Carboxydothermus ferrireducens JW/AS-Y7 | Type strain | DSM 11255, VKM B-2392

Strain identifier

BacDive ID: 16807

Type strain:

Species: Carboxydothermus ferrireducens

Strain Designation: JW/AS-Y7

Culture col. no.: DSM 11255, VKM B-2392

Section

Name and taxonomic classification
Morphology and physiology
Culture and growth conditions
Isolation, sampling and environmental information
Application and interaction
Molecular biology
Strain availability

External links

Information on the name and the taxonomic classification.Name and taxonomic classification

[Ref.: #4262]	Domain	Bacteria
[Ref.: #4262]	Phylum	Firmicutes
[Ref.: #4262]	Class	Clostridia
[Ref.: #4262]	Order	Clostridiales
[Ref.: #4262]	Family	Thermoanaerobacteraceae
[Ref.: #4262]	Genus	Carboxydothermus
[Ref.: #4262]	Species	Carboxydothermus ferrireducens
[Ref.: #4262]	Full Scientific Name	Carboxydothermus ferrireducens (Slobodkin et al. 1997) Slobodkin et al. 2006
[Ref.: #4262]	Strain Designation	JW/AS-Y7
[Ref.: #4262]	Type strain

		Prokaryotic Nomenclature Up-to-date (PNU)	Taxonomical status	Literature reference
[Ref.: #20215]	Domain	Bacteria
[Ref.: #20215]	Phylum	Firmicutes
[Ref.: #20215]	Class	Clostridia		Int. J. Syst. Evol. Microbiol. 60:469
[Ref.: #20215]	Family	Thermoanaerobacteraceae		Int. J. Syst. Evol. Microbiol. 60:470
[Ref.: #20215]	Genus	Carboxydothermus	gen. nov. (VL)	Int. J. Syst. Bacteriol. 41:580
[Ref.: #20215]	Species	Carboxydothermus ferrireducens	comb. nov. (VP)	Int. J. Syst. Evol. Microbiol. 56:2350*
[Ref.: #20215]	Full Scientific Name	Carboxydothermus ferrireducens (Slobodkin et al. 1997) Slobodkin et al. 2006

[Ref.: #20215]

Synonym

Thermoterrabacterium ferrireducens

Information on morphological and physiological propertiesMorphology and physiology

[Ref.: #4262]

Oxygen tolerance

anaerobe

Information on culture and growth conditionsCulture and growth conditions

[Ref.: #4262]

Culture medium

THERMOTERRABACTERIUM MEDIUM (DSMZ Medium 778), 65°C, anaerobic

[Ref.: #4262]

Culture medium growth

[Ref.: #4262]

Culture medium link

medium recipe provided by DSMZ

	Temperatures	Kind of temperature		Temperature
[Ref.: #4262]			growth	65 ̊C

[Ref.: #4262]

Temperature range

thermophilic

Information on isolation source, the sampling and environmental conditionsIsolation, sampling and environmental information

[Ref.: #4262]

Sample type/isolated from

mixed sample of sediment, water and biomass of hot spring

[Ref.: #4262]

Geographic location (country and/or sea, region)

Yellowstone National Park, Calcite Spring area

[Ref.: #4262]

Country

USA

[Ref.: #4262]

Continent

North America

Isolation sources categories

#Environmental	#Aquatic	#Thermal spring
#Condition	#Thermophilic (>45°C)	-

What are isolation sources categories?

* marker position based on {}

Information on possible application of the strain and its possible interaction with e.g. potential hostsApplication and interaction

[Ref.: #4262]

Biosafety level

Risk group (German classification)

Information on genomic background e.g. entries in nucleic sequence databassMolecular biology

[Ref.: #4262]

GC-content

41.9 mol%

sequence analysis

Sequence information:

Only first 5 entries are displayed. Click here to see all.

