella impletisoli mip gene for macrophage infectivity potenciator, partial cds, strain: OA1-1	AB233217	412	ENA	343510 tax ID
[Ref.: #67770]	Legionella impletisoli gene for 16S rRNA, partial sequence, strain: OA1-1	AB233209	1494	ENA	343510 tax ID
[Ref.: #20218]	Legionella impletisoli strain MDC1581 16S ribosomal RNA gene, partial sequence	JF720363	524	ENA	343510 tax ID	*

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Legionella impletisoli OA1-1	GCA_900639875	contig	GenBank	343510 tax ID
[Ref.: #66792]	Legionella impletisoli JCM 13919	GCA_014646855	scaffold	GenBank	343510 tax ID	*
[Ref.: #66792]	Legionella impletisoli strain JCM 13919	343510.4	wgs	PATRIC	343510 tax ID	*

[Ref.: #7561]	GC-content	40.5 mol%
[Ref.: #67770]	GC-content	40.5 mol%	high performance liquid chromatography (HPLC)

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Legionella impletisoli strain JCM 13919 PATRIC: 343510.3
[Ref.: #69481]	spore-forming	no	100	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Legionella impletisoli JCM 13919 NCBI: GCA_014646855.1
[Ref.: #69480]	flagellated	no	95.94	no
[Ref.: #69480]	gram-positive	no	98.589	no
[Ref.: #69480]	anaerobic	no	97.442	no
[Ref.: #69480]	aerobic	no	91.015	no
[Ref.: #69480]	halophile	no	75.993	no
[Ref.: #69480]	spore-forming	no	95.212	no
[Ref.: #69480]	thermophile	no	96.254	yes
[Ref.: #69480]	glucose-util	yes	74.189	no
[Ref.: #69480]	motile	no	67.672	no
[Ref.: #69480]	glucose-ferment	no	88.868	no

Availability in culture collections External links

[Ref.: #7561]

Culture collection no.

CCUG 55597, DSM 18493, JCM 13919

[Ref.: #76207]

SI-ID 309537

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Legionella impletisoli sp. nov. and Legionella yabuuchiae sp. nov., isolated from soils contaminated with industrial wastes in Japan.	Kuroki H, Miyamoto H, Fukuda K, Iihara H, Kawamura Y, Ogawa M, Wang Y, Ezaki T, Taniguchi H	Syst Appl Microbiol	10.1016/j.syapm.2006.11.005	2007	*

References

#7561

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 18493

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#60663 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 55597

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#76207

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID309537.1 )

* These data were automatically processed and therefore are not curated

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Legionella impletisoli strain JCM 13919

Legionella impletisoli JCM 13919

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