Flavobacterium xanthum 5-O-C | Type strain | DSM 3661, ACAM 81, IAM 12026, NCMB 2069

Strain identifier

BacDive ID: 5542

Type strain:

Species: Flavobacterium xanthum

Strain Designation: 5-O-C

Culture col. no.: DSM 3661, ACAM 81, IAM 12026, NCMB 2069

Section

Name and taxonomic classification
Culture and growth conditions
Isolation, sampling and environmental information
Application and interaction
Molecular biology
Strain availability

External links

Information on the name and the taxonomic classification.Name and taxonomic classification

[Ref.: #1445]	Domain	Bacteria
[Ref.: #1445]	Phylum	Bacteroidetes
[Ref.: #1445]	Class	Flavobacteriia
[Ref.: #1445]	Order	Flavobacteriales
[Ref.: #1445]	Family	Flavobacteriaceae
[Ref.: #1445]	Genus	Flavobacterium
[Ref.: #1445]	Species	Flavobacterium xanthum
[Ref.: #1445]	Full Scientific Name	Flavobacterium xanthum (ex Inoue and Komagata 1976) McCammon and Bowman 2000
[Ref.: #1445]	Strain Designation	5-O-C
[Ref.: #1445]	Type strain

		Prokaryotic Nomenclature Up-to-date (PNU)	Taxonomical status	Literature reference
[Ref.: #20215]	Domain	Bacteria
[Ref.: #20215]	Phylum	Bacteroidetes
[Ref.: #20215]	Class	Flavobacteriia		Int. J. Syst. Evol. Microbiol. 62:1017
[Ref.: #20215]	Family	Flavobacteriaceae
[Ref.: #20215]	Genus	Flavobacterium	genus (AL)	Int. J. Syst. Bacteriol. 30:299 (AL)
[Ref.: #20215]	Species	Flavobacterium xanthum	sp. nov., nom. rev. (VP)	Int. J. Syst. Evol. Microbiol. 50:1060*
[Ref.: #20215]	Full Scientific Name	Flavobacterium xanthum (ex Inoue and Komagata 1976) McCammon and Bowman 2000

Information on culture and growth conditionsCulture and growth conditions

[Ref.: #1445]

Culture medium

CY-AGAR (DSMZ Medium 67), 15°C

[Ref.: #1445]

Culture medium growth

[Ref.: #1445]

Culture medium link

medium recipe provided by DSMZ

[Ref.: #34273]

Culture medium

MEDIUM 13 - Marine agar

[Ref.: #34273]

Culture medium growth

[Ref.: #34273]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #1445]			growth	10-20 ̊C
[Ref.: #34273]			growth	20 ̊C

[Ref.: #1445]

Temperature range

psychrophilic

Information on isolation source, the sampling and environmental conditionsIsolation, sampling and environmental information

[Ref.: #1445]

Sample type/isolated from

soil

[Ref.: #1445]

Continent

Australia and Oceania

Isolation sources categories

#Environmental

#Terrestrial

#Soil

What are isolation sources categories?

* marker position based on {}

Information on possible application of the strain and its possible interaction with e.g. potential hostsApplication and interaction

[Ref.: #1445]

Biosafety level

Risk group (German classification)

Information on genomic background e.g. entries in nucleic sequence databassMolecular biology

Sequence information:

	Sequence database	Sequence accession description	Sequence accession number	Sequence length (bp)	Associated NCBI tax ID
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Flavobacterium xanthum 16S ribosomal RNA gene, partial sequence	AF030380	1454	69322	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Flavobacterium xanthum O31 16S ribosomal RNA gene, partial sequence	AF312005	472	69322	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Flavobacterium xanthum axD2 16S ribosomal RNA gene, partial sequence	AF312006	459	69322	*
[Ref.: #20218]	EMBL Genome project data	Flavobacterium xanthum partial gyrB gene, strain LMG 8372	FR774032	1185	69322	*
[Ref.: #20218]	Marker Gene (DDBJ Direct submission)	Flavobacterium xanthum gene for 16S rRNA, partial sequence, strain: NBRC 14972	AB680727	1439	69322	*

Availability in culture collectionsStrain availability

[Ref.: #1445]

Culture collection no.

DSM 3661, ACAM 81, IAM 12026, NCMB 2069

[Ref.: #1445]

Strain history

<- H. Reichenbach <- NCMB <- K. Yamasoto <- K. Inoue, 5-O-C (Cytophaga xantha)

[Ref.: #20218]

Associated Passport(s) in StrainInfo

42310, 42309, 42311, 158478

References

#1445

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 3661

#20215

Leibniz Institute DSMZ D.Gleim, M.Kracht, N.Weiss et. al.: Prokaryotic Nomenclature Up-to-date - compilation of all names of Bacteria and Archaea, validly published according to the Bacteriological Code since 1. Jan. 1980, and validly published nomenclatural changes since .

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#34273 ; Curators of the CIP;
* These References are textmined

Search for species Flavobacterium xanthum in external resources:
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