Streptomyces kasugaensis BL904, M338-M1 | Type strain | DSM 40819, ATCC 15714, IFO 13851, JCM 4208, KCC S-0208, NBRC 13851

Strain identifier

BacDive ID: 15338

Type strain:

Species: Streptomyces kasugaensis

Strain Designation: BL904, M338-M1

Culture col. no.: DSM 40819, ATCC 15714, IFO 13851, JCM 4208, KCC S-0208, NBRC 13851

Section

Name and taxonomic classification
Morphology and physiology
Culture and growth conditions
Isolation, sampling and environmental information
Application and interaction
Molecular biology
Strain availability

External links

Information on the name and the taxonomic classification.Name and taxonomic classification

[Ref.: #9823]	Domain	Bacteria
[Ref.: #9823]	Phylum	Actinobacteria
[Ref.: #9823]	Class	Actinobacteria
[Ref.: #9823]	Order	Actinomycetales
[Ref.: #9823]	Family	Streptomycetaceae
[Ref.: #9823]	Genus	Streptomyces
[Ref.: #9823]	Species	Streptomyces kasugaensis
[Ref.: #9823]	Full Scientific Name	Streptomyces kasugaensis Hamada et al. 1995
[Ref.: #9823]	Strain Designation	BL904, M338-M1
[Ref.: #9823]	Type strain

		Prokaryotic Nomenclature Up-to-date (PNU)	Taxonomical status	Literature reference
[Ref.: #20215]	Domain	Bacteria
[Ref.: #20215]	Phylum	Actinobacteria
[Ref.: #20215]	Class	Actinobacteria		Int. J. Syst. Bacteriol. 47:483*
[Ref.: #20215]	Family	Streptomycetaceae
[Ref.: #20215]	Genus	Streptomyces	genus (AL)	Int. J. Syst. Bacteriol. 30:368 (AL)
[Ref.: #20215]	Species	Streptomyces kasugaensis	sp. nov. (VL)	Int. J. Syst. Bacteriol. 45:880
[Ref.: #20215]	Full Scientific Name	Streptomyces kasugaensis Hamada et al. 1995

Information on morphological and physiological propertiesMorphology and physiology

[Ref.: #18675]	Colony color	Brown beige (1011)
[Ref.: #18675]	Incubation period	10-14 days
[Ref.: #18675]	Cultivation medium used	ISP 2

[Ref.: #18675]	Colony color	Broom yellow (1032)
[Ref.: #18675]	Incubation period	10-14 days
[Ref.: #18675]	Cultivation medium used	ISP 3

[Ref.: #18675]	Colony color	Colorless
[Ref.: #18675]	Incubation period	10-14 days
[Ref.: #18675]	Cultivation medium used	ISP 4

[Ref.: #18675]	Colony color	Colorless
[Ref.: #18675]	Incubation period	10-14 days
[Ref.: #18675]	Cultivation medium used	ISP 5

[Ref.: #18675]	Colony color	Beige (1001)
[Ref.: #18675]	Incubation period	10-14 days
[Ref.: #18675]	Cultivation medium used	ISP 6

[Ref.: #18675]	Colony color	Brown beige (1011)
[Ref.: #18675]	Incubation period	10-14 days
[Ref.: #18675]	Cultivation medium used	ISP 7

[Ref.: #9823]	Name of produced compound	kasugamycin
[Ref.: #9823]	Name of produced compound	thiolutin
[Ref.: #18675]	Name of produced compound	Kasugamycin

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #18675]		NaCl		maximum	2.5	%

