Name: Desulfovibrio desulfuricans MB
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 4077

Type strain:

Species: Desulfovibrio desulfuricans

Strain Designation: MB

Culture col. no.: DSM 6949, ATCC 27774

Strain history: <- ATCC <- M. P. Bryant, University of Illinois, Departments of Dairy Science and Microbiology, Urbana, USA; MB

NCBI tax ID(s): 525146 (strain), 876 (species)

SI-ID 39171

ATCC 27774, DSM 6949, NCIMB 12833

Other strains from Desulfovibrio desulfuricans

D. desulfuricans Essex 6, DSM 642, ATCC 29577, NCIMB ... (type strain)
D. desulfuricans El Agheila Z, DSM 1926, NCIMB 8380
D. desulfuricans DSM 1924, NCIMB 9467
D. desulfuricans STp, DSM 4369, VKM B-1800
D. desulfuricans CSN, DSM 9104
D. desulfuricans IC1, DSM 12129
D. desulfuricans CCUG 55332
D. desulfuricans CCUG 64305
D. desulfuricans CCUG 67268

Section

Desulfovibrio desulfuricans MB is an anaerobe, mesophilic, motile bacterium that was isolated from rumen, sheep.

motile
anaerobe
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Deltaproteobacteria*
	Order	*Desulfovibrionales*
	Family	*Desulfovibrionaceae*
	Genus	*Desulfovibrio*
	Species	**Desulfovibrio desulfuricans**
	Full Scientific Name (LPSN)	Desulfovibrio desulfuricans (Beijerinck 1895) Kluyver and van Niel 1936 (Approved Lists 1980)

Synonym

"Spirillum desulfuricans"

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Gram stain	negative Confidence in %99.999

[Ref.: #69480]	Motility	yes Confidence in %97.23

Information on culture and growth conditions Culture and growth conditions

[Ref.: #2921]

Culture medium

DESULFOVIBRIO (POSTGATE) MEDIUM (DSMZ Medium 63)

[Ref.: #2921]

Culture medium growth

[Ref.: #2921]

Culture medium link

Medium recipe at MediaDive

[Ref.: #2921]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #2921]			growth	37 °C

[Ref.: #2921]

Temperature range

mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #2921]	Oxygen tolerance	anaerobe
[Ref.: #69480]	Oxygen tolerance	anaerobe Confidence in %99.998

[Ref.: #69481]	Ability of spore formation	no Confidence in %100
[Ref.: #69480]	Ability of spore formation	no Confidence in %99.795

[Ref.: #2921]

Name of produced compound

restriction endonuclease DdsI (BamHI)

