Shimazuella kribbensis A9500 | Type strain | DSM 45090

Strain identifier

BacDive ID: 16785

Type strain:

Species: Shimazuella kribbensis

Strain Designation: A9500

Culture col. no.: DSM 45090

Section

Name and taxonomic classification
Culture and growth conditions
Isolation, sampling and environmental information
Application and interaction
Molecular biology
Strain availability

External links

Information on the name and the taxonomic classification.Name and taxonomic classification

[Ref.: #12332]	Domain	Bacteria
[Ref.: #12332]	Phylum	Firmicutes
[Ref.: #12332]	Class	Bacilli
[Ref.: #12332]	Order	Bacillales
[Ref.: #12332]	Family	Thermoactinomycetaceae
[Ref.: #12332]	Genus	Shimazuella
[Ref.: #12332]	Species	Shimazuella kribbensis
[Ref.: #12332]	Full Scientific Name	Shimazuella kribbensis Park et al. 2007
[Ref.: #12332]	Strain Designation	A9500
[Ref.: #12332]	Type strain

		Prokaryotic Nomenclature Up-to-date (PNU)	Taxonomical status	Literature reference
[Ref.: #20215]	Domain	Bacteria
[Ref.: #20215]	Phylum	Firmicutes
[Ref.: #20215]	Class	Bacilli		Int. J. Syst. Evol. Microbiol. 60:469
[Ref.: #20215]	Family	Thermoactinomycetaceae		Int. J. Syst. Evol. Microbiol. 56:2840*
[Ref.: #20215]	Genus	Shimazuella	gen. nov. (VP)	Int. J. Syst. Evol. Microbiol. 57:2663*
[Ref.: #20215]	Species	Shimazuella kribbensis	sp. nov. (VP)	Int. J. Syst. Evol. Microbiol. 57:2663*
[Ref.: #20215]	Full Scientific Name	Shimazuella kribbensis Park et al. 2007

[Ref.: #20215]

Synonym

Seinonella kribbensis

Information on culture and growth conditionsCulture and growth conditions

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Culture medium

GYM STREPTOMYCES MEDIUM (DSMZ Medium 65), 28°C

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Culture medium growth

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Culture medium link

medium recipe provided by DSMZ

	Temperatures	Kind of temperature		Temperature
[Ref.: #12332]			growth	28 ̊C

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Temperature range

mesophilic

Information on isolation source, the sampling and environmental conditionsIsolation, sampling and environmental information

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Sample type/isolated from

forest soil

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Geographic location (country and/or sea, region)

Sobaek Mountain

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Country

Republic of Korea

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Continent

Asia

Isolation sources categories

#Environmental	#Terrestrial	#Forest
#Environmental	#Terrestrial	#Soil

What are isolation sources categories?

* marker position based on {}

Information on possible application of the strain and its possible interaction with e.g. potential hostsApplication and interaction

[Ref.: #12332]

Biosafety level

Risk group (German classification)

Information on genomic background e.g. entries in nucleic sequence databassMolecular biology

Sequence information:

Only first 5 entries are displayed. Click here to see all.

