Desulfitobacterium dehalogenans JW/IU-DC1 | Type strain | DSM 9161, ATCC 51507

Strain identifier

BacDive ID: 11762

Type strain:

Species: Desulfitobacterium dehalogenans

Strain Designation: JW/IU-DC1

Section

Name and taxonomic classification
Morphology and physiology
Culture and growth conditions
Isolation, sampling and environmental information
Application and interaction
Molecular biology
Strain availability

External links

Information on the name and the taxonomic classification.Name and taxonomic classification

[Ref.: #3497]	Domain	Bacteria
[Ref.: #3497]	Phylum	Firmicutes
[Ref.: #3497]	Class	Clostridia
[Ref.: #3497]	Order	Clostridiales
[Ref.: #3497]	Family	Desulfitobacteriaceae
[Ref.: #3497]	Genus	Desulfitobacterium
[Ref.: #3497]	Species	Desulfitobacterium dehalogenans
[Ref.: #3497]	Full Scientific Name	Desulfitobacterium dehalogenans Utkin et al. 1994
[Ref.: #3497]	Strain Designation	JW/IU-DC1
[Ref.: #3497]	Type strain

		Prokaryotic Nomenclature Up-to-date (PNU)	Taxonomical status	Literature reference
[Ref.: #20215]	Genus	Desulfitobacterium	gen. nov. (VP)	Int. J. Syst. Evol. Microbiol. 62:2576*
[Ref.: #20215]	Species	Desulfitobacterium dehalogenans	sp. nov. (VP)	Int. J. Syst. Bacteriol. 44:615*
[Ref.: #20215]	Full Scientific Name	Desulfitobacterium dehalogenans Utkin et al. 1994

Information on morphological and physiological propertiesMorphology and physiology

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Oxygen tolerance

anaerobe

Information on culture and growth conditionsCulture and growth conditions

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Culture medium

DESULFITOBACTERIUM MEDIUM (DSMZ Medium 663), 37°C, anaerobic

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Culture medium growth

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Culture medium link

medium recipe provided by DSMZ

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Culture medium

DESULFITOBACTERIUM HAFNIENSE MEDIUM (DSMZ Medium 720), 37°C, anaerobic

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Culture medium growth

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Culture medium link

medium recipe provided by DSMZ

	Temperatures	Kind of temperature		Temperature
[Ref.: #3497]			growth	37 ̊C

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Temperature range

mesophilic

Information on isolation source, the sampling and environmental conditionsIsolation, sampling and environmental information

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Sample type/isolated from

freshwater pond sediment

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Geographic location (country and/or sea, region)

Athens, Ga., Sandy Creek Nature Park

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Country

USA

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Continent

North America

Isolation sources categories

#Environmental	#Aquatic	#Freshwater
#Environmental	#Aquatic	#Pond (small)
#Environmental	#Aquatic	#Sediment

What are isolation sources categories?

* marker position based on {}

Information on possible application of the strain and its possible interaction with e.g. potential hostsApplication and interaction

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Biosafety level

Risk group (German classification)

Information on genomic background e.g. entries in nucleic sequence databassMolecular biology

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GC-content

44 mol%

thermal denaturation, midpoint method (Tm)

Sequence information:

Only first 5 entries are displayed. Click here to see all.