	Pathway	Enzyme coverage	Annotated reactions
	Pathway annotation	Computationally determined by
[Ref.: #66794]	reductive acetyl coenzyme A pathway	100	7 of 7
[Ref.: #66794]	aspartate and asparagine metabolism	100	9 of 9
[Ref.: #66794]	biotin biosynthesis	100	4 of 4
[Ref.: #66794]	L-lactaldehyde degradation	100	3 of 3
[Ref.: #66794]	chorismate metabolism	100	9 of 9
[Ref.: #66794]	1,4-dihydroxy-6-naphthoate biosynthesis	100	6 of 6
[Ref.: #66794]	palmitate biosynthesis	100	22 of 22
[Ref.: #66794]	cis-vaccenate biosynthesis	100	2 of 2
[Ref.: #66794]	ethanol fermentation	100	2 of 2
[Ref.: #66794]	methylglyoxal degradation	100	5 of 5
[Ref.: #66794]	coenzyme A metabolism	100	4 of 4
[Ref.: #66794]	folate polyglutamylation	100	1 of 1
[Ref.: #66794]	sulfopterin metabolism	100	4 of 4
[Ref.: #66794]	CDP-diacylglycerol biosynthesis	100	2 of 2
[Ref.: #66794]	anapleurotic synthesis of oxalacetate	100	1 of 1
[Ref.: #66794]	UDP-GlcNAc biosynthesis	100	3 of 3
[Ref.: #66794]	d-mannose degradation	88.89	8 of 9
[Ref.: #66794]	valine metabolism	88.89	8 of 9
[Ref.: #66794]	isoleucine metabolism	87.5	7 of 8
[Ref.: #66794]	ubiquinone biosynthesis	85.71	6 of 7
[Ref.: #66794]	vitamin B1 metabolism	84.62	11 of 13
[Ref.: #66794]	phenylalanine metabolism	84.62	11 of 13
[Ref.: #66794]	selenocysteine biosynthesis	83.33	5 of 6
[Ref.: #66794]	hydrogen production	80	4 of 5
[Ref.: #66794]	peptidoglycan biosynthesis	80	12 of 15
[Ref.: #66794]	lipoate biosynthesis	80	4 of 5
[Ref.: #66794]	threonine metabolism	80	8 of 10
[Ref.: #66794]	photosynthesis	78.57	11 of 14
[Ref.: #66794]	molybdenum cofactor biosynthesis	77.78	7 of 9
[Ref.: #66794]	vitamin B12 metabolism	76.47	26 of 34
[Ref.: #66794]	glycogen biosynthesis	75	3 of 4
[Ref.: #66794]	ppGpp biosynthesis	75	3 of 4
[Ref.: #66794]	acetate fermentation	75	3 of 4
[Ref.: #66794]	purine metabolism	74.47	70 of 94
[Ref.: #66794]	NAD metabolism	72.22	13 of 18
[Ref.: #66794]	cardiolipin biosynthesis	71.43	5 of 7
[Ref.: #66794]	tetrahydrofolate metabolism	71.43	10 of 14
[Ref.: #66794]	propanol degradation	71.43	5 of 7
[Ref.: #66794]	methionine metabolism	69.23	18 of 26
[Ref.: #66794]	alanine metabolism	68.97	20 of 29
[Ref.: #66794]	glutamate and glutamine metabolism	67.86	19 of 28
[Ref.: #66794]	acetoin degradation	66.67	2 of 3
[Ref.: #66794]	enterobactin biosynthesis	66.67	2 of 3
[Ref.: #66794]	serine metabolism	66.67	6 of 9
[Ref.: #66794]	formaldehyde oxidation	66.67	2 of 3
[Ref.: #66794]	flavin biosynthesis	66.67	10 of 15
[Ref.: #66794]	glycolate and glyoxylate degradation	66.67	4 of 6
[Ref.: #66794]	octane oxidation	66.67	2 of 3
[Ref.: #66794]	glycolysis	64.71	11 of 17
[Ref.: #66794]	heme metabolism	64.29	9 of 14
[Ref.: #66794]	gluconeogenesis	62.5	5 of 8
[Ref.: #66794]	C4 and CAM-carbon fixation	62.5	5 of 8
[Ref.: #66794]	pyrimidine metabolism	62.22	28 of 45
[Ref.: #66794]	oxidative phosphorylation	61.54	56 of 91
[Ref.: #66794]	sulfate reduction	61.54	8 of 13
[Ref.: #66794]	cysteine metabolism	61.11	11 of 18
[Ref.: #66794]	starch degradation	60	6 of 10
[Ref.: #66794]	glycogen metabolism	60	3 of 5
[Ref.: #66794]	isoprenoid biosynthesis	57.69	15 of 26
[Ref.: #66794]	citric acid cycle	57.14	8 of 14
[Ref.: #66794]	lysine metabolism	57.14	24 of 42
[Ref.: #66794]	nitrate assimilation	55.56	5 of 9
[Ref.: #66794]	proline metabolism	54.55	6 of 11
[Ref.: #66794]	pentose phosphate pathway	54.55	6 of 11
[Ref.: #66794]	leucine metabolism	53.85	7 of 13
[Ref.: #66794]	non-pathway related	52.63	20 of 38
[Ref.: #66794]	polyamine pathway	52.17	12 of 23
[Ref.: #66794]	toluene degradation	50	2 of 4
[Ref.: #66794]	phenylmercury acetate degradation	50	1 of 2
[Ref.: #66794]	CMP-KDO biosynthesis	50	2 of 4
[Ref.: #66794]	glutathione metabolism	50	7 of 14
[Ref.: #66794]	Entner Doudoroff pathway	50	5 of 10
[Ref.: #66794]	butanoate fermentation	50	2 of 4
[Ref.: #66794]	adipate degradation	50	1 of 2
[Ref.: #66794]	tryptophan metabolism	50	19 of 38
[Ref.: #66794]	ribulose monophosphate pathway	50	1 of 2
[Ref.: #66794]	dTDPLrhamnose biosynthesis	50	4 of 8
[Ref.: #66794]	glycine metabolism	50	5 of 10
[Ref.: #66794]	lactate fermentation	50	2 of 4
[Ref.: #66794]	suberin monomers biosynthesis	50	1 of 2
[Ref.: #66794]	aminopropanol phosphate biosynthesis	50	1 of 2
[Ref.: #66794]	histidine metabolism	48.28	14 of 29
[Ref.: #66794]	urea cycle	46.15	6 of 13
[Ref.: #66794]	arginine metabolism	45.83	11 of 24
[Ref.: #66794]	CO2 fixation in Crenarchaeota	44.44	4 of 9
[Ref.: #66794]	lipid A biosynthesis	44.44	4 of 9
[Ref.: #66794]	tyrosine metabolism	42.86	6 of 14
[Ref.: #66794]	O-antigen biosynthesis	40	2 of 5
[Ref.: #66794]	glycine betaine biosynthesis	40	2 of 5
[Ref.: #66794]	arachidonate biosynthesis	40	2 of 5
[Ref.: #66794]	factor 420 biosynthesis	40	2 of 5
[Ref.: #66794]	metabolism of amino sugars and derivatives	40	2 of 5
[Ref.: #66794]	degradation of hexoses	38.89	7 of 18
[Ref.: #66794]	ketogluconate metabolism	37.5	3 of 8
[Ref.: #66794]	6-hydroxymethyl-dihydropterin diphosphate biosynthesis	37.5	3 of 8
[Ref.: #66794]	metabolism of disaccharids	36.36	4 of 11
[Ref.: #66794]	lipid metabolism	35.48	11 of 31
[Ref.: #66794]	methane metabolism	33.33	1 of 3
[Ref.: #66794]	cyanate degradation	33.33	1 of 3
[Ref.: #66794]	acetyl CoA biosynthesis	33.33	1 of 3
[Ref.: #66794]	pantothenate biosynthesis	33.33	2 of 6
[Ref.: #66794]	IAA biosynthesis	33.33	1 of 3
[Ref.: #66794]	degradation of aromatic, nitrogen containing compounds	33.33	4 of 12
[Ref.: #66794]	degradation of pentoses	32.14	9 of 28
[Ref.: #66794]	ascorbate metabolism	31.82	7 of 22
[Ref.: #66794]	coenzyme M biosynthesis	30	3 of 10
[Ref.: #66794]	4-hydroxyphenylacetate degradation	30	3 of 10
[Ref.: #66794]	phenol degradation	30	6 of 20
[Ref.: #66794]	degradation of sugar acids	28	7 of 25
[Ref.: #66794]	vitamin B6 metabolism	27.27	3 of 11
[Ref.: #66794]	3-phenylpropionate degradation	26.67	4 of 15
[Ref.: #66794]	cyclohexanol degradation	25	1 of 4
[Ref.: #66794]	vitamin E metabolism	25	1 of 4
[Ref.: #66794]	alginate biosynthesis	25	1 of 4
[Ref.: #66794]	degradation of sugar alcohols	25	4 of 16
[Ref.: #66794]	phenylpropanoid biosynthesis	23.08	3 of 13
[Ref.: #66794]	4-hydroxymandelate degradation	22.22	2 of 9
		Only first 10 entries are displayed. Click here to see all.