	Sequence database	Sequence accession description	Sequence accession number	Sequence length (bp)	Associated NCBI tax ID
[Ref.: #12332]	DDBJ EMBL Direct submission		AB049939
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Shimazuella kribbensis DSM 45090 A3GQDRAFT_scaffold_0.1_C, whole genome shotgun sequence	ATZF01000001	606309	1123252	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Shimazuella kribbensis DSM 45090 A3GQDRAFT_scaffold_1.2_C, whole genome shotgun sequence	ATZF01000002	479687	1123252	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Shimazuella kribbensis DSM 45090 A3GQDRAFT_scaffold_2.3_C, whole genome shotgun sequence	ATZF01000003	299129	1123252	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Shimazuella kribbensis DSM 45090 A3GQDRAFT_scaffold_3.4_C, whole genome shotgun sequence	ATZF01000004	278619	1123252	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Shimazuella kribbensis DSM 45090 A3GQDRAFT_scaffold_4.5_C, whole genome shotgun sequence	ATZF01000005	259579	1123252	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Shimazuella kribbensis DSM 45090 A3GQDRAFT_scaffold_5.6_C, whole genome shotgun sequence	ATZF01000006	244454	1123252	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Shimazuella kribbensis DSM 45090 A3GQDRAFT_scaffold_6.7_C, whole genome shotgun sequence	ATZF01000007	240538	1123252	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Shimazuella kribbensis DSM 45090 A3GQDRAFT_scaffold_7.8_C1, whole genome shotgun sequence	ATZF01000008	68289	1123252	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Shimazuella kribbensis DSM 45090 A3GQDRAFT_scaffold_7.8_C2, whole genome shotgun sequence	ATZF01000009	141462	1123252	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Shimazuella kribbensis DSM 45090 A3GQDRAFT_scaffold_8.9_C, whole genome shotgun sequence	ATZF01000010	189537	1123252	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Shimazuella kribbensis DSM 45090 A3GQDRAFT_scaffold_9.10_C, whole genome shotgun sequence	ATZF01000011	184461	1123252	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Shimazuella kribbensis DSM 45090 A3GQDRAFT_scaffold_10.11_C, whole genome shotgun sequence	ATZF01000012	174397	1123252	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Shimazuella kribbensis DSM 45090 A3GQDRAFT_scaffold_11.12_C, whole genome shotgun sequence	ATZF01000013	166479	1123252	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Shimazuella kribbensis DSM 45090 A3GQDRAFT_scaffold_12.13_C, whole genome shotgun sequence	ATZF01000014	123651	1123252	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Shimazuella kribbensis DSM 45090 A3GQDRAFT_scaffold_13.14_C, whole genome shotgun sequence	ATZF01000015	116703	1123252	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Shimazuella kribbensis DSM 45090 A3GQDRAFT_scaffold_14.15_C, whole genome shotgun sequence	ATZF01000016	88697	1123252	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Shimazuella kribbensis DSM 45090 A3GQDRAFT_scaffold_15.16_C, whole genome shotgun sequence	ATZF01000017	84327	1123252	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Shimazuella kribbensis DSM 45090 A3GQDRAFT_scaffold_16.17_C1, whole genome shotgun sequence	ATZF01000018	29792	1123252	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Shimazuella kribbensis DSM 45090 A3GQDRAFT_scaffold_16.17_C2, whole genome shotgun sequence	ATZF01000019	48730	1123252	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Shimazuella kribbensis DSM 45090 A3GQDRAFT_scaffold_17.18_C, whole genome shotgun sequence	ATZF01000020	41209	1123252	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Shimazuella kribbensis DSM 45090 A3GQDRAFT_scaffold_18.19_C, whole genome shotgun sequence	ATZF01000021	40940	1123252	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Shimazuella kribbensis DSM 45090 A3GQDRAFT_scaffold_19.20_C, whole genome shotgun sequence	ATZF01000022	28099	1123252	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Shimazuella kribbensis DSM 45090 A3GQDRAFT_scaffold_20.21_C, whole genome shotgun sequence	ATZF01000023	28067	1123252	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Shimazuella kribbensis DSM 45090 A3GQDRAFT_scaffold_21.22_C, whole genome shotgun sequence	ATZF01000024	25424	1123252	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Shimazuella kribbensis DSM 45090 A3GQDRAFT_scaffold_22.23_C, whole genome shotgun sequence	ATZF01000025	