Aquifex pyrophilus Kol5a | Type strain | DSM 6858, JCM 9492

Strain identifier

BacDive ID: 508

Type strain:

Species: Aquifex pyrophilus

Strain Designation: Kol5a

Section

Name and taxonomic classification
Culture and growth conditions
Isolation, sampling and environmental information
Application and interaction
Molecular biology
Strain availability

External links

Information on the name and the taxonomic classification.Name and taxonomic classification

[Ref.: #2861]	Domain	Bacteria
[Ref.: #2861]	Phylum	Aquificae
[Ref.: #2861]	Class	Aquificae
[Ref.: #2861]	Order	Aquificales
[Ref.: #2861]	Family	Aquificaceae
[Ref.: #2861]	Genus	Aquifex
[Ref.: #2861]	Species	Aquifex pyrophilus
[Ref.: #2861]	Full Scientific Name	Aquifex pyrophilus Huber and Stetter 1992
[Ref.: #2861]	Strain Designation	Kol5a
[Ref.: #2861]	Type strain

		Prokaryotic Nomenclature Up-to-date (PNU)	Taxonomical status	Literature reference
[Ref.: #20215]	Domain	Bacteria
[Ref.: #20215]	Phylum	Aquificae
[Ref.: #20215]	Class	Aquificae		Int. J. Syst. Evol. Microbiol. 52:685
[Ref.: #20215]	Family	Aquificaceae		Int. J. Syst. Evol. Microbiol. 52:685
[Ref.: #20215]	Genus	Aquifex	gen. nov. (VL)	Int. J. Syst. Bacteriol. 42:656
[Ref.: #20215]	Species	Aquifex pyrophilus	sp. nov. (VL)	Int. J. Syst. Bacteriol. 42:656
[Ref.: #20215]	Full Scientific Name	Aquifex pyrophilus Huber and Stetter 1992

Information on culture and growth conditionsCulture and growth conditions

[Ref.: #2861]

Culture medium

MODIFIED SME MEDIUM (DSMZ Medium 534), 85°C

[Ref.: #2861]

Culture medium growth

[Ref.: #2861]

Culture medium link

medium recipe provided by DSMZ

	Temperatures	Kind of temperature		Temperature
[Ref.: #2861]			growth	85 ̊C

[Ref.: #2861]

Temperature range

hyperthermophilic

Information on isolation source, the sampling and environmental conditionsIsolation, sampling and environmental information

[Ref.: #2861]

Sample type/isolated from

hot marine sediments

[Ref.: #2861]

Geographic location (country and/or sea, region)

Kolbeinsey Ridge north of Iceland

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Country

Iceland

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Continent

Europe

Isolation sources categories

#Environmental	#Aquatic	#Marine
#Environmental	#Aquatic	#Sediment
#Condition	#Thermophilic (>45°C)	-

What are isolation sources categories?

* marker position based on {}

Information on possible application of the strain and its possible interaction with e.g. potential hostsApplication and interaction

[Ref.: #2861]

Biosafety level

Risk group (German classification)

Information on genomic background e.g. entries in nucleic sequence databassMolecular biology

Sequence information:

Only first 5 entries are displayed. Click here to see all.

	Sequence database	Sequence accession description	Sequence accession number	Sequence length (bp)	Associated NCBI tax ID
[Ref.: #20218]	Marker Gene (EMBL Direct submission)	Aquifex pyrophilus 16S-23S rRNA intergenic spacer containing tRNA-Ile and tRNA-Ala genes, type strain DSM 6858T	AM259526	366	2714	*
[Ref.: #20218]	Marker Gene (EMBL Direct submission)	A.pyrophilus rpoB,rpoC,rpl12 genes for DNA-dependent RNA polymerase	X75046	9400	2714	*
[Ref.: #20218]	Marker Gene (EMBL Direct submission)	Aquifex pyrophilus 23S rRNA gene	Y15785	2986	2714	*
[Ref.: #20218]	Marker Gene (EMBL Direct submission)	Aquifex pyrophilus atp gene	Y15786	1437	2714	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Aquifex pyrophilus alanyl-tRNA synthetase (alaS) gene, complete cds; and ATP-dependent Clp protease regulatory subunit (clpA) gene, partial cds	AF027500	5292	2714	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Aquifex pyrophilus 50S ribosomal protein L1 (rplA) gene, partial cds; and 50S ribosomal protein L10 (rplJ) and 50S ribosomal protein L7/L12 (rplL) genes, complete cds	AF027501	1400	2714	*
[Ref.: #20218]	INSDC Sequence	Aquifex pyrophilus DNA repair protein (recA) gene, complete cds	L23135	1196	2714	*
[Ref.: #2861]	INSDC	Aquifex pyrophilus 16S ribosomal RNA gene, partial sequence	M83548	1564	2714

Availability in culture collectionsStrain availability

[Ref.: #2861]

Culture collection no.

DSM 6858, JCM 9492

[Ref.: #2861]

Strain history

<- K.O. Stetter, Kol5a

[Ref.: #20218]

Associated Passport(s) in StrainInfo

160357, 160358

References

#2861

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 6858

#20215

Leibniz Institute DSMZ D.Gleim, M.Kracht, N.Weiss et. al.: Prokaryotic Nomenclature Up-to-date - compilation of all names of Bacteria and Archaea, validly published according to the Bacteriological Code since 1. Jan. 1980, and validly published nomenclatural changes since .

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

* These References are textmined

Search for species Aquifex pyrophilus in external resources:
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