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #2921]	Sample type/isolated from	rumen, sheep
* marker position based on {}

Isolation sources categories

#Host	#Mammals	#Caprinae (Sheep/Goat)
#Host Body-Site	#Organ	#Rumen

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AF192154 (>99% sequence identity) for Desulfovibrio from Microbeatlas

Aquatic Samples	1287
Soil Samples	94
Animal Samples	4291
Plant Samples	116
Total Samples	5788

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #2921]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #2921]	Desulfovibrio desulfuricans subsp. desulfuricans strain MB 16S ribosomal RNA gene, complete sequence	AF192154	1542	ENA	876 tax ID
[Ref.: #20218]	Desulfovibrio desulfuricans subsp. desulfuricans MB 16S-23S internal transcribed spacer region, partial sequence	AY033880	396	ENA	525146 tax ID	*
[Ref.: #20218]	D.desulfuricans ATCC 27774 16S rRNA region	A30645	48	ENA	876 tax ID	*

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774	525146.4	complete	PATRIC	525146 tax ID	*
[Ref.: #66792]	Desulfovibrio desulfuricans desulfuricans ATCC 27774	643348538	complete	JGI IMG/M	525146 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 PATRIC: 525146.4
[Ref.: #69481]	spore-forming	no	100	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 PATRIC: 525146.4
[Ref.: #69480]	gram-positive	no	98.412	no
[Ref.: #69480]	anaerobic	yes	99.302	yes
[Ref.: #69480]	halophile	no	90.834	no
[Ref.: #69480]	spore-forming	no	92.831	no
[Ref.: #69480]	glucose-util	no	68.047	no
[Ref.: #69480]	aerobic	no	98.507	no
[Ref.: #69480]	motile	yes	87.827	no
[Ref.: #69480]	flagellated	no	56.133	no
[Ref.: #69480]	thermophile	no	86.389	yes
[Ref.: #69480]	glucose-ferment	no	77.174	no

Availability in culture collections External links

[Ref.: #2921]

Culture collection no.

DSM 6949, ATCC 27774

[Ref.: #73580]

SI-ID 39171

Literature:

Only first 10 entries are displayed. Click here to see all.

