Salmonella enterica LT2 | Type strain | DSM 17058, ATCC 43971, CIP 60.62, NCIMB 11450, NCTC 12416, CCUG 42060

Strain identifier

BacDive ID: 5117

Type strain:

Species: Salmonella enterica

Strain Designation: LT2

Culture col. no.: DSM 17058, ATCC 43971, CIP 60.62, NCIMB 11450, NCTC 12416, CCUG 42060

Section

Name and taxonomic classification
Morphology and physiology
Culture and growth conditions
Application and interaction
Molecular biology
Strain availability

External links

Salmonella enterica LT2 is an aerobe, mesophilic bacterium that was isolated from isolation material unknown.

aerobe
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification.Name and taxonomic classification

	Last LPSN update	10-09-2020 (DD-MM-YYYY)
	Domain	Bacteria
	Phylum	Proteobacteria
	Class	Gammaproteobacteria
	Order	Enterobacterales
	Family	Enterobacteriaceae
	Genus	Salmonella
	Species	Salmonella enterica
	Full Scientific Name (PNU)	Salmonella enterica (ex Kauffmann and Edwards 1952) Le Minor and Popoff 1987

	Synonym	Bacillus typhimurium
	Synonym	Bacillus typhi
	Synonym	Salmonella choleraesuis
	Synonym	Salmonella typhimurium
	Synonym	Bacillus enteritidis
	Synonym	Bacillus choleraesuis
	Synonym	Salmonella paratyphi
	Synonym	Salmonella enteritidis
	Synonym	Salmonella typhi

Information on morphological and physiological propertiesMorphology and physiology

[Ref.: #22945]	Cell length	2 µm
[Ref.: #22945]	Cell width	0.5-1.5 µm

[Ref.: #22945]

Name of produced compound

Hydrogen sulfide

	Enzyme	Enzyme activity	EC number
[Ref.: #22945]	beta-galactosidase	-	3.2.1.23
[Ref.: #22945]	beta-glucuronidase	-	3.2.1.31
[Ref.: #22945]	catalase	+	1.11.1.6
[Ref.: #22945]	cytochrome oxidase	-	1.9.3.1
[Ref.: #22945]	gelatinase	-
[Ref.: #22945]	lysine decarboxylase	+	4.1.1.18
[Ref.: #22945]	ornithine decarboxylase	+	4.1.1.17
[Ref.: #22945]	urease	-	3.5.1.5

API® 20E:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	beta-GalactosidaseONPG	Arginine dihydrolaseADH (Arg)	Lysine decarboxylaseLDC (Lys)	Ornithine decarboxylaseODC	Citrate utilizationCIT	H2S productionH2S	Urease/urea hydrolysisURE	Tryptophan deaminaseTDA (Trp)	Indole productionIND	Acetoin production (Voges Proskauer test)VP	Gelatinase/gelatin hydrolysisGEL	Fermentation/oxidation of D-glucoseGLU	Fermentation/oxidation of D-mannitolMAN	Fermentation/oxidation of inositolINO	Fermentation/oxidation of sorbitolSor	Fermentation/oxidation of L-rhamnoseRHA	Fermentation/oxidation of sucroseSAC	Fermentation/oxidation of melibioseMEL	Fermentation/oxidation of amygdalinAMY	Fermentation/oxidation of L-arabinoseARA	Cytochrome oxidaseOX	Nitrite productionNO2	Reduction to N2N2	MotilityMOB	Growth on MacConkey mediumMAC	Oxidative catabolisation of D-glucoseOF-O	Fermentation of D-glucoseOF-F
[Ref.: #6727]	7549	-	+	+	+	+	+	-	-	-	+	-	+	+	+	+	+	-	+	-	+	-	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.
[Ref.: #6727]	6417	-	+	+	+	+	+	-	-	-	+	-	+	+	+	+	+	-	+	-	+	-	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.
[Ref.: #6727]	6346	-	+	+	+	+	+	-	-	-	+/-	-	+	+	+	+	+	-	+	-	+	-	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.

API® ID32E:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Ornithine decarboxylaseODC	Arginine dihydrolaseADH (Arg)	Lysine decarboxylaseLDC (Lys)	Urease/urea hydrolysisURE	Acid from L-arabitolLARL	Acid from D-galacturonic acidGAT	Acid from 5-Ketogluconate5KG	LipaseLIP	Phenol red (Acidification)RP	beta-Glucosidasebeta GLU	Acid from D-mannitolMAN	Acid from maltoseMAL	Acid from D-adonitolADO	Acid from palatinosePLE	beta-Glucuronidasebeta GUR	MalonateMNT	Indole productionIND	N-Acetyl-beta-Glucosaminidasebeta NAG	beta-Galactosidasebeta GAL	Acid from D-glucoseGLU	Acid from sucroseSAC	Acid from L-arabinoseLARA	Acid from D-arabitolDARL	alpha-Glucosidasealpha GLU	alpha-Galactosidasealpha GAL	Acid from trehaloseTRE	Acid from L-rhamnoseRHA	Acid from inositolINO	Acid from cellobioseCEL	Acid from sorbitolSOR	alpha-MaltosidasealphaMAL	L-aspartic acid arylamidaseAspA
[Ref.: #55324]	1532	+	+	+	-	-	-	+	+	+	-	+	+	-	-	-	-	-	-	-	+	-	+	-	-	+	-	+	+	-	+	-	-