19820	1123252	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Shimazuella kribbensis DSM 45090 A3GQDRAFT_scaffold_23.24_C, whole genome shotgun sequence	ATZF01000026	19391	1123252	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Shimazuella kribbensis DSM 45090 A3GQDRAFT_scaffold_24.25_C1, whole genome shotgun sequence	ATZF01000027	17744	1123252	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Shimazuella kribbensis DSM 45090 A3GQDRAFT_scaffold_24.25_C2, whole genome shotgun sequence	ATZF01000028	407	1123252	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Shimazuella kribbensis DSM 45090 A3GQDRAFT_scaffold_25.26_C, whole genome shotgun sequence	ATZF01000029	15077	1123252	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Shimazuella kribbensis DSM 45090 A3GQDRAFT_scaffold_26.27_C, whole genome shotgun sequence	ATZF01000030	13165	1123252	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Shimazuella kribbensis DSM 45090 A3GQDRAFT_scaffold_27.28_C, whole genome shotgun sequence	ATZF01000031	13121	1123252	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Shimazuella kribbensis DSM 45090 A3GQDRAFT_scaffold_28.29_C1, whole genome shotgun sequence	ATZF01000032	1444	1123252	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Shimazuella kribbensis DSM 45090 A3GQDRAFT_scaffold_28.29_C2, whole genome shotgun sequence	ATZF01000033	10913	1123252	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Shimazuella kribbensis DSM 45090 A3GQDRAFT_scaffold_29.30_C, whole genome shotgun sequence	ATZF01000034	12640	1123252	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Shimazuella kribbensis DSM 45090 A3GQDRAFT_scaffold_30.31_C, whole genome shotgun sequence	ATZF01000035	9183	1123252	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Shimazuella kribbensis DSM 45090 A3GQDRAFT_scaffold_31.32_C, whole genome shotgun sequence	ATZF01000036	8909	1123252	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Shimazuella kribbensis DSM 45090 A3GQDRAFT_scaffold_32.33_C, whole genome shotgun sequence	ATZF01000037	8537	1123252	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Shimazuella kribbensis DSM 45090 A3GQDRAFT_scaffold_33.34_C, whole genome shotgun sequence	ATZF01000038	7435	1123252	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Shimazuella kribbensis DSM 45090 A3GQDRAFT_scaffold_34.35_C, whole genome shotgun sequence	ATZF01000039	7143	1123252	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Shimazuella kribbensis DSM 45090 A3GQDRAFT_scaffold_35.36_C, whole genome shotgun sequence	ATZF01000040	7024	1123252	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Shimazuella kribbensis DSM 45090 A3GQDRAFT_scaffold_36.37_C, whole genome shotgun sequence	ATZF01000041	5216	1123252	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Shimazuella kribbensis DSM 45090 A3GQDRAFT_scaffold_37.38_C, whole genome shotgun sequence	ATZF01000042	5159	1123252	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Shimazuella kribbensis DSM 45090 A3GQDRAFT_scaffold_38.39_C, whole genome shotgun sequence	ATZF01000043	2865	1123252	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Shimazuella kribbensis DSM 45090 A3GQDRAFT_scaffold_39.40_C, whole genome shotgun sequence	ATZF01000044	2647	1123252	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Shimazuella kribbensis DSM 45090 A3GQDRAFT_scaffold_40.41_C, whole genome shotgun sequence	ATZF01000045	1725	1123252	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Shimazuella kribbensis DSM 45090 A3GQDRAFT_scaffold_41.42_C, whole genome shotgun sequence	ATZF01000046	1013	1123252	*

Availability in culture collectionsStrain availability

[Ref.: #12332]

Culture collection no.

DSM 45090

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Strain history

<- C.-J. Kim, KRIBB; A9500 <- D.-J. Park

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Associated Passport(s) in StrainInfo

756865

References

#12332

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 45090

#20215

Leibniz Institute DSMZ D.Gleim, M.Kracht, N.Weiss et. al.: Prokaryotic Nomenclature Up-to-date - compilation of all names of Bacteria and Archaea, validly published according to the Bacteriological Code since 1. Jan. 1980, and validly published nomenclatural changes since .

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

* These References are textmined

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