	Sequence database	Sequence accession description	Sequence accession number	Sequence length (bp)	Associated NCBI tax ID
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Carboxydothermus ferrireducens DSM 11255 CarfeDRAFT_scaffold_0.1_C, whole genome shotgun sequence	ATYG01000001	257634	1119529	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Carboxydothermus ferrireducens DSM 11255 CarfeDRAFT_scaffold_1.2_C, whole genome shotgun sequence	ATYG01000002	150921	1119529	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Carboxydothermus ferrireducens DSM 11255 CarfeDRAFT_scaffold_2.3_C, whole genome shotgun sequence	ATYG01000003	132768	1119529	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Carboxydothermus ferrireducens DSM 11255 CarfeDRAFT_scaffold_3.4_C, whole genome shotgun sequence	ATYG01000004	115547	1119529	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Carboxydothermus ferrireducens DSM 11255 CarfeDRAFT_scaffold_4.5_C1, whole genome shotgun sequence	ATYG01000005	20815	1119529	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Carboxydothermus ferrireducens DSM 11255 CarfeDRAFT_scaffold_4.5_C2, whole genome shotgun sequence	ATYG01000006	91881	1119529	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Carboxydothermus ferrireducens DSM 11255 CarfeDRAFT_scaffold_5.6_C1, whole genome shotgun sequence	ATYG01000007	15103	1119529	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Carboxydothermus ferrireducens DSM 11255 CarfeDRAFT_scaffold_5.6_C2, whole genome shotgun sequence	ATYG01000008	86541	1119529	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Carboxydothermus ferrireducens DSM 11255 CarfeDRAFT_scaffold_6.7_C, whole genome shotgun sequence	ATYG01000009	89465	1119529	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Carboxydothermus ferrireducens DSM 11255 CarfeDRAFT_scaffold_7.8_C, whole genome shotgun sequence	ATYG01000010	83950	1119529	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Carboxydothermus ferrireducens DSM 11255 CarfeDRAFT_scaffold_8.9_C, whole genome shotgun sequence	ATYG01000011	82459	1119529	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Carboxydothermus ferrireducens DSM 11255 CarfeDRAFT_scaffold_9.10_C, whole genome shotgun sequence	ATYG01000012	78040	1119529	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Carboxydothermus ferrireducens DSM 11255 CarfeDRAFT_scaffold_10.11_C, whole genome shotgun sequence	ATYG01000013	75582	1119529	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Carboxydothermus ferrireducens DSM 11255 CarfeDRAFT_scaffold_11.12_C, whole genome shotgun sequence	ATYG01000014	74001	1119529	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Carboxydothermus ferrireducens DSM 11255 CarfeDRAFT_scaffold_12.13_C, whole genome shotgun sequence	ATYG01000015	73029	1119529	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Carboxydothermus ferrireducens DSM 11255 CarfeDRAFT_scaffold_13.14_C, whole genome shotgun sequence	ATYG01000016	71848	1119529	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Carboxydothermus ferrireducens DSM 11255 CarfeDRAFT_scaffold_14.15_C, whole genome shotgun sequence	ATYG01000017	64766	1119529	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Carboxydothermus ferrireducens DSM 11255 CarfeDRAFT_scaffold_15.16_C, whole genome shotgun sequence	ATYG01000018	64692	1119529	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Carboxydothermus ferrireducens DSM 11255 CarfeDRAFT_scaffold_16.17_C, whole genome shotgun sequence	ATYG01000019	64297	1119529	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Carboxydothermus ferrireducens DSM 11255 CarfeDRAFT_scaffold_17.18_C, whole genome shotgun sequence	ATYG01000020	63434	1119529	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Carboxydothermus ferrireducens DSM 11255 CarfeDRAFT_scaffold_18.19_C, whole genome shotgun sequence	ATYG01000021	61792	1119529	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Carboxydothermus ferrireducens DSM 11255 CarfeDRAFT_scaffold_19.20_C, whole genome shotgun sequence	ATYG01000022	61184	1119529	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Carboxydothermus ferrireducens DSM 11255 CarfeDRAFT_scaffold_20.21_C, whole genome shotgun sequence	ATYG01000023	55389	1119529	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Carboxydothermus ferrireducens DSM 11255 CarfeDRAFT_scaffold_21.22_C, whole genome shotgun sequence	ATYG01000024	51361	1119529	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Carboxydothermus ferrireducens DSM 11255 CarfeDRAFT_scaffold_22.23_C, whole genome shotgun sequence	ATYG01000025	40055	1119529	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Carboxydothermus ferrireducens DSM 11255 CarfeDRAFT_scaffold_23.24_C, whole genome shotgun sequence	ATYG01000026	36037	1119529	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Carboxydothermus ferrireducens DSM 11255 CarfeDRAFT_scaffold_24.25_C, whole genome shotgun sequence	ATYG01000027	32635	1119529	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Carboxydothermus ferrireducens DSM 11255 CarfeDRAFT_scaffold_25.26_C, whole genome shotgun sequence	ATYG01000028	28632	1119529	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Carboxydothermus ferrireducens DSM 11255 CarfeDRAFT_scaffold_26.27_C, whole genome shotgun sequence	ATYG01000029	28301	1119529	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Carboxydothermus ferrireducens DSM 11255 CarfeDRAFT_scaffold_27.28_C, whole genome shotgun sequence	ATYG01000030	26407	1119529	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Carboxydothermus ferrireducens DSM 11255 CarfeDRAFT_scaffold_28.29_C, whole genome shotgun sequence	