Name: Olleya marilimosa DSM 25196
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 5726

Type strain:

Species: Olleya marilimosa

Culture col. no.: DSM 25196, ACAM 1065, CIP 108537, CAM 030

Strain history: CIP <- 2004, J. P. Bowman, Tasmania, Australia: strain CAM030

NCBI tax ID(s): 1353276 (strain), 272164 (species)

SI-ID 265405

CIP 108537

Section

Olleya marilimosa DSM 25196 is an aerobe, mesophilic, Gram-negative bacterium that was isolated from marine aggregates.

Gram-negative
motile
rod-shaped
aerobe
mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacteroidota*
	Class	*Flavobacteriia*
	Order	*Flavobacteriales*
	Family	*Flavobacteriaceae*
	Genus	*Olleya*
	Species	**Olleya marilimosa**
	Full Scientific Name (LPSN)	Olleya marilimosa Mancuso Nichols et al. 2005

Information on morphological and physiological properties Morphology

[Ref.: #31479]	Gram stain	negative
[Ref.: #120792]	Gram stain	negative

[Ref.: #31479]	Cell length	2.25 µm

[Ref.: #31479]	Cell width	0.4 µm

[Ref.: #31479]	Cell shape	rod-shaped
[Ref.: #120792]	Cell shape	rod-shaped

[Ref.: #31479]	Motility	yes
[Ref.: #120792]	Motility	no

[Ref.: #31479]	Flagellum arrangement	gliding

[Ref.: #31479]

Pigment production

yes

Information on culture and growth conditions Culture and growth conditions

[Ref.: #17935]

Culture medium

BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)

[Ref.: #17935]

Culture medium growth

[Ref.: #17935]

Culture medium link

Medium recipe at MediaDive

[Ref.: #17935]

Culture medium composition

expand / minimize

[Ref.: #38281]

Culture medium

Marine agar (MA)

[Ref.: #38281]

Culture medium growth

[Ref.: #38281]

Culture medium composition

expand / minimize

[Ref.: #120792]

Culture medium

CIP Medium 13

[Ref.: #120792]

Culture medium growth

[Ref.: #120792]

Culture medium link

Medium recipe provided by DSMZ

	Kind of temperature		Temperature
[Ref.: #17935]		growth	25 °C
[Ref.: #31479]		growth	04-30 °C
[Ref.: #31479]		optimum	17 °C
[Ref.: #38281]		growth	20 °C
[Ref.: #120792]		growth	5-30 °C
[Ref.: #120792]	no	growth	37 °C

[Ref.: #17935]	Temperature range	mesophilic
[Ref.: #31479]	Temperature range	psychrophilic
[Ref.: #38281]	Temperature range	psychrophilic
[Ref.: #120792]	Temperature range	mesophilic

	pH	Kind of pH		pH
[Ref.: #31479]			optimum	7
[Ref.: #31479]			growth	05-09

Information on physiology and metabolism Physiology and metabolism

[Ref.: #31479]

Oxygen tolerance

aerobe

[Ref.: #31479]

Ability of spore formation

	Salt	Tested relation		Salt conc.
[Ref.: #31479]	NaCl		growth	0.2-0.9	%
[Ref.: #31479]	NaCl		optimum	0.35	%
[Ref.: #120792]	NaCl		growth	2-4	%
[Ref.: #120792]	NaCl	no	growth	0	%
[Ref.: #120792]	NaCl	no	growth	6	%
[Ref.: #120792]	NaCl	no	growth	8	%
[Ref.: #120792]	NaCl	no	growth	10	%

[Ref.: #31479]

Observation

aggregates in clumps

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #31479]	citrate ChEBI	+	carbon source
[Ref.: #120792]	citrate ChEBI	-	carbon source
[Ref.: #120792]	esculin ChEBI	+	hydrolysis
[Ref.: #31479]	gelatin ChEBI	+	carbon source
[Ref.: #31479]	glucose ChEBI	+	carbon source
[Ref.: #31479]	maltose ChEBI	+	carbon source
[Ref.: #31479]	mannose ChEBI	+	carbon source
[Ref.: #120792]	nitrate ChEBI	-	reduction
[Ref.: #120792]	nitrite ChEBI	-	reduction
[Ref.: #31479]	tween 80 ChEBI	+	carbon source

	Metabolite production	Metabolite	Production
[Ref.: #120792]		indole ChEBI	no

	Physiological tests	Metabolite	Voges-Proskauer-test	Methylred-test
[Ref.: #120792]		acetoin ChEBI	-
[Ref.: #120792]		glucose ChEBI		-

