Name: Natrinema versiforme XF10
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 5892

Type strain:

Species: Natrinema versiforme

Strain Designation: XF10

Culture col. no.: DSM 16034, ANMR 0149, AS 1.2365, JCM 10478, CGMCC 1.2365

Strain history: P. Zhou XF10.

NCBI tax ID(s): 1227496 (strain), 88724 (species)

SI-ID 100801

AS 1.2365, JCM 10478, DSM 16034, CGMCC 1.2365

Section

Natrinema versiforme XF10 is a mesophilic archaeon that was isolated from Aibi salt lake.

mesophilic
16S sequence
Archaea
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Archaea"
	Phylum	*Methanobacteriota*
	Class	*Halobacteria*
	Order	*Natrialbales*
	Family	*Natrialbaceae*
	Genus	*Natrinema*
	Species	**Natrinema versiforme**
	Full Scientific Name (LPSN)	Natrinema versiforme Xin et al. 2000

Information on culture and growth conditions Culture and growth conditions

[Ref.: #6169]

Culture medium

HALOBACTERIA MEDIUM (DSMZ Medium 372)

[Ref.: #6169]

Culture medium growth

[Ref.: #6169]

Culture medium link

Medium recipe at MediaDive

[Ref.: #6169]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #6169]			growth	37 °C
[Ref.: #67770]			growth	37 °C

[Ref.: #6169]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #6169]	Sample type/isolated from	Aibi salt lake
[Ref.: #6169]	Geographic location (country and/or sea, region)	Xinjiang
[Ref.: #6169]	Country	China
[Ref.: #6169]	Country ISO 3 Code	CHN
[Ref.: #6169]	Continent	Asia

[Ref.: #67770]	Sample type/isolated from	Aibi salt lake
[Ref.: #67770]	Geographic location (country and/or sea, region)	Xinjiang
[Ref.: #67770]	Country	China
[Ref.: #67770]	Country ISO 3 Code	CHN
[Ref.: #67770]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Environmental	#Aquatic	#Lake (large)
#Condition	#Saline	-

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AB023426 (>99% sequence identity) for Natrinema versiforme from Microbeatlas

Aquatic Samples	1
Soil Samples
Animal Samples
Plant Samples
Total Samples	1

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #6169]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #6169]	Natrinema versiforme gene for 16S ribosomal RNA, partial sequence	AB023426	1438	ENA	88724 tax ID
[Ref.: #20218]	Natrinema versiforme gene for 16S rRNA, complete sequence, strain: JCM 10478	AB663465	1474	ENA	88724 tax ID	*

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Natrinema versiforme JCM 10478	GCA_000337195	contig	GenBank	1227496 tax ID
[Ref.: #66792]	Natrinema versiforme JCM 10478	2554235502	draft	JGI IMG/M	1227496 tax ID	*
[Ref.: #66792]	Natrinema versiforme JCM 10478	1227496.3	wgs	PATRIC	1227496 tax ID	*

[Ref.: #67770]

GC-content

64.2 mol%

high performance liquid chromatography (HPLC)

Availability in culture collections External links

[Ref.: #6169]

Culture collection no.

DSM 16034, ANMR 0149, AS 1.2365, JCM 10478, CGMCC 1.2365

[Ref.: #75373]

SI-ID 100801

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Natrinema ejinorense sp. nov., isolated from a saline lake in Inner Mongolia, China.	Castillo AM, Gutierrez MC, Kamekura M, Xue Y, Ma Y, Cowan DA, Jones BE, Grant WD, Ventosa A	Int J Syst Evol Microbiol	10.1099/ijs.0.64421-0	2006	*
Phylogeny	Natrinema versiforme sp. nov., an extremely halophilic archaeon from Aibi salt lake, Xinjiang, China.	Xin H, Itoh T, Zhou P, Suzuki K, Kamekura M, Nakase T	Int J Syst Evol Microbiol	10.1099/00207713-50-3-1297	2000	*

References

#6169

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 16034

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#75373

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID100801.1 )

* These data were automatically processed and therefore are not curated

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