Topic	Title	Authors	Journal	DOI	Year
Metabolism	Bismuth(III) interactions with Desulfovibrio desulfuricans: inhibition of cell energetics and nanocrystal formation of Bi2S3 and Bi(0).	Barton LL, Granat AS, Lee S, Xu H, Ritz NL, Hider R, Lin HC	Biometals	10.1007/s10534-019-00213-4	2019	*
Metabolism	Understanding the response of Desulfovibrio desulfuricans ATCC 27774 to the electron acceptors nitrate and sulfate - biosynthetic costs modulate substrate selection.	Sousa JR, Silveira CM, Fontes P, Roma-Rodrigues C, Fernandes AR, Van Driessche G, Devreese B, Moura I, Moura JJG, Almeida MG	Biochim Biophys Acta Proteins Proteom	10.1016/j.bbapap.2017.07.021	2017	*
Metabolism	Regulation, sensory domains and roles of two Desulfovibrio desulfuricans ATCC27774 Crp family transcription factors, HcpR1 and HcpR2, in response to nitrosative stress.	Cadby IT, Ibrahim SA, Faulkner M, Lee DJ, Browning D, Busby SJ, Lovering AL, Stapleton MR, Green J, Cole JA	Mol Microbiol	10.1111/mmi.13540	2016	*
Pathogenicity	Bismuth(III) deferiprone effectively inhibits growth of Desulfovibrio desulfuricans ATCC 27774.	Barton LL, Lyle DA, Ritz NL, Granat AS, Khurshid AN, Kherbik N, Hider R, Lin HC	Biometals	10.1007/s10534-016-9917-5	2016	*
Enzymology	Electron transfer between the QmoABC membrane complex and adenosine 5'-phosphosulfate reductase.	Duarte AG, Santos AA, Pereira IA	Biochim Biophys Acta	10.1016/j.bbabio.2016.01.001	2016	*
Metabolism	Electron transfer between periplasmic formate dehydrogenase and cytochromes c in Desulfovibrio desulfuricans ATCC 27774.	da Silva SM, Pacheco I, Pereira IA	J Biol Inorg Chem	10.1007/s00775-012-0900-5	2012	*
Metabolism	An HcpR homologue from Desulfovibrio desulfuricans and its possible role in nitrate reduction and nitrosative stress.	Cadby IT, Busby SJ, Cole JA	Biochem Soc Trans	10.1042/BST0390224	2011	*
Metabolism	Redox linked conformational changes in cytochrome c3 from Desulfovibrio desulfuricans ATCC 27774.	Paixao VB, Vis H, Turner DL	Biochemistry	10.1021/bi101237w	2010	*
Enzymology	Measuring the cytochrome C nitrite reductase activity-practical considerations on the enzyme assays.	Silveira CM, Besson S, Moura I, Moura JJ, Almeida MG	Bioinorg Chem Appl	10.1155/2010/634597	2010	*
Enzymology	A novel nitrite biosensor based on conductometric electrode modified with cytochrome c nitrite reductase composite membrane.	Zhang Z, Xia S, Leonard D, Jaffrezic-Renault N, Zhang J, Bessueille F, Goepfert Y, Wang X, Chen L, Zhu Z, Zhao J, Almeida MG, Silveira CM	Biosens Bioelectron	10.1016/j.bios.2008.08.010	2008	*
Enzymology	Purification, crystallization and preliminary X-ray diffraction analysis of adenosine triphosphate sulfurylase (ATPS) from the sulfate-reducing bacterium Desulfovibrio desulfuricans ATCC 27774.	Gavel OY, Kladova AV, Bursakov SA, Dias JM, Texeira S, Shnyrov VL, Moura JJ, Moura I, Romao MJ, Trincao J	Acta Crystallogr Sect F Struct Biol Cryst Commun	10.1107/S1744309108008816	2008	*
Enzymology	A new type of metal-binding site in cobalt- and zinc-containing adenylate kinases isolated from sulfate-reducers Desulfovibrio gigas and Desulfovibrio desulfuricans ATCC 27774.	Gavel OY, Bursakov SA, Di Rocco G, Trincao J, Pickering IJ, George GN, Calvete JJ, Shnyrov VL, Brondino CD, Pereira AS, Lampreia J, Tavares P, Moura JJ, Moura I	J Inorg Biochem	10.1016/j.jinorgbio.2008.01.023	2008	*
Enzymology	Periplasmic nitrate reductase revisited: a sulfur atom completes the sixth coordination of the catalytic molybdenum.	Najmudin S, Gonzalez PJ, Trincao J, Coelho C, Mukhopadhyay A, Cerqueira NM, Romao CC, Moura I, Moura JJ, Brondino CD, Romao MJ	J Biol Inorg Chem	10.1007/s00775-008-0359-6	2008	*
Proteome	Simplifying sample handling for protein identification by peptide mass fingerprint using matrix-assisted laser desorption/ionization time-of-flight mass spectrometry.	Cordeiro FM, Carreira RJ, Rial-Otero R, Rivas MG, Moura I, Capelo JL	Rapid Commun Mass Spectrom	10.1002/rcm.3214	2007	*
Enzymology	Ultrasonic assisted protein enzymatic digestion for fast protein identification by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry. Sonoreactor versus ultrasonic probe.	Rial-Otero R, Carreira RJ, Cordeiro FM, Moro AJ, Santos HM, Vale G, Moura I, Capelo JL	J Chromatogr A	10.1016/j.chroma.2007.08.013	2007	*
Metabolism	Improving sample treatment for in-solution protein identification by peptide mass fingerprint using matrix-assisted laser desorption/ionization time-of-flight mass spectrometry.	Santos HM, Rial-Otero R, Fernandes L, Vale G, Rivas MG, Moura I, Capelo JL	J Proteome Res	10.1021/pr0702518	2007	*
Enzymology	EPR characterization of the molybdenum(V) forms of formate dehydrogenase from Desulfovibrio desulfuricans ATCC 27774 upon formate reduction.	Rivas MG, Gonzalez PJ, Brondino CD, Moura JJ, Moura I	J Inorg Biochem	10.1016/j.jinorgbio.2007.04.011	2007	*
Enzymology	Sonoreactor-based technology for fast high-throughput proteolytic digestion of proteins.	Rial-Otero R, Carreira RJ, Cordeiro FM, Moro AJ, Fernandes L, Moura I, Capelo JL	J Proteome Res	10.1021/pr060508m	2007	*
