Streptomyces fradiae | Type strain | DSM 40063, ATCC 10745, ATCC 19760, CBS 498.68, ETH 13363, ETH 13472, ETH 28510, IFO 12773, IMRU 3535, ISP 5063, JCM 4133, JCM 4579, NBRC 12773, NCIB 8233, NRRL B-1195, RIA 1040

Strain identifier

BacDive ID: 15172

Type strain:

Species: Streptomyces fradiae

Culture col. no.: DSM 40063, ATCC 10745, ATCC 19760, CBS 498.68, ETH 13363, ETH 13472, ETH 28510, IFO 12773, IMRU 3535, ISP 5063, JCM 4133, JCM 4579, NBRC 12773, NCIB 8233, NRRL B-1195, RIA 1040

Section

Name and taxonomic classification
Morphology and physiology
Culture and growth conditions
Isolation, sampling and environmental information
Application and interaction
Molecular biology
Strain availability

External links

Information on the name and the taxonomic classification.Name and taxonomic classification

[Ref.: #9264]	Domain	Bacteria
[Ref.: #9264]	Phylum	Actinobacteria
[Ref.: #9264]	Class	Actinobacteria
[Ref.: #9264]	Order	Actinomycetales
[Ref.: #9264]	Family	Streptomycetaceae
[Ref.: #9264]	Genus	Streptomyces
[Ref.: #9264]	Species	Streptomyces fradiae
[Ref.: #9264]	Full Scientific Name	Streptomyces fradiae (Waksman and Curtis 1916) Waksman and Henrici 1948 emend. Lanoot et al. 2004
[Ref.: #9264]	Type strain

		Prokaryotic Nomenclature Up-to-date (PNU)	Taxonomical status	Literature reference
[Ref.: #20215]	Domain	Bacteria
[Ref.: #20215]	Phylum	Actinobacteria
[Ref.: #20215]	Class	Actinobacteria		Int. J. Syst. Bacteriol. 47:483*
[Ref.: #20215]	Family	Streptomycetaceae
[Ref.: #20215]	Genus	Streptomyces	genus (AL)	Int. J. Syst. Bacteriol. 30:368 (AL)
[Ref.: #20215]	Species	Streptomyces fradiae	species (AL)	Int. J. Syst. Bacteriol. 30:382 (AL)
[Ref.: #20215]	Full Scientific Name	Streptomyces fradiae (Waksman and Curtis 1916) Waksman and Henrici 1948 emend. Lanoot et al. 2004

[Ref.: #20215]

Synonym

Streptomyces roseoflavus

Information on morphological and physiological propertiesMorphology and physiology

[Ref.: #9264]	Name of produced compound	fradicin
[Ref.: #9264]	Name of produced compound	neomycin
[Ref.: #20216]	Name of produced compound	Fradicidin
[Ref.: #20216]	Name of produced compound	Neomycin

Information on culture and growth conditionsCulture and growth conditions

[Ref.: #9264]

Culture medium

GYM STREPTOMYCES MEDIUM (DSMZ Medium 65), 28°C

[Ref.: #9264]

Culture medium growth

[Ref.: #9264]

Culture medium link

medium recipe provided by DSMZ

	Temperatures	Kind of temperature		Temperature
[Ref.: #9264]			growth	28 ̊C

[Ref.: #9264]

Temperature range

mesophilic

Information on isolation source, the sampling and environmental conditionsIsolation, sampling and environmental information

[Ref.: #9264]

Sample type/isolated from

soil

Isolation sources categories

#Environmental

#Terrestrial

#Soil

What are isolation sources categories?

* marker position based on {}

Information on possible application of the strain and its possible interaction with e.g. potential hostsApplication and interaction

[Ref.: #9264]

Biosafety level

Risk group (German classification)

Information on genomic background e.g. entries in nucleic sequence databassMolecular biology

Sequence information:

Only first 5 entries are displayed. Click here to see all.

