Mycobacterium cookii NZ2 | Type strain | DSM 43922, ATCC 49103

Strain identifier

BacDive ID: 8423

Type strain:

Species: Mycobacterium cookii

Strain Designation: NZ2

Section

Name and taxonomic classification
Culture and growth conditions
Isolation, sampling and environmental information
Application and interaction
Molecular biology
Strain availability

External links

Information on the name and the taxonomic classification.Name and taxonomic classification

[Ref.: #11271]	Domain	Bacteria
[Ref.: #11271]	Phylum	Actinobacteria
[Ref.: #11271]	Class	Actinobacteria
[Ref.: #11271]	Order	Actinomycetales
[Ref.: #11271]	Family	Mycobacteriaceae
[Ref.: #11271]	Genus	Mycobacterium
[Ref.: #11271]	Species	Mycobacterium cookii
[Ref.: #11271]	Full Scientific Name	Mycobacterium cookii Kazda et al. 1990
[Ref.: #11271]	Strain Designation	NZ2
[Ref.: #11271]	Type strain

		Prokaryotic Nomenclature Up-to-date (PNU)	Taxonomical status	Literature reference
[Ref.: #20215]	Domain	Bacteria
[Ref.: #20215]	Phylum	Actinobacteria
[Ref.: #20215]	Class	Actinobacteria		Int. J. Syst. Bacteriol. 47:483*
[Ref.: #20215]	Family	Mycobacteriaceae		Int. J. Syst. Bacteriol. 30:236
[Ref.: #20215]	Genus	Mycobacterium	genus (AL)	Int. J. Syst. Bacteriol. 30:324 (AL)
[Ref.: #20215]	Species	Mycobacterium cookii	sp. nov. (VP)	Int. J. Syst. Bacteriol. 40:220*
[Ref.: #20215]	Full Scientific Name	Mycobacterium cookii Kazda et al. 1990

Information on culture and growth conditionsCulture and growth conditions

[Ref.: #11271]

Culture medium

LÖWENSTEIN-JENSEN MEDIUM (DSMZ Medium 354), 28°C

[Ref.: #11271]

Culture medium growth

[Ref.: #11271]

Culture medium link

medium recipe provided by DSMZ

[Ref.: #36374]

Culture medium

MEDIUM 55 - for Mycobacterium

[Ref.: #36374]

Culture medium growth

	Temperatures	Kind of temperature		Temperature
[Ref.: #11271]			growth	28 ̊C
[Ref.: #36374]			growth	30 ̊C

[Ref.: #11271]

Temperature range

mesophilic

Information on isolation source, the sampling and environmental conditionsIsolation, sampling and environmental information

[Ref.: #11271]

Sample type/isolated from

Sphagnum moss

[Ref.: #11271]

Country

New Zealand

[Ref.: #11271]

Continent

Australia and Oceania

Isolation sources categories

#Host-associates

#Plants

#Peat moss

What are isolation sources categories?

* marker position based on {}

Information on possible application of the strain and its possible interaction with e.g. potential hostsApplication and interaction

[Ref.: #11271]

Biosafety level

Risk group (German classification)

Information on genomic background e.g. entries in nucleic sequence databassMolecular biology

Sequence information:

Only first 5 entries are displayed. Click here to see all.

	Sequence database	Sequence accession description	Sequence accession number	Sequence length (bp)	Associated NCBI tax ID
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Mycobacterium cookii 16S ribosomal RNA gene, partial sequence	AF480598	1471	1775	*
[Ref.: #20218]	Marker Gene (EMBL Direct submission)	Mycobacterium cookii partial 16S rRNA	X53896	1459	1775	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Mycobacterium cookii strain CIP 105396 65 kDa heat shock protein (hsp65) gene, partial cds	AF547824	424	1775	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Mycobacterium cookii strain CIP 105396 16S ribosomal RNA gene, partial sequence	AF547915	556	1775	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Mycobacterium cookii strain CIP 105396 superoxide dismutase (sod) gene, partial cds	AY544815	415	1775	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Mycobacterium cookii strain CIP 105396 RNA polymerase (rpoB) gene, partial cds	AY544904	398	1775	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Mycobacterium cookii strain CIP 105396 tmRNA (ssrA) gene, partial sequence	DQ480302	306	1775	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Mycobacterium cookii strain CIP 105396 elongation factor Tu (tuf) gene, partial cds	DQ986067	649	1775	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Mycobacterium cookii strain CIP 105396 SmpB (smpB) gene, partial cds	EF686770	312	1775	*

Availability in culture collectionsStrain availability

[Ref.: #11271]

Culture collection no.

DSM 43922, ATCC 49103

[Ref.: #11271]

Strain history

<- A. F. Yassin <- ATCC <- J. Kazda, NZ2

[Ref.: #20218]

Associated Passport(s) in StrainInfo

139248, 113771

References

#11271

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 43922

#20215

Leibniz Institute DSMZ D.Gleim, M.Kracht, N.Weiss et. al.: Prokaryotic Nomenclature Up-to-date - compilation of all names of Bacteria and Archaea, validly published according to the Bacteriological Code since 1. Jan. 1980, and validly published nomenclatural changes since .

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#36374 ; Curators of the CIP;
* These References are textmined

Search for species Mycobacterium cookii in external resources:
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BRENDA
PANGAEA
StrainInfo
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