Metabolism	The anaerobe Desulfovibrio desulfuricans ATCC 27774 grows at nearly atmospheric oxygen levels.	Lobo SA, Melo AM, Carita JN, Teixeira M, Saraiva LM	FEBS Lett	10.1016/j.febslet.2006.12.053	2007	*
Metabolism	The bacterial metallome: composition and stability with specific reference to the anaerobic bacterium Desulfovibrio desulfuricans.	Barton LL, Goulhen F, Bruschi M, Woodards NA, Plunkett RM, Rietmeijer FJ	Biometals	10.1007/s10534-006-9059-2	2007	*
Enzymology	A needle in a haystack: the active site of the membrane-bound complex cytochrome c nitrite reductase.	Almeida MG, Silveira CM, Guigliarelli B, Bertrand P, Moura JJ, Moura I, Leger C	FEBS Lett	10.1016/j.febslet.2006.12.023	2006	*
Metabolism	The role of the hybrid cluster protein in oxidative stress defense.	Almeida CC, Romao CV, Lindley PF, Teixeira M, Saraiva LM	J Biol Chem	10.1074/jbc.M605888200	2006	*
Enzymology	EPR and redox properties of periplasmic nitrate reductase from Desulfovibrio desulfuricans ATCC 27774.	Gonzalez PJ, Rivas MG, Brondino CD, Bursakov SA, Moura I, Moura JJ	J Biol Inorg Chem	10.1007/s00775-006-0110-0	2006	*
Metabolism	Characterization of the Desulfovibrio desulfuricans ATCC 27774 DsrMKJOP complex--a membrane-bound redox complex involved in the sulfate respiratory pathway.	Pires RH, Venceslau SS, Morais F, Teixeira M, Xavier AV, Pereira IA	Biochemistry	10.1021/bi0515265	2006	*
Enzymology	The isolation and characterization of cytochrome c nitrite reductase subunits (NrfA and NrfH) from Desulfovibrio desulfuricans ATCC 27774. Re-evaluation of the spectroscopic data and redox properties.	Almeida MG, Macieira S, Goncalves LL, Huber R, Cunha CA, Romao MJ, Costa C, Lampreia J, Moura JJ, Moura I	Eur J Biochem	10.1046/j.1432-1033.2003.03772.x	2003	*
Enzymology	A novel membrane-bound respiratory complex from Desulfovibrio desulfuricans ATCC 27774.	Pires RH, Lourenco AI, Morais F, Teixeira M, Xavier AV, Saraiva LM, Pereira IA	Biochim Biophys Acta	10.1016/s0005-2728(03)00065-3	2003	*
Enzymology	Reduced hybrid cluster proteins (HCP) from Desulfovibrio desulfuricans ATCC 27774 and Desulfovibrio vulgaris (Hildenborough): X-ray structures at high resolution using synchrotron radiation.	Aragao D, Macedo S, Mitchell EP, Romao CV, Liu MY, Frazao C, Saraiva LM, Xavier AV, LeGall J, van Dongen WMAM, Hagen WR, Teixeira M, Carrondo MA, Lindley P	J Biol Inorg Chem	10.1007/s00775-003-0443-x	2003	*
Metabolism	Redox-Bohr and other cooperativity effects in the nine-heme cytochrome C from Desulfovibrio desulfuricans ATCC 27774: crystallographic and modeling studies.	Bento I, Teixeira VH, Baptista AM, Soares CM, Matias PM, Carrondo MA	J Biol Chem	10.1074/jbc.M301745200	2003	*
Enzymology	Cytochrome c nitrite reductase from Desulfovibrio desulfuricans ATCC 27774. The relevance of the two calcium sites in the structure of the catalytic subunit (NrfA).	Cunha CA, Macieira S, Dias JM, Almeida G, Goncalves LL, Costa C, Lampreia J, Huber R, Moura JJ, Moura I, Romao MJ	J Biol Chem	10.1074/jbc.M211777200	2003	*
Metabolism	A novel iron centre in the split-Soret cytochrome c from Desulfovibrio desulfuricans ATCC 27774.	Abreu IA, Lourenco AI, Xavier AV, LeGall J, Coelho AV, Matias PM, Pinto DM, Armenia Carrondo M, Teixeira M, Saraiva LM	J Biol Inorg Chem	10.1007/s00775-002-0426-3	2002	*
Metabolism	Cooperativity between electrons and protons in a monomeric cytochrome c(3): the importance of mechano-chemical coupling for energy transduction.	Louro RO, Catarino T, LeGall J, Turner DL, Xavier AV	Chembiochem	10.1002/1439-7633(20011105)2:11<831::AID-CBIC831>3.0.CO;2-W	2001	*
Enzymology	Hybrid cluster proteins (HCPs) from Desulfovibrio desulfuricans ATCC 27774 and Desulfovibrio vulgaris (Hildenborough): X-ray structures at 1.25 A resolution using synchrotron radiation.	Macedo S, Mitchell EP, Romao CV, Cooper SJ, Coelho R, Liu MY, Xavier AV, LeGall J, Bailey S, Garner DC, Hagen WR, Teixeira M, Carrondo MA, Lindley P	J Biol Inorg Chem	10.1007/s00775-001-0326-y	2002	*
Enzymology	The 1.25 A resolution structure of the diheme NapB subunit of soluble nitrate reductase reveals a novel cytochrome c fold with a stacked heme arrangement.	Brige A, Leys D, Meyer TE, Cusanovich MA, Van Beeumen JJ	Biochemistry	10.1021/bi012144b	2002	*
Metabolism	Conformational component in the coupled transfer of multiple electrons and protons in a monomeric tetraheme cytochrome.	Louro RO, Bento I, Matias PM, Catarino T, Baptista AM, Soares CM, Carrondo MA, Turner DL, Xavier AV	J Biol Chem	10.1074/jbc.M107136200	2001	*
Enzymology	In the facultative sulphate/nitrate reducer Desulfovibrio desulfuricans ATCC 27774, the nine-haem cytochrome c is part of a membrane-bound redox complex mainly expressed in sulphate-grown cells.	Saraiva LM, da Costa PN, Conte C, Xavier AV, LeGall J	Biochim Biophys Acta	10.1016/s0167-4781(01)00250-0	2001	*
Stress	Equilibrium unfolding of dimeric desulfoferrodoxin involves a monomeric intermediate: iron cofactors dissociate after polypeptide unfolding.	Apiyo D, Jones K, Guidry J, Wittung-Stafshede P	Biochemistry	10.1021/bi002653y	2001	*
