Actinomyces gerencseriae 2-606-032, VPI 12594 | Type strain | DSM 6844, ATCC 23860, CDC W838, CIP 105418, JCM 12963

Strain identifier

BacDive ID: 159

Type strain:

Species: Actinomyces gerencseriae

Strain Designation: 2-606-032, VPI 12594

Culture col. no.: DSM 6844, ATCC 23860, CDC W838, CIP 105418, JCM 12963

Section

Name and taxonomic classification
Morphology and physiology
Culture and growth conditions
Isolation, sampling and environmental information
Application and interaction
Molecular biology
Strain availability

External links

Information on the name and the taxonomic classification.Name and taxonomic classification

[Ref.: #2852]	Domain	Bacteria
[Ref.: #2852]	Phylum	Actinobacteria
[Ref.: #2852]	Class	Actinobacteria
[Ref.: #2852]	Order	Actinomycetales
[Ref.: #2852]	Family	Actinomycetaceae
[Ref.: #2852]	Genus	Actinomyces
[Ref.: #2852]	Species	Actinomyces gerencseriae
[Ref.: #2852]	Full Scientific Name	Actinomyces gerencseriae Johnson et al. 1990
[Ref.: #2852]	Strain Designation	2-606-032, VPI 12594
[Ref.: #2852]	Type strain

		Prokaryotic Nomenclature Up-to-date (PNU)	Taxonomical status	Literature reference
[Ref.: #20215]	Domain	Bacteria
[Ref.: #20215]	Phylum	Actinobacteria
[Ref.: #20215]	Class	Actinobacteria		Int. J. Syst. Bacteriol. 47:483*
[Ref.: #20215]	Family	Actinomycetaceae		Int. J. Syst. Bacteriol. 30:234
[Ref.: #20215]	Genus	Actinomyces	genus (AL)	Int. J. Syst. Bacteriol. 30:243 (AL)
[Ref.: #20215]	Species	Actinomyces gerencseriae	sp. nov. (VP)	Int. J. Syst. Bacteriol. 40:278*
[Ref.: #20215]	Full Scientific Name	Actinomyces gerencseriae Johnson et al. 1990

Information on morphological and physiological propertiesMorphology and physiology

[Ref.: #23355]	Gram stain	positive
[Ref.: #23355]	Motility	no

[Ref.: #23355]	Colony size	0.2 mm
[Ref.: #23355]	Colony color	white
[Ref.: #23355]	Colony shape	circular
[Ref.: #23355]	Incubation period	2 days
[Ref.: #23355]	Cultivation medium used	blood agar and peptone-yeast extract-glucose broth

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #23355]	Arabinose	-	builds acid from
[Ref.: #23355]	D-Arabinose	+	fermentation
[Ref.: #23355]	Fructose	+	builds acid from
[Ref.: #23355]	Mannitol	+	builds acid from
[Ref.: #23355]	Raffinose	+	builds acid from

[Ref.: #2852]	Murein short key	A21.11
[Ref.: #2852]	Murein types	A5ß L-Orn-L-Lys-D-Glu

[Ref.: #2852]	Oxygen tolerance	microaerophile
[Ref.: #23355]	Oxygen tolerance	anaerobe

[Ref.: #23355]

Ability of spore formation

Information on culture and growth conditionsCulture and growth conditions

[Ref.: #2852]

Culture medium

BHI/2 MEDIUM (DSMZ Medium 217), 37°C, microaerobic

[Ref.: #2852]

Culture medium growth

[Ref.: #2852]

Culture medium link

medium recipe provided by DSMZ

[Ref.: #23355]

Culture medium

blood agar

[Ref.: #23355]

Culture medium growth

[Ref.: #41697]

Culture medium

MEDIUM 258 - for Actinomyces gerencseriae

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Culture medium growth

[Ref.: #41697]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #2852]			growth	37 ̊C
[Ref.: #41697]			growth	37 ̊C

[Ref.: #2852]

Temperature range

mesophilic

Information on isolation source, the sampling and environmental conditionsIsolation, sampling and environmental information

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Sample type/isolated from

human, parotid abscess

Isolation sources categories

#Host-associates	#Human	-
#Host Body-Site	#Other	#Abscess
#Host Body-Site	#Organ	#Ear

What are isolation sources categories?

