Streptomyces fimbriatus | Type strain | DSM 40942, ATCC 15051, CBS 453.65, NRRL B-3175

Strain identifier

BacDive ID: 15142

Type strain:

Species: Streptomyces fimbriatus

Culture col. no.: DSM 40942, ATCC 15051, CBS 453.65, NRRL B-3175

Section

Name and taxonomic classification
Morphology and physiology
Culture and growth conditions
Isolation, sampling and environmental information
Application and interaction
Molecular biology
Strain availability

External links

Information on the name and the taxonomic classification.Name and taxonomic classification

[Ref.: #9905]	Domain	Bacteria
[Ref.: #9905]	Phylum	Actinobacteria
[Ref.: #9905]	Class	Actinobacteria
[Ref.: #9905]	Order	Actinomycetales
[Ref.: #9905]	Family	Streptomycetaceae
[Ref.: #9905]	Genus	Streptomyces
[Ref.: #9905]	Species	Streptomyces fimbriatus
[Ref.: #9905]	Full Scientific Name	Streptomyces fimbriatus (Millard and Burr 1926) Waksman and Lechevalier 1953
[Ref.: #9905]	Type strain

		Prokaryotic Nomenclature Up-to-date (PNU)	Taxonomical status	Literature reference
[Ref.: #20215]	Domain	Bacteria
[Ref.: #20215]	Phylum	Actinobacteria
[Ref.: #20215]	Class	Actinobacteria		Int. J. Syst. Bacteriol. 47:483*
[Ref.: #20215]	Family	Streptomycetaceae
[Ref.: #20215]	Genus	Streptomyces	genus (AL)	Int. J. Syst. Bacteriol. 30:368 (AL)
[Ref.: #20215]	Species	Streptomyces fimbriatus	species (AL)	Int. J. Syst. Bacteriol. 30:381 (AL)
[Ref.: #20215]	Full Scientific Name	Streptomyces fimbriatus (Millard and Burr 1926) Waksman and Lechevalier 1953

Information on morphological and physiological propertiesMorphology and physiology

[Ref.: #19494]	Colony color	Yellow
[Ref.: #19494]	Incubation period	10-14 days
[Ref.: #19494]	Cultivation medium used	ISP 2

[Ref.: #19494]	Colony color	Yellow
[Ref.: #19494]	Incubation period	10-14 days
[Ref.: #19494]	Cultivation medium used	ISP 4

[Ref.: #19494]	Colony color	Yellow
[Ref.: #19494]	Incubation period	10-14 days
[Ref.: #19494]	Cultivation medium used	ISP 5

[Ref.: #19494]	Colony color	Yellow
[Ref.: #19494]	Incubation period	10-14 days
[Ref.: #19494]	Cultivation medium used	ISP 6

[Ref.: #19494]	Colony color	Yellow
[Ref.: #19494]	Incubation period	10-14 days
[Ref.: #19494]	Cultivation medium used	ISP 7

[Ref.: #19494]	Incubation period	10-14 days
[Ref.: #19494]	Cultivation medium used	ISP 3

[Ref.: #9905]	Name of produced compound	septacidin
[Ref.: #9905]	Name of produced compound	restriction endonuclease SfiI
[Ref.: #19494]	Name of produced compound	Cephamycin B
[Ref.: #19494]	Name of produced compound	Streptenole
[Ref.: #19494]	Name of produced compound	Septacidin