	Metabolite production	Metabolite	Production
[Ref.: #22945]		hydrogen sulfide ChEBI	yes
[Ref.: #22945]		indole ChEBI	no

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #22945]	2-dehydro-D-gluconate ChEBI	-	growth
[Ref.: #22945]	2-oxoglutarate ChEBI	-	growth
[Ref.: #22945]	3-coumarate ChEBI	-	growth
[Ref.: #22945]	3-hydroxybutyrate ChEBI	-	growth
[Ref.: #22945]	3-O-methyl-D-glucose ChEBI	-	growth
[Ref.: #22945]	3-phenylpropionate ChEBI	-	growth
[Ref.: #22945]	5-aminovalerate ChEBI	-	growth
[Ref.: #22945]	arabinose ChEBI	+	builds acid from
[Ref.: #22945]	benzoate ChEBI	-	growth
[Ref.: #22945]	betaine ChEBI	-	growth
[Ref.: #22945]	cellobiose ChEBI	-	builds acid from
[Ref.: #22945]	cellobiose ChEBI	-	growth
[Ref.: #22945]	cis-aconitate ChEBI	+	growth
[Ref.: #22945]	citrate ChEBI	+	growth
[Ref.: #22945]	D-alanine ChEBI	+	growth
[Ref.: #22945]	D-arabitol ChEBI	-	growth
[Ref.: #22945]	D-fructose ChEBI	+	growth
[Ref.: #22945]	D-galactose ChEBI	+	growth
[Ref.: #22945]	D-galacturonic acid ChEBI	-	growth
[Ref.: #22945]	D-glucarate ChEBI	+	growth
[Ref.: #22945]	D-gluconate ChEBI	+	growth
[Ref.: #22945]	D-glucosamine ChEBI	+	growth
[Ref.: #22945]	D-glucose ChEBI	+	growth
[Ref.: #22945]	D-glucuronate ChEBI	+	growth
[Ref.: #22945]	D-lyxose ChEBI	-	growth
[Ref.: #22945]	D-mannitol ChEBI	+	growth
[Ref.: #22945]	D-mannose ChEBI	+	growth
[Ref.: #22945]	D-ribose ChEBI	+	growth
[Ref.: #22945]	D-sorbitol ChEBI	+	growth
[Ref.: #22945]	D-tagatose ChEBI	+	growth
[Ref.: #22945]	D-trehalose ChEBI	+	growth
[Ref.: #22945]	D-xylose ChEBI	+	growth
[Ref.: #22945]	decanoate ChEBI	-	growth
[Ref.: #22945]	erythritol ChEBI	-	growth
[Ref.: #22945]	esculin ChEBI	-	growth
[Ref.: #22945]	ethanolamine ChEBI	+	growth
[Ref.: #22945]	fumarate ChEBI	+	growth
[Ref.: #22945]	galactarate ChEBI	+	builds acid from
[Ref.: #22945]	galactarate ChEBI	+	growth
[Ref.: #22945]	galactitol ChEBI	+	builds acid from
[Ref.: #22945]	galactitol ChEBI	+	growth
[Ref.: #22945]	galacturonate ChEBI	-	builds acid from
[Ref.: #22945]	gamma-aminobutyric acid ChEBI	-	growth
[Ref.: #22945]	gelatin ChEBI	-	hydrolysis
[Ref.: #22945]	gentiobiose ChEBI	-	growth
[Ref.: #22945]	gentisate ChEBI	+	growth
[Ref.: #22945]	glucose ChEBI	+	builds gas from
[Ref.: #22945]	glutarate ChEBI	-	growth
[Ref.: #22945]	glycerate ChEBI	+	growth
[Ref.: #22945]	glycerol ChEBI	+	growth
[Ref.: #22945]	histamine ChEBI	-	growth
[Ref.: #22945]	L-alanine ChEBI	+	growth
[Ref.: #22945]	L-arabinose ChEBI	+	growth
[Ref.: #22945]	L-arabitol ChEBI	-	growth
[Ref.: #22945]	L-aspartate ChEBI	+	growth
[Ref.: #22945]	L-fucose ChEBI	+	growth
[Ref.: #22945]	L-glutamate ChEBI	+	growth
[Ref.: #22945]	L-malate ChEBI	+	growth
[Ref.: #22945]	L-proline ChEBI	+	growth
[Ref.: #22945]	L-rhamnose ChEBI	+	growth
[Ref.: #22945]	L-serine ChEBI	+	growth
[Ref.: #22945]	L-sorbose ChEBI	-	growth
[Ref.: #22945]	L-tartrate ChEBI	+	growth
[Ref.: #22945]	lactate ChEBI	+	growth
[Ref.: #22945]	lactose ChEBI	-	builds acid from
[Ref.: #22945]	lactose ChEBI	-	growth
[Ref.: #22945]	lactulose ChEBI	-	growth
[Ref.: #22945]	malonate ChEBI	-	growth
[Ref.: #22945]	maltitol ChEBI	-	growth
[Ref.: #22945]	maltose ChEBI	+	builds acid from