* marker position based on {}

Information on possible application of the strain and its possible interaction with e.g. potential hostsApplication and interaction

[Ref.: #2852]

Biosafety level

Risk group (German classification)

Information on genomic background e.g. entries in nucleic sequence databassMolecular biology

[Ref.: #2852]	GC-content	70.0 mol%	thermal denaturation, midpoint method (Tm)
[Ref.: #23355]	GC-content	70.0 mol%

Sequence information:

Only first 5 entries are displayed. Click here to see all.

	Sequence database	Sequence accession description	Sequence accession number	Sequence length (bp)	Associated NCBI tax ID
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Actinomyces gerencseriae strain ATCC 23860 ATP synthase F1 alpha subunit (atpA) gene, partial cds	EU647585	474	52769	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Actinomyces gerencseriae strain ATCC 23860 citrate synthase I (gltA) gene, partial cds	EU647589	552	52769	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Actinomyces gerencseriae strain ATCC 23860 DNA gyrase A subunit (gyrA) gene, partial cds	EU647591	564	52769	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Actinomyces gerencseriae strain ATCC 23860 glucose-6-phosphate isomerase (pgi) gene, partial cds	EU647597	531	52769	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Actinomyces gerencseriae 16S ribosomal RNA gene, partial sequence	AF058050	282	52769	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Actinomyces gerencseriae DSM 6844 G448DRAFT_scaffold00001.1_C1, whole genome shotgun sequence	AUBN01000001	53666	1120943	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Actinomyces gerencseriae DSM 6844 G448DRAFT_scaffold00001.1_C2, whole genome shotgun sequence	AUBN01000002	453875	1120943	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Actinomyces gerencseriae DSM 6844 G448DRAFT_scaffold00002.2_C, whole genome shotgun sequence	AUBN01000003	348302	1120943	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Actinomyces gerencseriae DSM 6844 G448DRAFT_scaffold00003.3_C1, whole genome shotgun sequence	AUBN01000004	231738	1120943	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Actinomyces gerencseriae DSM 6844 G448DRAFT_scaffold00003.3_C2, whole genome shotgun sequence	AUBN01000005	89192	1120943	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Actinomyces gerencseriae DSM 6844 G448DRAFT_scaffold00004.4_C, whole genome shotgun sequence	AUBN01000006	317986	1120943	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Actinomyces gerencseriae DSM 6844 G448DRAFT_scaffold00005.5_C1, whole genome shotgun sequence	AUBN01000007	109830	1120943	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Actinomyces gerencseriae DSM 6844 G448DRAFT_scaffold00005.5_C2, whole genome shotgun sequence	AUBN01000008	192906	1120943	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Actinomyces gerencseriae DSM 6844 G448DRAFT_scaffold00006.6_C, whole genome shotgun sequence	AUBN01000009	260424	1120943	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Actinomyces gerencseriae DSM 6844 G448DRAFT_scaffold00007.7_C, whole genome shotgun sequence	AUBN01000010	249415	1120943	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Actinomyces gerencseriae DSM 6844 G448DRAFT_scaffold00008.8_C, whole genome shotgun sequence	AUBN01000011	161355	1120943	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Actinomyces gerencseriae DSM 6844 G448DRAFT_scaffold00009.9_C, whole genome shotgun sequence	AUBN01000012	153715	1120943	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Actinomyces gerencseriae DSM 6844 G448DRAFT_scaffold00010.10_C, whole genome shotgun sequence	AUBN01000013	137165	1120943	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Actinomyces gerencseriae DSM 6844 G448DRAFT_scaffold00011.11_C, whole genome shotgun sequence	AUBN01000014	136673	1120943	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Actinomyces gerencseriae DSM 6844 G448DRAFT_scaffold00012.12_C, whole genome shotgun sequence	AUBN01000015	123096	1120943	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Actinomyces gerencseriae DSM 6844 G448DRAFT_scaffold00013.13_C, whole genome shotgun sequence	AUBN01000016	84548	1120943	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Actinomyces gerencseriae DSM 6844 G448DRAFT_scaffold00014.14_C, whole genome shotgun sequence	AUBN01000017	68451	1120943	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Actinomyces gerencseriae DSM 6844 G448DRAFT_scaffold00015.15_C, whole genome shotgun sequence	AUBN01000018	68038	1120943	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Actinomyces gerencseriae DSM 6844 G448DRAFT_scaffold00016.16_C, whole genome shotgun sequence	AUBN01000019	45973	1120943	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Actinomyces gerencseriae DSM 6844 G448DRAFT_scaffold00017.17_C, whole genome shotgun sequence	AUBN01000020	31034	1120943	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Actinomyces gerencseriae DSM 6844 G448DRAFT_scaffold00018.18_C, whole genome shotgun sequence	AUBN01000021	27821	1120943	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Actinomyces gerencseriae DSM 6844 G448DRAFT_scaffold00019.19_C, whole genome shotgun sequence	AUBN01000022	23460	1120943	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Actinomyces gerencseriae DSM 6844 G448DRAFT_scaffold00020.20_C, whole genome shotgun sequence	AUBN01000023	20157	1120943	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Actinomyces gerencseriae DSM 6844 G448DRAFT_scaffold00021.21_C, whole genome shotgun sequence	AUBN01000024	9588	1120943	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Actinomyces gerencseriae DSM 6844 G448DRAFT_scaffold00022.22_C, whole genome shotgun sequence	AUBN01000025	7882	1120943	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Actinomyces gerencseriae DSM 6844 G448DRAFT_scaffold00023.23_C, whole genome shotgun sequence	AUBN01000026	5039	1120943	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Actinomyces gerencseriae DSM 6844 G448DRAFT_scaffold00024.24_C, whole genome shotgun sequence	AUBN01000027	1859	1120943	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Actinomyces gerencseriae DSM 6844 G448DRAFT_scaffold00025.25_C, whole genome shotgun sequence	AUBN01000028	1712	1120943	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Actinomyces gerencseriae DSM 6844 G448DRAFT_scaffold00026.26_C, whole genome shotgun sequence	AUBN01000029	1398	1120943	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Actinomyces gerencseriae DSM 6844 G448DRAFT_scaffold00027.27_C, whole genome shotgun sequence	AUBN01000030	1228	1120943	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Actinomyces gerencseriae DSM 6844 G448DRAFT_scaffold00028.28_C, whole genome shotgun sequence	AUBN01000031	1182	1120943	*
[Ref.: #20218]	Marker Gene (EMBL Direct submission)	A.gerencseriae 16S rDNA	X80414	1415	52769	*
[Ref.: #2852]	INSDC (WGS)	Actinomyces gerencseriae DSM 6844, whole genome shotgun sequencing project	AUBN00000000	31	1120943