API® 20E:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	beta-GalactosidaseONPG	Arginine dihydrolaseADH (Arg)	Lysine decarboxylaseLDC (Lys)	Ornithine decarboxylaseODC	Citrate utilizationCIT	H2S productionH2S	Urease/urea hydrolysisURE	Tryptophan deaminaseTDA (Trp)	Indole productionIND	Acetoin production (Voges Proskauer test)VP	Gelatinase/gelatin hydrolysisGEL	Fermentation/oxidation of D-glucoseGLU	Fermentation/oxidation of D-mannitolMAN	Fermentation/oxidation of inositolINO	Fermentation/oxidation of sorbitolSor	Fermentation/oxidation of L-rhamnoseRHA	Fermentation/oxidation of sucroseSAC	Fermentation/oxidation of melibioseMEL	Fermentation/oxidation of amygdalinAMY	Fermentation/oxidation of L-arabinoseARA	Cytochrome oxidaseOX	Nitrite productionNO2	Reduction to N2N2	MotilityMOB	Growth on MacConkey mediumMAC	Oxidative catabolisation of D-glucoseOF-O	Fermentation of D-glucoseOF-F
[Ref.: #18675]	185	-	+	+	+	+	-	+	-	-	-	-	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #18675]	277	not determinedn.d.	+	-	+	-	+	+	-	-	-	+	+	-	+	-	+	-	+	+	-

	Metabolite	Utilization activity
[Ref.: #18675]	Arabinose	+
[Ref.: #18675]	Cellulose	-
[Ref.: #18675]	Fructose	-
[Ref.: #18675]	Glucose	+
[Ref.: #18675]	Inositol	+
[Ref.: #18675]	Mannitol	-
[Ref.: #18675]	Raffinose	-
[Ref.: #18675]	Rhamnose	-
[Ref.: #18675]	Sucrose	+
[Ref.: #18675]	Xylose	-

[Ref.: #18675]	Multicellular complex forming ability	no
[Ref.: #18675]	Medium Name (multicellularity)	ISP 2

[Ref.: #18675]	Multicellular complex forming ability	no
[Ref.: #18675]	Medium Name (multicellularity)	ISP 3

[Ref.: #18675]	Multicellular complex forming ability	no
[Ref.: #18675]	Medium Name (multicellularity)	ISP 4

[Ref.: #18675]	Multicellular complex forming ability	no
[Ref.: #18675]	Medium Name (multicellularity)	ISP 5

[Ref.: #18675]	Multicellular complex forming ability	no
[Ref.: #18675]	Medium Name (multicellularity)	ISP 6

[Ref.: #18675]	Multicellular complex forming ability	no
[Ref.: #18675]	Medium Name (multicellularity)	ISP 7

[Ref.: #18675]

Ability of spore formation

Information on culture and growth conditionsCulture and growth conditions

[Ref.: #9823]

Culture medium

GYM STREPTOMYCES MEDIUM (DSMZ Medium 65), 28°C

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Culture medium growth

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Culture medium link

medium recipe provided by DSMZ

[Ref.: #18675]

Culture medium

ISP 2

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Culture medium growth

[Ref.: #18675]

Culture medium composition

expand / minimize

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Culture medium

ISP 3

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Culture medium growth

[Ref.: #18675]

Culture medium composition

expand / minimize

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Culture medium

ISP 4

[Ref.: #18675]

Culture medium growth

[Ref.: #18675]

Culture medium composition

expand / minimize

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Culture medium

ISP 5

[Ref.: #18675]

Culture medium growth

[Ref.: #18675]

Culture medium composition

expand / minimize

[Ref.: #18675]

Culture medium

ISP 6

[Ref.: #18675]

Culture medium growth

[Ref.: #18675]

Culture medium composition

expand / minimize

[Ref.: #18675]

Culture medium

ISP 7

[Ref.: #18675]

Culture medium growth

[Ref.: #18675]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #9823]			growth	28 ̊C

[Ref.: #9823]

Temperature range

mesophilic

Information on isolation source, the sampling and environmental conditionsIsolation, sampling and environmental information

[Ref.: #9823]

Sample type/isolated from

soil

[Ref.: #9823]

Geographic location (country and/or sea, region)

Nara, Nara City, Kasuga shrine

[Ref.: #9823]

Country

Japan

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Continent

Asia

Isolation sources categories

#Environmental

#Terrestrial

#Soil

What are isolation sources categories?

* marker position based on {}

Information on possible application of the strain and its possible interaction with e.g. potential hostsApplication and interaction

[Ref.: #18675]	Biosafety level	1	German classification
[Ref.: #9823]	Biosafety level	1	Risk group (German classification)

Information on genomic background e.g. entries in nucleic sequence databassMolecular biology

[Ref.: #9823]

GC-content

70.4-70.9 mol%

Sequence information:

Only first 5 entries are displayed. Click here to see all.

