Methanococcoides methylutens TMA-10 | Type strain | DSM 2657, ATCC 33938, OCM 158

Strain identifier

BacDive ID: 7058

Type strain:

Species: Methanococcoides methylutens

Strain Designation: TMA-10

Culture col. no.: DSM 2657, ATCC 33938, OCM 158

Section

Name and taxonomic classification
Morphology and physiology
Culture and growth conditions
Isolation, sampling and environmental information
Application and interaction
Molecular biology
Strain availability

External links

Information on the name and the taxonomic classification.Name and taxonomic classification

[Ref.: #1191]	Domain	Archaea
[Ref.: #1191]	Phylum	Euryarchaeota
[Ref.: #1191]	Class	Methanomicrobia
[Ref.: #1191]	Order	Methanosarcinales
[Ref.: #1191]	Family	Methanosarcinaceae
[Ref.: #1191]	Genus	Methanococcoides
[Ref.: #1191]	Species	Methanococcoides methylutens
[Ref.: #1191]	Full Scientific Name	Methanococcoides methylutens Sowers and Ferry 1985
[Ref.: #1191]	Strain Designation	TMA-10
[Ref.: #1191]	Type strain

		Prokaryotic Nomenclature Up-to-date (PNU)	Taxonomical status	Literature reference
	Last PNU update	13-08-2019 (DD-MM-YYYY)
[Ref.: #20215]	Domain	Archaea
[Ref.: #20215]	Phylum	Euryarchaeota
[Ref.: #20215]	Class	Methanomicrobia		Int. J. Syst. Evol. Microbiol. 52:685
[Ref.: #20215]	Family	Methanosarcinaceae		Int. J. Syst. Bacteriol. 31:215
[Ref.: #20215]	Genus	Methanococcoides	gen. nov. (VL)	Int. J. Syst. Bacteriol. 35:223
[Ref.: #20215]	Species	Methanococcoides methylutens	sp. nov. (VL)	Int. J. Syst. Bacteriol. 35:223
[Ref.: #20215]	Full Scientific Name	Methanococcoides methylutens Sowers and Ferry 1985

Information on morphological and physiological propertiesMorphology and physiology

[Ref.: #1191]

Oxygen tolerance

anaerobe

Information on culture and growth conditionsCulture and growth conditions

[Ref.: #1191]

Culture medium

METHANOCOCCOIDES MEDIUM (N2/CO2) (DSMZ Medium 280), 30°C, anaerobic

[Ref.: #1191]

Culture medium growth

[Ref.: #1191]

Culture medium link

medium recipe provided by DSMZ

	Temperatures	Kind of temperature		Temperature
[Ref.: #1191]			growth	30 ̊C

[Ref.: #1191]

Temperature range

mesophilic

Information on isolation source, the sampling and environmental conditionsIsolation, sampling and environmental information

[Ref.: #1191]

Sample type/isolated from

marine sediment

[Ref.: #1191]

Geographic location (country and/or sea, region)

California, Scripps Canyon near La Jolla

[Ref.: #1191]

Country

USA

[Ref.: #1191]

Continent

North America

Isolation sources categories

#Environmental	#Aquatic	#Marine
#Environmental	#Aquatic	#Sediment

What are isolation sources categories?

* marker position based on {}

Information on possible application of the strain and its possible interaction with e.g. potential hostsApplication and interaction

[Ref.: #1191]

Biosafety level

Risk group (German classification)

Information on genomic background e.g. entries in nucleic sequence databassMolecular biology

[Ref.: #1191]

GC-content

42.0 mol%

Sequence information:

	Sequence database	Sequence accession description	Sequence accession number	Sequence type	Sequence length (bp)	Associated NCBI tax ID
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Methanococcoides methylutens ribosomal protein S7 (s7) gene, partial cds, elongation factor 2 (ef-2) gene, complete cds, and elongation factor 1 alpha (ef-1alpha) gene, partial cds	AF022779		2846	2226	*
[Ref.: #20218]	INSDC Sequence	Methylcoccoides methylutans 16S ribosomal RNA	M59127	16S	1477	2226	*
[Ref.: #20218]	Marker Gene (EMBL Direct submission)	M.methylutens 5S ribosomal RNA	X62863		124	2226	*
[Ref.: #1191]	EMBL Genome project data		FR733669

Availability in culture collectionsStrain availability

[Ref.: #1191]

Culture collection no.

DSM 2657, ATCC 33938, OCM 158

[Ref.: #1191]

Strain history

<- K.R. Sowers and J.G. Ferry, TMA-10

[Ref.: #20218]

Associated Passport(s) in StrainInfo

158118, 109958

References

#1191

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 2657

#20215

Leibniz Institute DSMZ D.Gleim, M.Kracht, N.Weiss et. al.: Prokaryotic Nomenclature Up-to-date - compilation of all names of Bacteria and Archaea, validly published according to the Bacteriological Code since 1. Jan. 1980, and validly published nomenclatural changes since .

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

* These References are textmined

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