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #19494]		NaCl		growth	0	%

API® 20E:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	beta-GalactosidaseONPG	Arginine dihydrolaseADH (Arg)	Lysine decarboxylaseLDC (Lys)	Ornithine decarboxylaseODC	Citrate utilizationCIT	H2S productionH2S	Urease/urea hydrolysisURE	Tryptophan deaminaseTDA (Trp)	Indole productionIND	Acetoin production (Voges Proskauer test)VP	Gelatinase/gelatin hydrolysisGEL	Fermentation/oxidation of D-glucoseGLU	Fermentation/oxidation of D-mannitolMAN	Fermentation/oxidation of inositolINO	Fermentation/oxidation of sorbitolSor	Fermentation/oxidation of L-rhamnoseRHA	Fermentation/oxidation of sucroseSAC	Fermentation/oxidation of melibioseMEL	Fermentation/oxidation of amygdalinAMY	Fermentation/oxidation of L-arabinoseARA	Cytochrome oxidaseOX	Nitrite productionNO2	Reduction to N2N2	MotilityMOB	Growth on MacConkey mediumMAC	Oxidative catabolisation of D-glucoseOF-O	Fermentation of D-glucoseOF-F
[Ref.: #19494]	352	+	-	-	-	-	-	-	+	-	-	-	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.

	Metabolite	Utilization activity
[Ref.: #19494]	Arabinose	+
[Ref.: #19494]	Cellulose	-
[Ref.: #19494]	Fructose	+
[Ref.: #19494]	Glucose	+
[Ref.: #19494]	Inositol	-
[Ref.: #19494]	Mannitol	+
[Ref.: #19494]	Raffinose	-
[Ref.: #19494]	Rhamnose	-
[Ref.: #19494]	Sucrose	+
[Ref.: #19494]	Xylose	+

[Ref.: #19494]	Multicellular complex forming ability	yes
[Ref.: #19494]	Multicellular complex name	Aerial Mycelium
[Ref.: #19494]	Multicellular complex color	Grey
[Ref.: #19494]	Medium Name (multicellularity)	ISP 2

[Ref.: #19494]	Multicellular complex forming ability	yes
[Ref.: #19494]	Multicellular complex name	Aerial Mycelium
[Ref.: #19494]	Multicellular complex color	Grey
[Ref.: #19494]	Medium Name (multicellularity)	ISP 3

[Ref.: #19494]	Multicellular complex forming ability	yes
[Ref.: #19494]	Multicellular complex name	Aerial Mycelium
[Ref.: #19494]	Multicellular complex color	Grey
[Ref.: #19494]	Medium Name (multicellularity)	ISP 4

[Ref.: #19494]	Multicellular complex forming ability	yes
[Ref.: #19494]	Multicellular complex name	Aerial Mycelium
[Ref.: #19494]	Multicellular complex color	Grey
[Ref.: #19494]	Medium Name (multicellularity)	ISP 5

[Ref.: #19494]	Multicellular complex forming ability	no
[Ref.: #19494]	Medium Name (multicellularity)	ISP 6

[Ref.: #19494]	Multicellular complex forming ability	yes
[Ref.: #19494]	Multicellular complex name	Aerial Mycelium
[Ref.: #19494]	Multicellular complex color	Grey
[Ref.: #19494]	Medium Name (multicellularity)	ISP 7

[Ref.: #19494]	Spore description	Formation of spore chains (spirales)(Sp), spore surface smooth
[Ref.: #19494]	Type of spore	spore
[Ref.: #19494]	Ability of spore formation	yes

Information on culture and growth conditionsCulture and growth conditions

[Ref.: #9905]

Culture medium

GYM STREPTOMYCES MEDIUM (DSMZ Medium 65), 28°C

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Culture medium growth

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Culture medium link

medium recipe provided by DSMZ

[Ref.: #19494]

Culture medium

ISP 2

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Culture medium growth

[Ref.: #19494]

Culture medium composition

expand / minimize

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Culture medium

ISP 3

[Ref.: #19494]

Culture medium growth

[Ref.: #19494]

Culture medium composition

expand / minimize

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Culture medium

ISP 4

[Ref.: #19494]

Culture medium growth

[Ref.: #19494]

Culture medium composition

expand / minimize

[Ref.: #19494]

Culture medium

ISP 5

[Ref.: #19494]

Culture medium growth

[Ref.: #19494]

Culture medium composition

expand / minimize

[Ref.: #19494]

Culture medium

ISP 6

[Ref.: #19494]