	Sequence database	Sequence accession description	Sequence accession number	Sequence length (bp)	Associated NCBI tax ID
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Streptomyces kasugaensis strain DSM 40819 ATP synthase beta subunit (atpD) gene, partial cds	FJ406170	495	1946	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Streptomyces kasugaensis strain DSM 40819 gyrase B (gyrB) gene, partial cds	FJ406226	498	1946	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Streptomyces kasugaensis strain DSM 40819 recombinase A (recA) gene, partial cds	FJ406282	504	1946	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Streptomyces kasugaensis strain DSM 40819 tryptophan synthase beta subunit (trpB) gene, partial cds	FJ406393	567	1946	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Streptomyces kasugaensis RNA polymerase gene, partial cds	AY520429	279	1946	*
[Ref.: #20218]	Marker Gene (DDBJ Direct submission)	Streptomyces kasugaensis DNA, kasugamycin biosynthesis responsible gene region, partial and complete cds	AB005901	7581	1946	*
[Ref.: #20218]	Marker Gene (DDBJ Direct submission)	Streptomyces kasugaensis DNA for 16S ribosomal RNA, strain M338-M1, partial sequence	AB024441	1488	1946	*
[Ref.: #20218]	Marker Gene (DDBJ Direct submission)	Streptomyces kasugaensis ORFJ, kasK, kasL, kasM genes for hypothetical protein, ATP-binding protein, membrane protein, membrane protein, partial and complete cds	AB033992	4236	1946	*
[Ref.: #20218]	Marker Gene (DDBJ Direct submission)	Streptomyces kasugaensis kasN, kasO, kasP, kasQ, kasR, kasA genes, partial and complete cds, strain:M338-M1	AB120043	6860	1946	*
[Ref.: #20218]	Marker Gene (DDBJ Direct submission)	Streptomyces kasugaensis kasW, kasX, kasV, kasS genes for putative response regulator, putative histidine sensor kinase, regulatory protein, putative membrane protein, complete cds, strain: M338-M1	AB303690	5046	1946	*
[Ref.: #20218]	Marker Gene (DDBJ Direct submission)	Streptomyces kasugaensis gene for 16S rRNA, partial sequence, strain: NBRC 13851	AB184530	1476	1946	*
[Ref.: #20218]	Marker Gene (DDBJ Direct submission)	Streptomyces kasugaensis gene for non-ribosomal peptide synthetase, partial cds, strain: NBRC 13851, clone: UN1	AB432514	637	1946	*
[Ref.: #20218]	Marker Gene (DDBJ Direct submission)	Streptomyces kasugaensis gene for non-ribosomal peptide synthetase, partial cds, strain: NBRC 13851, clone: N2	AB432515	742	1946	*
[Ref.: #20218]	Marker Gene (DDBJ Direct submission)	Streptomyces kasugaensis gene for non-ribosomal peptide synthetase, partial cds, strain: NBRC 13851, clone: UN6	AB432516	721	1946	*

Availability in culture collectionsStrain availability

[Ref.: #9823]

Culture collection no.

DSM 40819, ATCC 15714, IFO 13851, JCM 4208, KCC S-0208, NBRC 13851

[Ref.: #9823]

Strain history

<- H.D. Tresner, BL904 (Streptomyces kasugaensis) <- Bristol Labs, M-338-M1 <- H. Umezawa, A-9989-A

[Ref.: #20218]

Associated Passport(s) in StrainInfo

166287, 98575, 166288, 166289, 166290, 334226

References

#9823

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 40819

#18675

Wink, J.: Compendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig .

#20215

Leibniz Institute DSMZ D.Gleim, M.Kracht, N.Weiss et. al.: Prokaryotic Nomenclature Up-to-date - compilation of all names of Bacteria and Archaea, validly published according to the Bacteriological Code since 1. Jan. 1980, and validly published nomenclatural changes since .

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

* These References are textmined

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