Name: Burkholderia territorii MSMB110
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 156825

Type strain:

Species: Burkholderia territorii

Strain Designation: MSMB110, R-52241

Culture col. no.: CCUG 65687, LMG 28158, DSM 107636, CCUG 6568

Strain history: <- LMG; LMG 28158 <- P. Vandamme, Univ. Ghent, Belgium; R-52241 <- B.J. Currie, Menzies School of Health Research, Darwin, Australia; MSMB110

NCBI tax ID(s): 1503055 (species)

SI-ID 392198

LMG 28158, CCUG 65687

Section

Burkholderia territorii MSMB110 is an aerobe, mesophilic bacterium that was isolated from Water.

aerobe
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Betaproteobacteria*
	Order	*Burkholderiales*
	Family	*Burkholderiaceae*
	Genus	*Burkholderia*
	Species	**Burkholderia territorii**
	Full Scientific Name (LPSN)	Burkholderia territorii De Smet et al. 2015

Information on culture and growth conditions Culture and growth conditions

[Ref.: #64778]

Culture medium

TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535)

[Ref.: #64778]

Culture medium growth

[Ref.: #64778]

Culture medium link

Medium recipe at MediaDive

[Ref.: #64778]

Culture medium composition

expand / minimize

[Ref.: #64778]

Culture medium

COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)

[Ref.: #64778]

Culture medium growth

[Ref.: #64778]

Culture medium link

Medium recipe at MediaDive

[Ref.: #64778]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #63249]			growth	30 °C
[Ref.: #64778]			growth	30 °C

[Ref.: #63249]	Temperature range	mesophilic
[Ref.: #64778]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #63249]

Oxygen tolerance

aerobe

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #63249]	Sample type/isolated from	Water
[Ref.: #63249]	Sampling date	2003
[Ref.: #63249]	Geographic location (country and/or sea, region)	Northern Territory
[Ref.: #63249]	Country	Australia
[Ref.: #63249]	Country ISO 3 Code	AUS
[Ref.: #63249]	Continent	Australia and Oceania

[Ref.: #64778]	Sample type/isolated from	water
[Ref.: #64778]	Country	Australia
[Ref.: #64778]	Country ISO 3 Code	AUS
[Ref.: #64778]	Continent	Australia and Oceania
* marker position based on {}

Isolation sources categories

#Environmental

#Aquatic

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence LK023503 (>99% sequence identity) for Burkholderia from Microbeatlas

Aquatic Samples	564
Soil Samples	1055
Animal Samples	1930
Plant Samples	1505
Total Samples	5054

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #64778]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #64778]	Burkholderia territorii partial 16S rRNA gene, type strain LMG 28158T	LK023503	1443	ENA	1503055 tax ID

Genome sequence information:

Only first 5 entries are displayed. Click here to see all.

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Burkholderia territorii strain LMG 28158	1503055.47	wgs	PATRIC	1503055 tax ID	*
[Ref.: #66792]	Burkholderia territorii LMG 28158	GCA_902499035	contig	GenBank	1503055 tax ID	*
[Ref.: #66792]	Burkholderia territorii CCUG 65687	GCA_008802115	contig	GenBank	1503055 tax ID	*
[Ref.: #66792]	Burkholderia territorii DSM 107636	GCA_016836745	contig	GenBank	1503055 tax ID	*
[Ref.: #66792]	Burkholderia territorii strain CCUG 65687	1503055.39	wgs	PATRIC	1503055 tax ID	*
[Ref.: #66792]	Burkholderia territorii strain DSM 107636	1503055.48	wgs	PATRIC	1503055 tax ID	*

[Ref.: #64778]

GC-content

67 mol%

high performance liquid chromatography (HPLC)

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Burkholderia territorii strain CCUG 65687 PATRIC: 1503055.39
[Ref.: #69480]	motile	yes	90.043	no
[Ref.: #69480]	gram-positive	no	98.243	no
[Ref.: #69480]	anaerobic	no	98.989	yes
[Ref.: #69480]	aerobic	yes	91.3	no
[Ref.: #69480]	halophile	no	94.033	no
[Ref.: #69480]	spore-forming	no	95.444	no
[Ref.: #69480]	thermophile	no	99.432	yes
[Ref.: #69480]	glucose-util	yes	92.239	no
[Ref.: #69480]	flagellated	no	81.91	no
[Ref.: #69480]	glucose-ferment	no	85.676	no

Availability in culture collections External links

[Ref.: #64778]

Culture collection no.

CCUG 65687, LMG 28158, DSM 107636, CCUG 6568

[Ref.: #109999]

SI-ID 392198

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Burkholderia stagnalis sp. nov. and Burkholderia territorii sp. nov., two novel Burkholderia cepacia complex species from environmental and human sources.	De Smet B, Mayo M, Peeters C, Zlosnik JEA, Spilker T, Hird TJ, LiPuma JJ, Kidd TJ, Kaestli M, Ginther JL, Wagner DM, Keim P, Bell SC, Jacobs JA, Currie BJ, Vandamme P	Int J Syst Evol Microbiol	10.1099/ijs.0.000251	2015	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#63249 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 65687

#64778

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 107636

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#109999

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID392198.1 )

* These data were automatically processed and therefore are not curated

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Burkholderia territorii strain CCUG 65687

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