Culture medium growth

[Ref.: #19494]

Culture medium composition

expand / minimize

[Ref.: #19494]

Culture medium

ISP 7

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Culture medium growth

[Ref.: #19494]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #9905]			growth	28 ̊C
[Ref.: #19494]			optimum	28 ̊C

[Ref.: #9905]	Temperature range	mesophilic
[Ref.: #19494]	Temperature range	mesophilic

Information on isolation source, the sampling and environmental conditionsIsolation, sampling and environmental information

[Ref.: #9905]

Sample type/isolated from

soil

Isolation sources categories

#Environmental

#Terrestrial

#Soil

What are isolation sources categories?

* marker position based on {}

Information on possible application of the strain and its possible interaction with e.g. potential hostsApplication and interaction

[Ref.: #9905]	Biosafety level	1	Risk group (German classification)
[Ref.: #19494]	Biosafety level	1	Risk group (German classification)

Information on genomic background e.g. entries in nucleic sequence databassMolecular biology

Sequence information:

Only first 5 entries are displayed. Click here to see all.

	Sequence database	Sequence accession description	Sequence accession number	Sequence length (bp)	Associated NCBI tax ID
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Streptomyces fimbriatus strain DSM 40942 16S ribosomal RNA gene, partial sequence	AY999844	1423	68197	*
[Ref.: #20218]	Marker Gene (DDBJ Direct submission)	Streptomyces fimbriatus gene for 16S rRNA, partial sequence, strain: NBRC 15411	AB184659	1463	68197	*
[Ref.: #20218]	Marker Gene (DDBJ Direct submission)	Streptomyces fimbriatus gene for non-ribosomal peptide synthetase, partial cds, strain: NBRC 15411, clone: UN4	AB432681	745	68197	*
[Ref.: #20218]	Marker Gene (DDBJ Direct submission)	Streptomyces fimbriatus gene for non-ribosomal peptide synthetase, partial cds, strain: NBRC 15411, clone: UN2	AB432682	703	68197	*
[Ref.: #20218]	Marker Gene (DDBJ Direct submission)	Streptomyces fimbriatus gene for non-ribosomal peptide synthetase, partial cds, strain: NBRC 15411, clone: UN3	AB432683	706	68197	*
[Ref.: #20218]	Marker Gene (DDBJ Direct submission)	Streptomyces fimbriatus gene for non-ribosomal peptide synthetase, partial cds, strain: NBRC 15411, clone: UN7	AB432684	733	68197	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Streptomyces fimbriatus strain NRRL B-3175 ATP synthase beta subunit (atpD) gene, partial cds	KJ137022	496	68197	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Streptomyces fimbriatus strain NRRL B-3175 DNA gyrase B (gyrB) gene, partial cds	KJ137039	408	68197	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Streptomyces fimbriatus strain NRRL B-3175 recombinase A (recA) gene, partial cds	KJ137056	504	68197	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Streptomyces fimbriatus strain NRRL B-3175 RNA polymerase subunit B (rpoB) gene, partial cds	KJ137073	540	68197	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Streptomyces fimbriatus strain NRRL B-3175 tryptophan synthetase subunit B (trpB) gene, partial cds	KJ137090	571	68197	*

Availability in culture collectionsStrain availability

[Ref.: #9905]

Culture collection no.

DSM 40942, ATCC 15051, CBS 453.65, NRRL B-3175

[Ref.: #9905]

Strain history

<- NRRL

[Ref.: #20218]

Associated Passport(s) in StrainInfo

166528, 98087, 228982, 98090

References

#9905

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 40942

#19494

Wink, J.: Compendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig .

#20215

Leibniz Institute DSMZ D.Gleim, M.Kracht, N.Weiss et. al.: Prokaryotic Nomenclature Up-to-date - compilation of all names of Bacteria and Archaea, validly published according to the Bacteriological Code since 1. Jan. 1980, and validly published nomenclatural changes since .

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

* These References are textmined

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