Enzymology	[NiFe] hydrogenase from Desulfovibrio desulfuricans ATCC 27774: gene sequencing, three-dimensional structure determination and refinement at 1.8 A and modelling studies of its interaction with the tetrahaem cytochrome c3.	Matias PM, Soares CM, Saraiva LM, Coelho R, Morais J, Le Gall J, Carrondo MA	J Biol Inorg Chem	10.1007/s007750000167	2001	*
Enzymology	Structure determination of bacterioferritin from Desulfovibrio desulfuricans by the MAD method at the Fe K-edge.	Coelho AV, Macedo S, Matias PM, Thompson AW, LeGall J, Carrondo MA	Acta Crystallogr D Biol Crystallogr	10.1107/s0907444900015286	2001	*
Metabolism	Nonaheme cytochrome c, a new physiological electron acceptor for [Ni,Fe] hydrogenase in the sulfate-reducing bacterium Desulfovibrio desulfuricans Essex: primary sequence, molecular parameters, and redox properties.	Fritz G, Griesshaber D, Seth O, Kroneck PM	Biochemistry	10.1021/bi001480+	2001	*
Genetics	A bacterioferritin from the strict anaerobe Desulfovibrio desulfuricans ATCC 27774.	Romao CV, Regalla M, Xavier AV, Teixeira M, Liu MY, Le Gall J	Biochemistry	10.1021/bi992525d	2000	*
Enzymology	Thermostabilization of proteins by diglycerol phosphate, a new compatible solute from the hyperthermophile Archaeoglobus fulgidus.	Lamosa P, Burke A, Peist R, Huber R, Liu MY, Silva G, Rodrigues-Pousada C, LeGall J, Maycock C, Santos H	Appl Environ Microbiol	10.1128/AEM.66.5.1974-1979.2000	2000	*
Metabolism	Gene sequence and crystal structure of the aldehyde oxidoreductase from Desulfovibrio desulfuricans ATCC 27774.	Rebelo J, Macieira S, Dias JM, Huber R, Ascenso CS, Rusnak F, Moura JJ, Moura I, Romao MJ	J Mol Biol	10.1006/jmbi.2000.3552	2000	*
Enzymology	Biochemical/spectroscopic characterization and preliminary X-ray analysis of a new aldehyde oxidoreductase isolated from Desulfovibrio desulfuricans ATCC 27774.	Duarte RO, Archer M, Dias JM, Bursakov S, Huber R, Moura I, Romao MJ, Moura JJ	Biochem Biophys Res Commun	10.1006/bbrc.2000.2135	2000	*
Metabolism	Expression of a Desulfovibrio tetraheme cytochrome c in Escherichia coli.	da Costa PN, Conte C, Saraiva LM	Biochem Biophys Res Commun	10.1006/bbrc.2000.2198	2000	*
Enzymology	Crystallization and preliminary X-ray analysis of a membrane-bound nitrite reductase from Desulfovibrio desulfuricans ATCC 27774.	Dias JM, Cunha CA, Teixeira S, Almeida G, Costa C, Lampreia J, Moura JJ, Moura I, Romao MJ	Acta Crystallogr D Biol Crystallogr	10.1107/s0907444999016066	2000	*
Genetics	Nine-haem cytochrome c from Desulfovibrio desulfuricans ATCC 27774:primary sequence determination, crystallographic refinement at 1.8 and modelling studies of its interaction with the tetrahaem cytochrome c3.	Matias PM, Saraiva LM, Soares CM, Coelho AV, LeGall J, Carrondo MA	J Biol Inorg Chem	10.1007/s007750050334	1999	*
Genetics	Sequencing the gene encoding desulfovibrio desulfuricans ATCC 27774 nine-heme cytochrome c.	Saraiva LM, da Costa PN, LeGall J	Biochem Biophys Res Commun	10.1006/bbrc.1999.1238	1999	*
Enzymology	Crystal structure of the first dissimilatory nitrate reductase at 1.9 A solved by MAD methods.	Dias JM, Than ME, Humm A, Huber R, Bourenkov GP, Bartunik HD, Bursakov S, Calvete J, Caldeira J, Carneiro C, Moura JJ, Moura I, Romao MJ	Structure	10.1016/s0969-2126(99)80010-0	1999	*
Genetics	The primary and three-dimensional structures of a nine-haem cytochrome c from Desulfovibrio desulfuricans ATCC 27774 reveal a new member of the Hmc family.	Matias PM, Coelho R, Pereira IA, Coelho AV, Thompson AW, Sieker LC, Gall JL, Carrondo MA	Structure	10.1016/S0969-2126(99)80019-7	1999	*
Metabolism	The superoxide dismutase activity of desulfoferrodoxin from Desulfovibrio desulfuricans ATCC 27774.	Romao CV, Liu MY, Le Gall J, Gomes CM, Braga V, Pacheco I, Xavier AV, Teixeira M	Eur J Biochem	10.1046/j.1432-1327.1999.00278.x	1999	*
Enzymology	Crystallization and preliminary x-ray analysis of a nitrate reductase from Desulfovibrio desulfuricans ATCC 27774.	Dias JM, Bursakov S, Carneiro C, Moura JJ, Moura I, Romao MJ	Acta Crystallogr D Biol Crystallogr	10.1107/s0907444998014735	1999	*
Metabolism	ATP sulfurylases from sulfate-reducing bacteria of the genus Desulfovibrio. A novel metalloprotein containing cobalt and zinc.	Gavel OY, Bursakov SA, Calvete JJ, George GN, Moura JJ, Moura I	Biochemistry	10.1021/bi9816709	1998	*
Phylogeny	Characterisation of a new rubredoxin isolated from Desulfovibrio desulfuricans 27774: definition of a new family of rubredoxins.	LeGall J, Liu MY, Gomes CM, Braga V, Pacheco I, Regalla M, Xavier AV, Teixeira M	FEBS Lett	10.1016/s0014-5793(98)00610-3	1998	*
Enzymology	Spectroscopic characterization of a novel tetranuclear Fe cluster in an iron-sulfur protein isolated from Desulfovibrio desulfuricans.	Tavares P, Pereira AS, Krebs C, Ravi N, Moura JJ, Moura I, Huynh BH	Biochemistry	10.1021/bi9723008	1998	*
Enzymology	Enzymatic properties and effect of ionic strength on periplasmic nitrate reductase (NAP) from Desulfovibrio desulfuricans ATCC 27774.	Bursakov SA, Carneiro C, Almendra MJ, Duarte RO, Caldeira J, Moura I, Moura JJ	Biochem Biophys Res Commun	10.1006/bbrc.1997.7560	1997	*