[Ref.: #22945]	maltose ChEBI	+	growth
[Ref.: #22945]	maltotriose ChEBI	+	growth
[Ref.: #22945]	mannitol ChEBI	+	builds acid from
[Ref.: #22945]	mannose ChEBI	+	builds acid from
[Ref.: #22945]	melezitose ChEBI	-	growth
[Ref.: #22945]	melibiose ChEBI	+	growth
[Ref.: #22945]	melibiose ChEBI	+	builds acid from
[Ref.: #22945]	meso-tartrate ChEBI	+	growth
[Ref.: #22945]	methyl alpha-D-galactoside ChEBI	+	growth
[Ref.: #22945]	methyl alpha-D-glucopyranoside ChEBI	+	growth
[Ref.: #22945]	methyl beta-D-galactoside ChEBI	-	growth
[Ref.: #22945]	myo-inositol ChEBI	+	builds acid from
[Ref.: #22945]	myo-inositol ChEBI	+	growth
[Ref.: #22945]	N-acetyl-D-glucosamine ChEBI	+	growth
[Ref.: #22945]	nitrate ChEBI	+	reduction
[Ref.: #22945]	octanoate ChEBI	-	growth
[Ref.: #22945]	palatinose ChEBI	-	growth
[Ref.: #22945]	phenylacetate ChEBI	-	growth
[Ref.: #22945]	propionate ChEBI	+	growth
[Ref.: #22945]	protocatechuate ChEBI	-	growth
[Ref.: #22945]	putrescine ChEBI	-	growth
[Ref.: #22945]	quinate ChEBI	-	growth
[Ref.: #22945]	raffinose ChEBI	-	growth
[Ref.: #22945]	raffinose ChEBI	-	builds acid from
[Ref.: #22945]	rhamnose ChEBI	+	builds acid from
[Ref.: #22945]	ribitol ChEBI	-	builds acid from
[Ref.: #22945]	ribitol ChEBI	-	growth
[Ref.: #22945]	salicin ChEBI	-	builds acid from
[Ref.: #22945]	sorbitol ChEBI	+	builds acid from
[Ref.: #22945]	succinate ChEBI	+	growth
[Ref.: #22945]	sucrose ChEBI	-	builds acid from
[Ref.: #22945]	sucrose ChEBI	-	growth
[Ref.: #22945]	trans-aconitate ChEBI	-	growth
[Ref.: #22945]	trehalose ChEBI	+	builds acid from
[Ref.: #22945]	tricarballylate ChEBI	+	growth
[Ref.: #22945]	trigonelline ChEBI	-	growth
[Ref.: #22945]	tryptamine ChEBI	-	growth
[Ref.: #22945]	turanose ChEBI	-	growth
[Ref.: #22945]	urea ChEBI	-	hydrolysis
[Ref.: #22945]	xylitol ChEBI	+	builds acid from
[Ref.: #22945]	xylitol ChEBI	-	growth
	Only first 10 entries are displayed. Click here to see all.

[Ref.: #55324]

Oxygen tolerance

aerobe

Information on culture and growth conditionsCulture and growth conditions

[Ref.: #6727]

Culture medium

COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)

[Ref.: #6727]

Culture medium growth

[Ref.: #6727]

Culture medium link

medium recipe provided by DSMZ

[Ref.: #6727]

Culture medium

CASO AGAR (MERCK 105458) (DSMZ Medium 220)

[Ref.: #6727]

Culture medium growth

[Ref.: #6727]

Culture medium link

medium recipe provided by DSMZ

[Ref.: #33584]

Culture medium

MEDIUM 72- for trypto casein soja agar

[Ref.: #33584]

Culture medium growth

[Ref.: #33584]

Culture medium composition

expand / minimize

		Temperature
[Ref.: #6727]	growth	37 ̊C
[Ref.: #33584]	growth	30 ̊C
[Ref.: #55324]	growth	30 ̊C

[Ref.: #6727]	Temperature range	mesophilic
[Ref.: #33584]	Temperature range	mesophilic
[Ref.: #55324]	Temperature range	mesophilic

Information on possible application of the strain and its possible interaction with e.g. potential hostsApplication and interaction

[Ref.: #6727]

Biosafety level

Risk group (German classification)

Information on genomic background e.g. entries in nucleic sequence databassMolecular biology

Sequence information:

Only first 5 entries are displayed. Click here to see all.