	Sequence database	Sequence accession description	Sequence accession number	Sequence length (bp)	Associated NCBI tax ID
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Desulfitobacterium dehalogenans dissimilatory sulfite reductase alpha subunit (dsrA) and dissimilatory sulfite reductase beta subunit (dsrB) genes, partial cds	AF337903	1753	756499	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Desulfitobacterium dehalogenans ATCC 51507 ctg134, whole genome shotgun sequence	AGJH01000001	473863	756499	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Desulfitobacterium dehalogenans ATCC 51507 ctg133, whole genome shotgun sequence	AGJH01000002	346615	756499	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Desulfitobacterium dehalogenans ATCC 51507 ctg132, whole genome shotgun sequence	AGJH01000003	304537	756499	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Desulfitobacterium dehalogenans ATCC 51507 ctg131, whole genome shotgun sequence	AGJH01000004	264779	756499	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Desulfitobacterium dehalogenans ATCC 51507 ctg130, whole genome shotgun sequence	AGJH01000005	225738	756499	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Desulfitobacterium dehalogenans ATCC 51507 ctg129, whole genome shotgun sequence	AGJH01000006	190927	756499	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Desulfitobacterium dehalogenans ATCC 51507 ctg128, whole genome shotgun sequence	AGJH01000007	162588	756499	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Desulfitobacterium dehalogenans ATCC 51507 ctg127, whole genome shotgun sequence	AGJH01000008	134501	756499	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Desulfitobacterium dehalogenans ATCC 51507 ctg125, whole genome shotgun sequence	AGJH01000009	131864	756499	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Desulfitobacterium dehalogenans ATCC 51507 ctg126, whole genome shotgun sequence	AGJH01000010	118233	756499	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Desulfitobacterium dehalogenans ATCC 51507 ctg123, whole genome shotgun sequence	AGJH01000011	111167	756499	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Desulfitobacterium dehalogenans ATCC 51507 ctg124, whole genome shotgun sequence	AGJH01000012	102442	756499	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Desulfitobacterium dehalogenans ATCC 51507 ctg122, whole genome shotgun sequence	AGJH01000013	95074	756499	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Desulfitobacterium dehalogenans ATCC 51507 ctg120, whole genome shotgun sequence	AGJH01000014	87324	756499	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Desulfitobacterium dehalogenans ATCC 51507 ctg118, whole genome shotgun sequence	AGJH01000015	85692	756499	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Desulfitobacterium dehalogenans ATCC 51507 ctg119, whole genome shotgun sequence	AGJH01000016	82741	756499	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Desulfitobacterium dehalogenans ATCC 51507 ctg121, whole genome shotgun sequence	AGJH01000017	78183	756499	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Desulfitobacterium dehalogenans ATCC 51507 ctg116, whole genome shotgun sequence	AGJH01000018	70411	756499	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Desulfitobacterium dehalogenans ATCC 51507 ctg117, whole genome shotgun sequence	AGJH01000019	66718	756499	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Desulfitobacterium dehalogenans ATCC 51507 ctg115, whole genome shotgun sequence	AGJH01000020	60176	756499	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Desulfitobacterium dehalogenans ATCC 51507 ctg114, whole genome shotgun sequence	AGJH01000021	59033	756499	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Desulfitobacterium dehalogenans ATCC 51507 ctg87, whole genome shotgun sequence	AGJH01000022	57721	756499	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Desulfitobacterium dehalogenans ATCC 51507 ctg109, whole genome shotgun sequence	AGJH01000023	56065	756499	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Desulfitobacterium dehalogenans ATCC 51507 ctg108, whole genome shotgun sequence	AGJH01000024	55074	756499	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Desulfitobacterium dehalogenans ATCC 51507 ctg110, whole genome shotgun sequence	AGJH01000025	54301	756499	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Desulfitobacterium dehalogenans ATCC 51507 ctg113, whole genome shotgun sequence	AGJH01000026	53940	756499	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Desulfitobacterium dehalogenans ATCC 51507 ctg111, whole genome shotgun sequence	AGJH01000027	51431	756499	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Desulfitobacterium dehalogenans ATCC 51507 ctg106, whole genome shotgun sequence	AGJH01000028	51213	756499	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Desulfitobacterium dehalogenans ATCC 51507 ctg112, whole genome shotgun sequence	AGJH01000029	51100	756499	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Desulfitobacterium dehalogenans ATCC 51507 ctg105, whole genome shotgun sequence	AGJH01000030	47188	756499	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Desulfitobacterium dehalogenans ATCC 51507 ctg107, whole genome shotgun sequence	AGJH01000031	45717	756499	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Desulfitobacterium dehalogenans ATCC 51507 ctg104, whole genome shotgun sequence	AGJH01000032	44477	756499	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Desulfitobacterium dehalogenans ATCC 51507 ctg102, whole genome shotgun sequence	AGJH01000033	43524	756499	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Desulfitobacterium dehalogenans ATCC 51507 ctg103, whole genome shotgun sequence	AGJH01000034	41254	756499	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Desulfitobacterium dehalogenans ATCC 51507 ctg101, whole genome shotgun sequence	AGJH01000035	38340	756499	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Desulfitobacterium dehalogenans ATCC 51507 ctg100, whole genome shotgun sequence	AGJH01000036	32214	756499	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Desulfitobacterium