Desulfobacula phenolica PhO1 | Type strain | DSM 3384, ATCC 43956

Strain identifier

BacDive ID: 3978

Type strain:

Species: Desulfobacula phenolica

Strain Designation: PhO1

Section

Name and taxonomic classification
Morphology and physiology
Culture and growth conditions
Isolation, sampling and environmental information
Application and interaction
Molecular biology
Strain availability

External links

Information on the name and the taxonomic classification.Name and taxonomic classification

[Ref.: #1370]	Domain	Bacteria
[Ref.: #1370]	Phylum	Proteobacteria
[Ref.: #1370]	Class	Deltaproteobacteria
[Ref.: #1370]	Order	Desulfobacterales
[Ref.: #1370]	Family	Desulfobacteraceae
[Ref.: #1370]	Genus	Desulfobacula
[Ref.: #1370]	Species	Desulfobacula phenolica
[Ref.: #1370]	Full Scientific Name	Desulfobacula phenolica (Bak and Widdel 1988) Kuever et al. 2001
[Ref.: #1370]	Strain Designation	PhO1
[Ref.: #1370]	Type strain

		Prokaryotic Nomenclature Up-to-date (PNU)	Taxonomical status	Literature reference
[Ref.: #20215]	Domain	Bacteria
[Ref.: #20215]	Phylum	Proteobacteria
[Ref.: #20215]	Class	Deltaproteobacteria		Int. J. Syst. Evol. Microbiol. 56:1
[Ref.: #20215]	Family	Desulfobacteraceae
[Ref.: #20215]	Genus	Desulfobacula	gen. nov. (VL)	Int. J. Syst. Evol. Microbiol. 50:1415
[Ref.: #20215]	Species	Desulfobacula phenolica	comb. nov. (VP)	Int. J. Syst. Evol. Microbiol. 51:175*
[Ref.: #20215]	Full Scientific Name	Desulfobacula phenolica (Bak and Widdel 1988) Kuever et al. 2001

[Ref.: #20215]

Synonym

Desulfobacterium phenolicum

Information on morphological and physiological propertiesMorphology and physiology

[Ref.: #1370]

Incubation period

8-14 days

[Ref.: #1370]

Oxygen tolerance

anaerobe

Information on culture and growth conditionsCulture and growth conditions

[Ref.: #1370]

Culture medium

DESULFOBACTERIUM MEDIUM (DSMZ Medium 383), 28°C, with strain-specific modifications, anaerobic

[Ref.: #1370]

Culture medium growth

[Ref.: #1370]

Culture medium link

medium recipe provided by DSMZ

	Temperatures	Kind of temperature		Temperature
[Ref.: #1370]			growth	28 ̊C

[Ref.: #1370]

Temperature range

mesophilic

Information on isolation source, the sampling and environmental conditionsIsolation, sampling and environmental information

[Ref.: #1370]

Sample type/isolated from

marine mud

[Ref.: #1370]

Geographic location (country and/or sea, region)

Venice

[Ref.: #1370]

Country

Italy

[Ref.: #1370]

Continent

Europe

Isolation sources categories

#Environmental	#Aquatic	#Marine
#Environmental	#Aquatic	#Mud (Sludge)

What are isolation sources categories?

* marker position based on {}

Information on possible application of the strain and its possible interaction with e.g. potential hostsApplication and interaction

[Ref.: #1370]

Biosafety level

Risk group (German classification)

Information on genomic background e.g. entries in nucleic sequence databassMolecular biology

[Ref.: #1370]

GC-content

40.6 mol%

Sequence information:

	Sequence database	Sequence accession description	Sequence accession number	Sequence length (bp)	Associated NCBI tax ID
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Desulfobacula phenolica dissimilatory sulfite reductase alpha subunit (dsrA) and dissimilatory sulfite reductase beta subunit (dsrB) genes, partial cds	AF551758	1953	90732	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Desulfobacula phenolica strain DSM 3384 AprB (aprB) and AprA (aprA) genes, partial cds	EF442918	2202	90732	*
[Ref.: #1370]	EMBL Direct submission		AJ237606

Availability in culture collectionsStrain availability

[Ref.: #1370]

Culture collection no.

DSM 3384, ATCC 43956

[Ref.: #1370]

Strain history

<- F. Widdel <- F. Bak, PhO1

[Ref.: #20218]

Associated Passport(s) in StrainInfo

113367, 113366

References

#1370

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 3384

#20215

Leibniz Institute DSMZ D.Gleim, M.Kracht, N.Weiss et. al.: Prokaryotic Nomenclature Up-to-date - compilation of all names of Bacteria and Archaea, validly published according to the Bacteriological Code since 1. Jan. 1980, and validly published nomenclatural changes since .

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

* These References are textmined

Search for species Desulfobacula phenolica in external resources:
SILVA
BRENDA
PANGAEA
StrainInfo
GBIF