Mycobacterium sphagni Sph 38 | Type strain | DSM 44076, ATCC 33027

Strain identifier

BacDive ID: 8436

Type strain:

Species: Mycobacterium sphagni

Strain Designation: Sph 38

Section

Name and taxonomic classification
Culture and growth conditions
Isolation, sampling and environmental information
Application and interaction
Molecular biology
Strain availability

External links

Information on the name and the taxonomic classification.Name and taxonomic classification

[Ref.: #11475]	Domain	Bacteria
[Ref.: #11475]	Phylum	Actinobacteria
[Ref.: #11475]	Class	Actinobacteria
[Ref.: #11475]	Order	Actinomycetales
[Ref.: #11475]	Family	Mycobacteriaceae
[Ref.: #11475]	Genus	Mycobacterium
[Ref.: #11475]	Species	Mycobacterium sphagni
[Ref.: #11475]	Full Scientific Name	Mycobacterium sphagni Kazda 1980
[Ref.: #11475]	Strain Designation	Sph 38
[Ref.: #11475]	Type strain

		Prokaryotic Nomenclature Up-to-date (PNU)	Taxonomical status	Literature reference
[Ref.: #20215]	Domain	Bacteria
[Ref.: #20215]	Phylum	Actinobacteria
[Ref.: #20215]	Class	Actinobacteria		Int. J. Syst. Bacteriol. 47:483*
[Ref.: #20215]	Family	Mycobacteriaceae		Int. J. Syst. Bacteriol. 30:236
[Ref.: #20215]	Genus	Mycobacterium	genus (AL)	Int. J. Syst. Bacteriol. 30:324 (AL)
[Ref.: #20215]	Species	Mycobacterium sphagni	sp. nov. (VP)	Int. J. Syst. Bacteriol. 30:81*
[Ref.: #20215]	Full Scientific Name	Mycobacterium sphagni Kazda 1980

Information on culture and growth conditionsCulture and growth conditions

[Ref.: #11475]

Culture medium

MIDDLEBROOK MEDIUM (DSMZ Medium 645), 28°C

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Culture medium growth

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Culture medium link

medium recipe provided by DSMZ

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Culture medium

LÖWENSTEIN-JENSEN MEDIUM (DSMZ Medium 354), 28°C

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Culture medium growth

[Ref.: #11475]

Culture medium link

medium recipe provided by DSMZ

	Temperatures	Kind of temperature		Temperature
[Ref.: #11475]			growth	28 ̊C

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Temperature range

mesophilic

Information on isolation source, the sampling and environmental conditionsIsolation, sampling and environmental information

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Sample type/isolated from

sphagnum moss, Sphagnum recurvum

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Geographic location (country and/or sea, region)

Salemer Moor

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Country

Germany

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Continent

Europe

Isolation sources categories

#Host-associates

#Plants

#Peat moss

What are isolation sources categories?

* marker position based on {}

Information on possible application of the strain and its possible interaction with e.g. potential hostsApplication and interaction

[Ref.: #11475]

Biosafety level

Risk group (German classification)

Information on genomic background e.g. entries in nucleic sequence databassMolecular biology

Sequence information:

Only first 5 entries are displayed. Click here to see all.

	Sequence database	Sequence accession description	Sequence accession number	Sequence length (bp)	Associated NCBI tax ID
[Ref.: #20218]	INSDC Sequence	M.sphagni 16S ribosomal RNA gene	M59283	146	1786	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Mycobacterium sphagni 23S rRNA, partial sequence	U24550	238	1786	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Mycobacterium sphagni strain DSM 44076 65 kDa heat shock protein (hsp65) gene, partial cds	AF547877	424	1786	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Mycobacterium sphagni strain DSM 44076 16S ribosomal RNA gene, partial sequence	AF547968	540	1786	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Mycobacterium sphagni strain DSM 44076 superoxide dismutase (sod) gene, partial cds	AY544866	442	1786	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Mycobacterium sphagni strain DSM 44076 RNA polymerase (rpoB) gene, partial cds	AY544965	398	1786	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Mycobacterium sphagni strain DSM 44076 elongation factor Tu (tuf) gene, partial cds	DQ986074	649	1786	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Mycobacterium sphagni strain DSM 44076 SmpB (smpB) gene, partial cds	EF686854	312	1786	*
[Ref.: #20218]	EMBL Genome project data	Mycobacterium sphagni partial 16S rRNA gene, type strain DSM44076T	FR733719	1505	1786	*

Availability in culture collectionsStrain availability

[Ref.: #11475]

Culture collection no.

DSM 44076, ATCC 33027

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Strain history

<- J. Kazda, Borstel; Sph 38

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Associated Passport(s) in StrainInfo

49633, 49632

References

#11475

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 44076

#20215

Leibniz Institute DSMZ D.Gleim, M.Kracht, N.Weiss et. al.: Prokaryotic Nomenclature Up-to-date - compilation of all names of Bacteria and Archaea, validly published according to the Bacteriological Code since 1. Jan. 1980, and validly published nomenclatural changes since .

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

* These References are textmined

Search for species Mycobacterium sphagni in external resources:
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