Genetics	The primary structure of the split-Soret cytochrome c from Desulfovibrio desulfuricans ATCC 27774 reveals an unusual type of diheme cytochrome c.	Devreese B, Costa C, Demol H, Papaefthymiou V, Moura I, Moura JJ, Van Beeumen J	Eur J Biochem	10.1111/j.1432-1033.1997.00445.x	1997	*
Enzymology	Redox properties of cytochrome c nitrite reductase from Desulfovibrio desulfuricans ATCC 27774.	Costa C, Moura JJ, Moura I, Wang Y, Huynh BH	J Biol Chem	S0021-9258(18)40264-5	1996	*
Enzymology	Nitrite reductase from Desulfovibrio desulfuricans (ATCC 27774)--a heterooligomer heme protein with sulfite reductase activity.	Pereira IC, Abreu IA, Xavier AV, LeGall J, Teixeira M	Biochem Biophys Res Commun	10.1006/bbrc.1996.1074	1996	*
Metabolism	Crystal structure of flavodoxin from Desulfovibrio desulfuricans ATCC 27774 in two oxidation states.	Romero A, Caldeira J, Legall J, Moura I, Moura JJ, Romao MJ	Eur J Biochem	10.1111/j.1432-1033.1996.0190u.x	1996	*
Metabolism	Preliminary crystallographic analysis of the oxidized form of a two mono-nuclear iron centres protein from Desulfovibrio desulfuricans ATCC 27774.	Coelho AV, Matias PM, Carrondo MA, Tavares P, Moura JJ, Moura I, Fulop V, Hajdu J, Le Gall J	Protein Sci	10.1002/pro.5560050622	1996	*
Genetics	Primary structure of desulfoferrodoxin from Desulfovibrio desulfuricans ATCC 27774, a new class of non-heme iron proteins.	Devreese B, Tavares P, Lampreia J, Van Damme N, Le Gall J, Moura JJ, Van Beeumen J, Moura I	FEBS Lett	10.1016/0014-5793(96)00364-x	1996	*
Metabolism	Bidirectional transformation of aromatic aldehydes by Desulfovibrio desulfuricans under nitrate-dissimilating conditions.	Parekh M, Drake HL, Daniel SL	Lett Appl Microbiol	10.1111/j.1472-765x.1996.tb01122.x	1996	*
Enzymology	Structure of the tetraheme cytochrome from Desulfovibrio desulfuricans ATCC 27774: X-ray diffraction and electron paramagnetic resonance studies.	Morais J, Palma PN, Frazao C, Caldeira J, LeGall J, Moura I, Moura JJ, Carrondo MA	Biochemistry	10.1021/bi00039a044	1995	*
Phylogeny	Characterization of Lawsonia intracellularis gen. nov., sp. nov., the obligately intracellular bacterium of porcine proliferative enteropathy.	McOrist S, Gebhart CJ, Boid R, Barns SM	Int J Syst Bacteriol	10.1099/00207713-45-4-820	1995	*
Enzymology	Electrochemical studies on nitrite reductase towards a biosensor.	Scharf M, Moreno C, Costa C, Van Dijk C, Payne WJ, LeGall J, Moura I, Moura JJ	Biochem Biophys Res Commun	10.1006/bbrc.1995.1599	1995	*
Enzymology	Isolation and preliminary characterization of a soluble nitrate reductase from the sulfate reducing organism Desulfovibrio desulfuricans ATCC 27774.	Bursakov S, Liu MY, Payne WJ, LeGall J, Moura I, Moura JJ	Anaerobe	10.1016/s1075-9964(95)80444-7	1995	*
Enzymology	Overproduction of the prismane protein from Desulfovibrio desulfuricans ATCC 27774 in Desulfovibrio vulgaris (Hildenborough) and EPR spectroscopy of the [6Fe-6S] cluster in different redox states.	van den Berg WA, Stevens AA, Verhagen MF, van Dongen WM, Hagen WR	Biochim Biophys Acta	10.1016/0167-4838(94)90214-3	1994	*
Genetics	Evidence for a ternary complex formed between flavodoxin and cytochrome c3: 1H-NMR and molecular modeling studies.	Palma PN, Moura I, LeGall J, Van Beeumen J, Wampler JE, Moura JJ	Biochemistry	10.1021/bi00187a003	1994	*
Genetics	Primary sequence, oxidation-reduction potentials and tertiary-structure prediction of Desulfovibrio desulfuricans ATCC 27774 flavodoxin.	Caldeira J, Palma PN, Regalla M, Lampreia J, Calvete J, Schafer W, Legall J, Moura I, Moura JJ	Eur J Biochem	10.1111/j.1432-1033.1994.tb18703.x	1994	*
Phylogeny	Ileal symbiont intracellularis, an obligate intracellular bacterium of porcine intestines showing a relationship to Desulfovibrio species.	Gebhart CJ, Barns SM, McOrist S, Lin GF, Lawson GH	Int J Syst Bacteriol	10.1099/00207713-43-3-533	1993	*
Enzymology	Electrochemical studies of the hexaheme nitrite reductase from Desulfovibrio desulfuricans ATCC 27774.	Moreno C, Costa C, Moura I, Le Gall J, Liu MY, Payne WJ, van Dijk C, Moura JJ	Eur J Biochem	10.1111/j.1432-1033.1993.tb17635.x	1993	*
Enzymology	The primary structure of a protein containing a putative [6Fe-6S] prismane cluster from Desulfovibrio desulfuricans (ATCC 27774).	Stokkermans JP, van den Berg WA, van Dongen WM, Veeger C	Biochim Biophys Acta	10.1016/0167-4781(92)90057-7	1992	*
Enzymology	Plasmid transfer by conjugation in Desulfovibrio desulfuricans.	Argyle JL, Rapp-Giles BJ, Wall JD	FEMS Microbiol Lett	10.1016/0378-1097(92)90640-a	1992	*
Phylogeny	Purification and biochemical characterization of a putative [6Fe-6S] prismane-cluster-containing protein from Desulfovibrio vulgaris (Hildenborough).	Pierik AJ, Wolbert RB, Mutsaers PH, Hagen WR, Veeger C	Eur J Biochem	10.1111/j.1432-1033.1992.tb16976.x	1992	*
Enzymology	Direct spectroscopic evidence for the presence of a 6Fe cluster in an iron-sulfur protein isolated from Desulfovibrio desulfuricans (ATCC 27774)	Moura I, Tavares P, Moura JJ, Ravi N, Huynh BH, Liu MY, LeGall J	J Biol Chem	S0021-9258(18)42859-1	1992	*