	Enzyme	Enzyme activity	EC number
[Ref.: #68382]	acid phosphatase	+	3.1.3.2	* from API zym
[Ref.: #120792]	alcohol dehydrogenase	-	1.1.1.1
[Ref.: #31479]	alkaline phosphatase	+	3.1.3.1
[Ref.: #68382]	alkaline phosphatase	+	3.1.3.1	* from API zym
[Ref.: #68382]	alpha-chymotrypsin	-	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #68382]	alpha-galactosidase	-	3.2.1.22	* from API zym
[Ref.: #68382]	alpha-glucosidase	-	3.2.1.20	* from API zym
[Ref.: #68382]	alpha-mannosidase	-	3.2.1.24	* from API zym
[Ref.: #120792]	amylase	-
[Ref.: #120792]	beta-galactosidase	-	3.2.1.23
[Ref.: #68382]	beta-galactosidase	-	3.2.1.23	* from API zym
[Ref.: #68382]	beta-glucosidase	-	3.2.1.21	* from API zym
[Ref.: #68382]	beta-glucuronidase	-	3.2.1.31	* from API zym
[Ref.: #120792]	caseinase	+	3.4.21.50
[Ref.: #31479]	catalase	+	1.11.1.6
[Ref.: #120792]	catalase	+	1.11.1.6
[Ref.: #68382]	cystine arylamidase	+	3.4.11.3	* from API zym
[Ref.: #31479]	cytochrome oxidase	+	1.9.3.1
[Ref.: #68382]	esterase (C 4)	-		* from API zym
[Ref.: #68382]	esterase lipase (C 8)	+		* from API zym
[Ref.: #120792]	gamma-glutamyltransferase	+	2.3.2.2
[Ref.: #120792]	gelatinase	+
[Ref.: #120792]	lecithinase	+
[Ref.: #68382]	leucine arylamidase	+	3.4.11.1	* from API zym
[Ref.: #120792]	lipase	-
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #120792]	lysine decarboxylase	-	4.1.1.18
[Ref.: #68382]	N-acetyl-beta-glucosaminidase	-	3.2.1.52	* from API zym
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	+		* from API zym
[Ref.: #120792]	ornithine decarboxylase	-	4.1.1.17
[Ref.: #120792]	oxidase	-
[Ref.: #120792]	phenylalanine ammonia-lyase	-	4.3.1.24
[Ref.: #120792]	protease	+
[Ref.: #68382]	trypsin	-	3.4.21.4	* from API zym
[Ref.: #120792]	tryptophan deaminase	-
[Ref.: #120792]	tween esterase	+
[Ref.: #120792]	urease	+/-	3.5.1.5
[Ref.: #68382]	valine arylamidase	+		* from API zym
	Only first 10 entries are displayed. Click here to see all.

API® Biotype100:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	ControlQ	D-glucose as carbon sourceGLU	D-fructose as carbon sourceFRU	D-galactose as carbon sourceGAL	D-trehalose as carbon sourceTRE	D-mannose as carbon sourceMNE	L-sorbose as carbon sourceSBE	D-melibiose as carbon sourceMEL	sucrose as carbon sourceSAC	D-raffinose as carbon sourceRAF	maltotriose as carbon sourceMTE	maltose as carbon sourceMAL	lactose as carbon sourceLAC	lactulose as carbon sourceLTE	1-O-methyl-beta-galactopyranoside as carbon sourceMbGa	1-O-methyl-alpha-galactopyranoside as carbon sourceMaGa	D-cellobiose as carbon sourceCEL	gentiobiose as carbon sourceGEN	1-O-methyl-beta-D-glucopyranoside as carbon sourceMbGu	esculin as carbon sourceESC	D-ribose as carbon sourceRIB	L-arabinose as carbon sourceARA	D-xylose as carbon sourceXYL	palatinose as carbon sourcePLE	L-rhamnose as carbon sourceRHA	L-fucose as carbon sourceFUC	D-melezitose as carbon sourceMLZ	D-arabitol as carbon sourceDARL	L-arabitol as carbon sourceLARL	xylitol as carbon sourceXLT	dulcitol as carbon sourceDUL	D-tagatose as carbon sourceTAG	glycerol as carbon sourceGLY	myo-inositol as carbon sourceINO	D-mannitol as carbon sourceMAN	maltitol as carbon sourceMTL	D-turanose as carbon sourceTUR	D-sorbitol as carbon sourceSOR	adonitol as carbon sourceADO	hydroxyquinoline-beta-glucuronide as carbon sourceHBG	D-lyxose as carbon sourceLYX	i-erythritol as carbon sourceERY	1-O-methyl-alpha-D-glucoside as carbon sourceMDG	3-O-methyl-D-glucose as carbon source3MDG	D-saccharate as carbon sourceSAT	mucate as carbon sourceMUC	L-tartrate as carbon sourceLTAT	D-tartrate as carbon sourceDTAT	meso-tartrate as carbon sourceMTAT	D-malate as carbon sourceDMLT	L-malate as carbon sourceLMLT	cis-aconitate as carbon sourceCATE	trans-aconitate as carbon sourceTATE	tricarballylate as carbon sourceTTE	citrate as carbon sourceCIT	D-glucuronate as carbon sourceGRT	D-galacturonate as carbon sourceGAT	2-ketogluconate as carbon source2KG	5-ketogluconate as carbon source5KG	tryptophan as carbon sourceTRY	N-acetyl-D-glucosamine as carbon sourceNAG	D-gluconate as carbon sourceGNT	phenylacetate as carbon sourcePAC	protocatechuate as carbon sourcePAT	4-hydroxybenzoate as carbon sourcepOBE	quinate as carbon sourceQAT	gentisate as carbon sourceGTE	3-hydroxybenzoate as carbon sourcemOBE	benzoate as carbon sourceBAT	3-phenylpropionate as carbon sourcePPAT	m-coumarate as carbon sourceCMT	trigonelline as carbon sourceTGE	betaine as carbon sourceBET	putrescine as carbon sourcePCE	4-aminobutyrate as carbon sourceABT	histamine as carbon sourceHIN	DL-lactate as carbon sourceLAT	caprate as carbon sourceCAP	caprylate as carbon sourceCYT	L-histidine as carbon sourceHIS	succinate as carbon sourceSUC	fumarate as carbon sourceFUM	glutarate as carbon sourceGRE	DL-glycerate as carbon sourceGYT	5-aminovalerate as carbon sourceAVT	ethanolamine as carbon sourceETN	tryptamine as carbon sourceTTN	D-glucosamine as carbon sourceGLN	itaconate as carbon sourceITA	3-hydroxybutyrate as carbon source3OBU	L-aspartate as carbon sourceAPT	L-glutamate as carbon sourceGTT	L-proline as carbon sourcePRO	D-alanine as carbon sourceDALA	L-alanine as carbon sourceLALA	L-serine as carbon sourceSER	malonate as carbon sourceMNT	propionate as carbon sourcePROP	L-tyrosine as carbon sourceTYR	2-ketoglutarate as carbon source2KT
[Ref.: #120792]	2792	not determinedn.d.	+	-	-	-	+	-	-	-	-	+	+	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	+	-	-	-	-	-	-	-	-