	Sequence database	Sequence accession description	Sequence accession number	Sequence type	Sequence length (bp)	Associated NCBI tax ID
[Ref.: #20218]	Marker Gene (EMBL Direct submission)	Salmonella enterica partial gyrB gene for DNA gyrase B subunit strain CIP 60.62T, ATCC 43971T, subsp. enterica, serotype typhimurium	AJ300529 ENA		972	28901 tax ID	*
[Ref.: #20218]	Marker Gene (EMBL Direct submission)	TPA: Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 SRP RNA for signal recognition particle RNA	HG323314 ENA		118	99287 tax ID	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Salmonella enterica subsp. enterica strain DSM 17058 16S ribosomal RNA gene, partial sequence	HQ012017 ENA	16S	936	59201 tax ID	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Salmonella enterica strain LT2 ATP synthase beta subunit (atpD) gene, partial cds	AF037141 ENA		793	28901 tax ID	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Salmonella enterica strain LT2 operon rrn, 16S-23S intergenic spacer region and tRNA-Glu gene, complete sequence	AF046813 ENA	16S	393	28901 tax ID	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Salmonella enterica strain LT2 operon rrn, 16S-23S intergenic spacer region, tRNA-Ile and tRNA-Ala genes, complete sequences	AF046814 ENA	16S	516	28901 tax ID	*
[Ref.: #20218]	Marker Gene (DDBJ Direct submission)	Salmonella enterica subsp. enterica serovar Typhimurium gene for 16S rRNA, partial sequence	D12814 ENA	16S	326	90371 tax ID	*
[Ref.: #20218]	Marker Gene (EMBL Direct submission)	S.enterica cpsB and cpsG genes for mannose-1-phosphate guanyltransferase and phosphomannomutase	X59886 ENA		3069	28901 tax ID	*
[Ref.: #20218]	Marker Gene (EMBL Direct submission)	S.enterica ansB mRNA, 5'end	X69868 ENA		147	28901 tax ID	*
[Ref.: #20218]	Marker Gene (DDBJ Direct submission)	Salmonella enterica subsp. enterica gene for 16S rRNA, partial sequence, strain: NBRC 13245	AB680380 ENA	16S	1467	59201 tax ID	*
[Ref.: #20218]	GenBank Genome project data	Salmonella enterica subsp. enterica serovar Typhimurium str. LT2, complete genome	AE006468 ENA	WGS	4857432	99287 tax ID	*
[Ref.: #20218]	GenBank Genome project data	Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 plasmid pSLT, complete sequence	AE006471 ENA		93939	99287 tax ID	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Salmonella typhimurium fragment STMF1	AF170176 ENA		43339	99287 tax ID	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Salmonella typhimurium fragment STMD1	AF233324 ENA		96086	99287 tax ID	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Salmonella typhimurium LT2 secreted effector J SseJ (sseJ) gene, complete cds	AF294582 ENA		1227	99287 tax ID	*

Availability in culture collectionsStrain availability

[Ref.: #6727]

Culture collection no.

DSM 17058, ATCC 43971, CIP 60.62, NCIMB 11450, NCTC 12416, CCUG 42060

[Ref.: #6727]

Strain history

<- CIP <- M. Demerec, Genetics Department, Carnigie Inst., New York; LT2

[Ref.: #20218]

Associated Passport(s) in StrainInfo

382808, 43351, 229656, 43355, 210058

References

#6727

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 17058

#20215

Leibniz Institute DSMZ D.Gleim, M.Kracht, N.Weiss et. al.: Prokaryotic Nomenclature Up-to-date - compilation of all names of Bacteria and Archaea, validly published according to the Bacteriological Code since 1. Jan. 1980, and validly published nomenclatural changes since .

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#22945

Leon Le Minor, Michel Y. Popoff: Designation of Salmonella enterica sp. nov., nom. rev., as the Type and Only Species of the Genus Salmonella: Request for an Opinion. IJSEM 37: 465 - 468 1987 ( DOI 10.1099/00207713-37-4-465 , PubMed 10319519 )

#33584 ; Curators of the CIP;
#55324 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 42060
* These References are textmined

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