Metabolism	In vivo 31P-NMR studies of Desulfovibrio species. Detection of a novel phosphorus-containing compound.	Santos H, Fareleira P, Pedregal C, LeGall J, Xavier AV	Eur J Biochem	10.1111/j.1432-1033.1991.tb16285.x	1991	*
Enzymology	Purification and characterization of desulfoferrodoxin. A novel protein from Desulfovibrio desulfuricans (ATCC 27774) and from Desulfovibrio vulgaris (strain Hildenborough) that contains a distorted rubredoxin center and a mononuclear ferrous center.	Moura I, Tavares P, Moura JJ, Ravi N, Huynh BH, Liu MY, LeGall J	J Biol Chem	S0021-9258(18)45782-1	1990	*
Enzymology	Hexaheme nitrite reductase from Desulfovibrio desulfuricans. Mossbauer and EPR characterization of the heme groups.	Costa C, Moura JJ, Moura I, Liu MY, Peck HD Jr, LeGall J, Wang YN, Huynh BH	J Biol Chem	S0021-9258(18)77313-4	1990	*
Metabolism	Cytochrome components of nitrate- and sulfate-respiring Desulfovibrio desulfuricans ATCC 27774.	Liu MC, Costa C, Coutinho IB, Moura JJ, Moura I, Xavier AV, LeGall J	J Bacteriol	10.1128/jb.170.12.5545-5551.1988	1988	*
Enzymology	Properties of a hydrogen-inhibited mutant of Desulfovibrio desulfuricans ATCC 27774.	Odom JM, Wall JD	J Bacteriol	10.1128/jb.169.3.1335-1337.1987	1987	*
Enzymology	The isolation of a hexaheme cytochrome from Desulfovibrio desulfuricans and its identification as a new type of nitrite reductase.	Liu MC, Peck HD Jr	J Biol Chem	S0021-9258(18)43021-9	1981	*
Phylogeny	Reclassification of the only species of the genus Desulfomonas, Desulfomonas pigra, as Desulfovibrio piger comb. nov.	Loubinoux J, Valente FM, Pereira IA, Costa A, Grimont PA, Le Faou AE	Int J Syst Evol Microbiol	10.1099/00207713-52-4-1305	2002	*
Genetics	Spectroscopic investigation and determination of reactivity and structure of the tetraheme cytochrome c3 from Desulfovibrio desulfuricans Essex 6.	Einsle O, Foerster S, Mann K, Fritz G, Messerschmidt A, Kroneck PM	Eur J Biochem	10.1046/j.1432-1327.2001.02195.x	2001	*
Phylogeny	Isolation of Desulfovibrio intestinalis sp. nov. from the hindgut' of the lower termite Mastotermes darwiniensis.	Frohlich J, Sass H, Babenzien HD, Kuhnigk T, Varma A, Saxena S, Nalepa C, Pfeiffer P, Konig H	Can J Microbiol	10.1139/w98-222	1999	*
	Molecular basis for redox-Bohr and cooperative effects in cytochrome c3 from Desulfovibrio desulfuricans ATCC 27774: crystallographic and modeling studies of oxidized and reduced high-resolution structures at pH 7.6.	Bento I, Matias PM, Baptista AM, da Costa PN, van Dongen WM, Saraiva LM, Schneider TR, Soares CM, Carrondo MA	Proteins	10.1002/prot.10431	2004	*
	Structure of the hybrid cluster protein (HCP) from Desulfovibrio desulfuricans ATCC 27774 containing molecules in the oxidized and reduced states.	Macedo S, Aragao D, Mitchell EP, Lindley P	Acta Crystallogr D Biol Crystallogr	10.1107/s0907444903025861	2003	*
	Iron-coproporphyrin III is a natural cofactor in bacterioferritin from the anaerobic bacterium Desulfovibrio desulfuricans.	Romao CV, Louro R, Timkovich R, Lubben M, Liu MY, LeGall J, Xavier AV, Teixeira M	FEBS Lett	10.1016/s0014-5793(00)01939-6	2000	*
	Preliminary crystallographic analysis and further characterization of a dodecaheme cytochrome c from Desulfovibrio desulfuricans ATCC 27774.	Coelho AV, Matias PM, Sieker LC, Morais J, Carrondo MA, Lampreia J, Costa C, Moura JJ, Moura I, Le Gall J	Acta Crystallogr D Biol Crystallogr	10.1107/S090744499600738X	1996	*
	Spectroscopic properties of desulfoferrodoxin from Desulfovibrio desulfuricans (ATCC 27774).	Tavares P, Ravi N, Moura JJ, LeGall J, Huang YH, Crouse BR, Johnson MK, Huynh BH, Moura I	J Biol Chem	S0021-9258(17)34088-7	1994	*
	Crystallization and preliminary X-ray diffraction analysis of tetra-heme cytochrome c3 from sulfate- and nitrate-reducing Desulfovibrio desulfuricans ATCC 27774.	Frazao C, Morais J, Matias PM, Carrondo MA	Acta Crystallogr D Biol Crystallogr	10.1107/S0907444993011631	1994	*

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Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 6949

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Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

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Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

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Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg: BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49: D498 - D508 2020 ( DOI 10.1093/nar/gkaa1025 , PubMed 33211880 )

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Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

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Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

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Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID39171.1 )

* These data were automatically processed and therefore are not curated

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Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774

Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774

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