dehalogenans ATCC 51507 ctg98, whole genome shotgun sequence	AGJH01000037	30645	756499	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Desulfitobacterium dehalogenans ATCC 51507 ctg99, whole genome shotgun sequence	AGJH01000038	25488	756499	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Desulfitobacterium dehalogenans ATCC 51507 ctg97, whole genome shotgun sequence	AGJH01000039	22959	756499	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Desulfitobacterium dehalogenans ATCC 51507 ctg86, whole genome shotgun sequence	AGJH01000040	21822	756499	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Desulfitobacterium dehalogenans ATCC 51507 ctg95, whole genome shotgun sequence	AGJH01000041	21271	756499	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Desulfitobacterium dehalogenans ATCC 51507 ctg84, whole genome shotgun sequence	AGJH01000042	20091	756499	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Desulfitobacterium dehalogenans ATCC 51507 ctg96, whole genome shotgun sequence	AGJH01000043	18492	756499	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Desulfitobacterium dehalogenans ATCC 51507 ctg92, whole genome shotgun sequence	AGJH01000044	17912	756499	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Desulfitobacterium dehalogenans ATCC 51507 ctg94, whole genome shotgun sequence	AGJH01000045	17504	756499	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Desulfitobacterium dehalogenans ATCC 51507 ctg91, whole genome shotgun sequence	AGJH01000046	13789	756499	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Desulfitobacterium dehalogenans ATCC 51507 ctg93, whole genome shotgun sequence	AGJH01000047	13729	756499	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Desulfitobacterium dehalogenans ATCC 51507 ctg89, whole genome shotgun sequence	AGJH01000048	13554	756499	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Desulfitobacterium dehalogenans ATCC 51507 ctg88, whole genome shotgun sequence	AGJH01000049	13428	756499	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Desulfitobacterium dehalogenans ATCC 51507 ctg85, whole genome shotgun sequence	AGJH01000050	11940	756499	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Desulfitobacterium dehalogenans ATCC 51507 ctg83, whole genome shotgun sequence	AGJH01000051	9098	756499	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Desulfitobacterium dehalogenans ATCC 51507 ctg80, whole genome shotgun sequence	AGJH01000052	6351	756499	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Desulfitobacterium dehalogenans ATCC 51507 ctg82, whole genome shotgun sequence	AGJH01000053	5651	756499	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Desulfitobacterium dehalogenans ATCC 51507 ctg90, whole genome shotgun sequence	AGJH01000054	4119	756499	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Desulfitobacterium dehalogenans ATCC 51507 ctg79, whole genome shotgun sequence	AGJH01000055	2874	756499	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Desulfitobacterium dehalogenans ATCC 51507 ctg78, whole genome shotgun sequence	AGJH01000056	2841	756499	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Desulfitobacterium dehalogenans ATCC 51507 ctg77, whole genome shotgun sequence	AGJH01000057	1846	756499	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Desulfitobacterium dehalogenans ATCC 51507 ctg81, whole genome shotgun sequence	AGJH01000058	1783	756499	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Desulfitobacterium dehalogenans ATCC 51507 ctg73, whole genome shotgun sequence	AGJH01000059	1133	756499	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Desulfitobacterium dehalogenans ATCC 51507 ctg76, whole genome shotgun sequence	AGJH01000060	986	756499	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Desulfitobacterium dehalogenans ATCC 51507 ctg75, whole genome shotgun sequence	AGJH01000061	969	756499	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Desulfitobacterium dehalogenans ATCC 51507 ctg74, whole genome shotgun sequence	AGJH01000062	881	756499	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Desulfitobacterium dehalogenans ATCC 51507 ctg72, whole genome shotgun sequence	AGJH01000063	718	756499	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Desulfitobacterium dehalogenans ATCC 51507 ctg66, whole genome shotgun sequence	AGJH01000064	611	756499	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Desulfitobacterium dehalogenans ATCC 51507 ctg71, whole genome shotgun sequence	AGJH01000065	556	756499	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Desulfitobacterium dehalogenans ATCC 51507 ctg70, whole genome shotgun sequence	AGJH01000066	554	756499	*
[Ref.: #20218]	GenBank Genome project data	Desulfitobacterium dehalogenans ATCC 51507, complete genome	CP003348	4321753	756499	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Desulfitobacterium dehalogenans strain DSM 9161 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence	DQ834677	662	756499	*
[Ref.: #20218]	Marker Gene (EMBL Direct submission)	TPA: Desulfitobacterium dehalogenans ATCC 51507 transfer-messenger mRNA Desul_dehal_51507, single chain mature transcript	HG788410	351	756499	*
[Ref.: #3497]	INSDC	Desulfitobacterium dehalogenans 16S ribosomal RNA	L28946	1514	756499

Availability in culture collectionsStrain availability

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Culture collection no.

DSM 9161, ATCC 51507

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Strain history

<- J. Wiegel; JW/IU-DC1 <- I. Utkin and J. Wiegel {1993}

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Associated Passport(s) in StrainInfo

161328, 115750

References

#3497

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 9161

#20215

Leibniz Institute DSMZ D.Gleim, M.Kracht, N.Weiss et. al.: Prokaryotic Nomenclature Up-to-date - compilation of all names of Bacteria and Archaea, validly published according to the Bacteriological Code since 1. Jan. 1980, and validly published nomenclatural changes since .

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

* These References are textmined

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