Availability in culture collectionsStrain availability

[Ref.: #2852]

Culture collection no.

DSM 6844, ATCC 23860, CDC W838, CIP 105418, JCM 12963

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Strain history

<- ATCC <- L. Georg, CDC W838 <- L.A. Weed, 2-606-032

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Associated Passport(s) in StrainInfo

126878, 103315, 103316, 148301, 534188

References

#2852

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 6844

#20215

Leibniz Institute DSMZ D.Gleim, M.Kracht, N.Weiss et. al.: Prokaryotic Nomenclature Up-to-date - compilation of all names of Bacteria and Archaea, validly published according to the Bacteriological Code since 1. Jan. 1980, and validly published nomenclatural changes since .

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#23355

J. L. Johnson, Lillian V. H. Moore, Beverly Kaneko, W. E. C. Moore: Actinomyces georgiae sp. nov., Actinomyces gerencseriae sp. nov., Designation of Two Genospecies of Actinomyces naeslundii, and Inclusion of A. naeslundii serotypes II and III and Actinomyces viscosus serotype II in A. naeslundii Genospecies 2. IJSEM 40: 273 - 286 1990 ( DOI 10.1099/00207713-40-3-273 )

#41697 ; Curators of the CIP;
* These References are textmined

Search for species Actinomyces gerencseriae in external resources:
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