	Sequence database	Sequence accession description	Sequence accession number	Sequence length (bp)	Associated NCBI tax ID
[Ref.: #20218]	Marker Gene (EMBL Direct submission)	Streptomyces fradiae putative neomycin biosynthetic gene cluster, strain ATCC 10745	AJ786317	42149	1906	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Streptomyces fradiae strain ATCC 10745 RNA polymerase (rpoB) gene, partial cds	AY280750	306	1906	*
[Ref.: #20218]	INSDC Sequence	S.fradiae aminoglycoside phosphotransferase (aph) gene	K00432	1280	1906	*
[Ref.: #20218]	Marker Gene (EMBL Direct submission)	Streptomyces fradiae neomycin biosynthesis gene cluster, strain DSM 40063	AJ629247	50466	1906	*
[Ref.: #20218]	INSDC Sequence	Streptomyces fradiae blaF gene, 5' end	M94255	650	1906	*
[Ref.: #20218]	Marker Gene (DDBJ Direct submission)	Streptomyces fradiae nmcS gene for L-glutamine:2-deoxy-scyllo-inosose aminotransferase, partial cds, strain:IFO12773	AB066368	473	1906	*
[Ref.: #20218]	Marker Gene (DDBJ Direct submission)	Streptomyces fradiae gene for 16S ribosomal RNA, partial sequence, strain: JCM 4579	D44246	121	1906	*
[Ref.: #20218]	Marker Gene (DDBJ Direct submission)	Streptomyces fradiae gene for 16S rRNA, partial sequence, strain: NBRC 12174	AB184059	1470	1906	*
[Ref.: #20218]	Marker Gene (DDBJ Direct submission)	Streptomyces fradiae gene for 16S rRNA, partial sequence, strain: NBRC 12773	AB184134	1463	1906	*
[Ref.: #20218]	Marker Gene (DDBJ Direct submission)	Streptomyces fradiae orf6, neoU, neoT, neoS, neoR, neoA, neoB, neoC, neoD, neoE, neoF, neoG, neoH, neoI, neoJ, neoK, neoL, neoM, neoN, neoO, neoP, neoQ, orf1, orf2, orf3, orf4, orf5 genes, complete and partial cds	AB211959	39237	1906	*
[Ref.: #20218]	Marker Gene (DDBJ Direct submission)	Streptomyces fradiae gene for 16S rRNA, partial sequence, strain: NBRC 3439	AB184776	1467	1906	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Streptomyces fradiae strain NRRL B-1195 16S ribosomal RNA gene, partial sequence	DQ026630	1485	1906	*

Availability in culture collectionsStrain availability

[Ref.: #9264]

Culture collection no.

DSM 40063, ATCC 10745, ATCC 19760, CBS 498.68, ETH 13363, ETH 13472, ETH 28510, IFO 12773, IMRU 3535, ISP 5063, JCM 4133, JCM 4579, NBRC 12773, NCIB 8233, NRRL B-1195, RIA 1040

[Ref.: #9264]

Strain history

<- E.B. Shirling, ISP <- S.A. Waksman, IMRU

[Ref.: #20218]

Associated Passport(s) in StrainInfo

55932, 55927, 55928, 837866, 164633, 95441, 164634, 55935, 164632, 55940, 55941, 55942, 334130, 95442, 55948, 95445

References

#9264

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 40063

#20215

Leibniz Institute DSMZ D.Gleim, M.Kracht, N.Weiss et. al.: Prokaryotic Nomenclature Up-to-date - compilation of all names of Bacteria and Archaea, validly published according to the Bacteriological Code since 1. Jan. 1980, and validly published nomenclatural changes since .

#20216

Leibniz-Institut für Naturstoff-Forschung und Infektionsbiologie e. V. Hans-Knöll-Institut (HKI) Curators of the HKI: Collection Description Leibniz-Institut für Naturstoff-Forschung und Infektionsbiologie e. V. Hans-Knöll-Institut (HKI) .

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

* These References are textmined

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