ATYG01000031	25658	1119529	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Carboxydothermus ferrireducens DSM 11255 CarfeDRAFT_scaffold_29.30_C1, whole genome shotgun sequence	ATYG01000032	6098	1119529	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Carboxydothermus ferrireducens DSM 11255 CarfeDRAFT_scaffold_29.30_C2, whole genome shotgun sequence	ATYG01000033	18319	1119529	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Carboxydothermus ferrireducens DSM 11255 CarfeDRAFT_scaffold_30.31_C, whole genome shotgun sequence	ATYG01000034	21731	1119529	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Carboxydothermus ferrireducens DSM 11255 CarfeDRAFT_scaffold_31.32_C, whole genome shotgun sequence	ATYG01000035	20756	1119529	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Carboxydothermus ferrireducens DSM 11255 CarfeDRAFT_scaffold_32.33_C1, whole genome shotgun sequence	ATYG01000036	17969	1119529	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Carboxydothermus ferrireducens DSM 11255 CarfeDRAFT_scaffold_32.33_C2, whole genome shotgun sequence	ATYG01000037	1742	1119529	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Carboxydothermus ferrireducens DSM 11255 CarfeDRAFT_scaffold_33.34_C, whole genome shotgun sequence	ATYG01000038	19553	1119529	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Carboxydothermus ferrireducens DSM 11255 CarfeDRAFT_scaffold_34.35_C, whole genome shotgun sequence	ATYG01000039	15502	1119529	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Carboxydothermus ferrireducens DSM 11255 CarfeDRAFT_scaffold_35.36_C, whole genome shotgun sequence	ATYG01000040	14693	1119529	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Carboxydothermus ferrireducens DSM 11255 CarfeDRAFT_scaffold_36.37_C, whole genome shotgun sequence	ATYG01000041	14408	1119529	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Carboxydothermus ferrireducens DSM 11255 CarfeDRAFT_scaffold_37.38_C, whole genome shotgun sequence	ATYG01000042	14195	1119529	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Carboxydothermus ferrireducens DSM 11255 CarfeDRAFT_scaffold_38.39_C, whole genome shotgun sequence	ATYG01000043	12959	1119529	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Carboxydothermus ferrireducens DSM 11255 CarfeDRAFT_scaffold_39.40_C, whole genome shotgun sequence	ATYG01000044	10602	1119529	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Carboxydothermus ferrireducens DSM 11255 CarfeDRAFT_scaffold_40.41_C, whole genome shotgun sequence	ATYG01000045	9540	1119529	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Carboxydothermus ferrireducens DSM 11255 CarfeDRAFT_scaffold_41.42_C, whole genome shotgun sequence	ATYG01000046	9335	1119529	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Carboxydothermus ferrireducens DSM 11255 CarfeDRAFT_scaffold_42.43_C, whole genome shotgun sequence	ATYG01000047	8442	1119529	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Carboxydothermus ferrireducens DSM 11255 CarfeDRAFT_scaffold_43.44_C, whole genome shotgun sequence	ATYG01000048	7222	1119529	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Carboxydothermus ferrireducens DSM 11255 CarfeDRAFT_scaffold_44.45_C, whole genome shotgun sequence	ATYG01000049	5683	1119529	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Carboxydothermus ferrireducens DSM 11255 CarfeDRAFT_scaffold_45.46_C, whole genome shotgun sequence	ATYG01000050	3190	1119529	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Carboxydothermus ferrireducens DSM 11255 CarfeDRAFT_scaffold_46.47_C, whole genome shotgun sequence	ATYG01000051	1920	1119529	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Carboxydothermus ferrireducens DSM 11255 CarfeDRAFT_scaffold_47.48_C, whole genome shotgun sequence	ATYG01000052	1746	1119529	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Carboxydothermus ferrireducens DSM 11255 CarfeDRAFT_scaffold_48.49_C, whole genome shotgun sequence	ATYG01000053	1666	1119529	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Carboxydothermus ferrireducens strain JW/AS-Y7 16S small subunit ribosomal RNA gene, partial sequence	U76363	1503	54265	*
[Ref.: #4262]	INSDC	Carboxydothermus ferrireducens partial 16S rRNA gene, strain DSM 11255T, clone 1	LT547824	1562	54265
[Ref.: #4262]	INSDC (WGS)	Carboxydothermus ferrireducens DSM 11255, whole genome shotgun sequencing project	ATYG00000000	53	1119529
[Ref.: #4262]	INSDC	Carboxydothermus ferrireducens partial 16S rRNA gene, strain DSM 11255T, clone 2	LT547825	1562	54265
[Ref.: #4262]	INSDC	Carboxydothermus ferrireducens partial 16S rRNA gene, strain DSM 11255T, clone 4	LT547827	1533	54265
[Ref.: #4262]	INSDC	Carboxydothermus ferrireducens partial 16S rRNA gene, strain DSM 11255T, clone 3	LT547826	1534	54265

Availability in culture collectionsStrain availability

[Ref.: #4262]

Culture collection no.

DSM 11255, VKM B-2392

[Ref.: #4262]

Strain history

<- J. Wiegel, University of Georgia, Department of Microbiology, Athens, USA; JW/AS-Y7 <- A. Slobodkin {1996}

[Ref.: #20218]

Associated Passport(s) in StrainInfo

162560, 689612

References

#4262

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 11255

#20215

Leibniz Institute DSMZ D.Gleim, M.Kracht, N.Weiss et. al.: Prokaryotic Nomenclature Up-to-date - compilation of all names of Bacteria and Archaea, validly published according to the Bacteriological Code since 1. Jan. 1980, and validly published nomenclatural changes since .

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

* These References are textmined

Search for species Carboxydothermus ferrireducens in external resources:
SILVA
BRENDA
PANGAEA
StrainInfo
GBIF