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #120792]	11265	-	+	-	+	-	+	+	+	-	-	+	+	-	-	-	-	-	-	-	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #17935]	Sample type/isolated from	marine aggregates
[Ref.: #17935]	Geographic location (country and/or sea, region)	Southern Ocean
[Ref.: #17935]	Country	Antarctica
[Ref.: #17935]	Country ISO 3 Code	ATA
[Ref.: #17935]	Continent	Australia and Oceania
[Ref.: #17935]	Geographic location	-65.5350°/143.1710°

[Ref.: #120792]	Sample type/isolated from	Environment, Seawater particulates, water temperature 5°C
[Ref.: #120792]	Country	Antarctic Ocean
[Ref.: #120792]	Isolation date	2001
* marker position based on {}

Isolation sources categories

#Environmental

#Aquatic

#Marine

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence JN175350 (>99% sequence identity) for Olleya from Microbeatlas

Aquatic Samples	889
Soil Samples	25
Animal Samples	57
Plant Samples	5
Total Samples	976

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #17935]	Biosafety level	1	Risk group (German classification) According to TRBA 466
[Ref.: #120792]	Biosafety level	1	Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #17935]	Olleya marilimosa strain CAM030 16S ribosomal RNA gene, partial sequence	AY586527	1249	ENA	1353276 tax ID
[Ref.: #20218]	Olleya marilimosa strain CIP 108537 16S ribosomal RNA gene, complete sequence	JN175350	1490	ENA	1353276 tax ID	*

[Ref.: #17935]

GC-content

49 mol%

Availability in culture collections External links

[Ref.: #17935]

Culture collection no.

DSM 25196, ACAM 1065, CIP 108537, CAM 030

[Ref.: #75206]

SI-ID 265405

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Olleya namhaensis sp. nov., isolated from wood falls, and emended description of the genus Olleya Mancuso Nichols et al. 2005 emend. Lee et al. 2010.	Lee MH, Jung YT, Park S, Yoon JH	Int J Syst Evol Microbiol	10.1099/ijs.0.044131-0	2012	*
Phylogeny	Description of Olleya aquimaris sp. nov., isolated from seawater, and emended description of the genus Olleya Mancuso Nichols et al. 2005.	Lee SY, Park S, Oh TK, Yoon JH	Int J Syst Evol Microbiol	10.1099/ijs.0.014563-0	2009	*
Phylogeny	Olleya marilimosa gen. nov., sp. nov., an exopolysaccharide-producing marine bacterium from the family Flavobacteriaceae, isolated from the Southern Ocean.	Nichols CM, Bowman JP, Guezennec J	Int J Syst Evol Microbiol	10.1099/ijs.0.63642-0	2005	*

References

#17935

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 25196

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#31479

Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #27777 (see below)

#38281 ; Curators of the CIP;

#68382

Automatically annotated from API zym .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#75206

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID265405.1 )

#120792 Collection of Institut Pasteur ; Curators of the CIP; CIP 108537

#27777

IJSEM 1557 2005 ( DOI 10.1099/ijs.0.63642-0 , PubMed 16014481 )

* These data were automatically processed and therefore are not curated

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