Streptomyces calvus T-3018 | Type strain | DSM 40010, ATCC 13382, ATCC 23890, CBS 676.68, IFO 13200, ISP 5010, JCM 4326, JCM 4628, NBRC 13200, RIA 1103

Strain identifier

BacDive ID: 15063

Type strain:

Species: Streptomyces calvus

Strain Designation: T-3018

Culture col. no.: DSM 40010, ATCC 13382, ATCC 23890, CBS 676.68, IFO 13200, ISP 5010, JCM 4326, JCM 4628, NBRC 13200, RIA 1103

Section

Name and taxonomic classification
Morphology and physiology
Culture and growth conditions
Application and interaction
Molecular biology
Strain availability

External links

Information on the name and the taxonomic classification.Name and taxonomic classification

[Ref.: #9212]	Domain	Bacteria
[Ref.: #9212]	Phylum	Actinobacteria
[Ref.: #9212]	Class	Actinobacteria
[Ref.: #9212]	Order	Actinomycetales
[Ref.: #9212]	Family	Streptomycetaceae
[Ref.: #9212]	Genus	Streptomyces
[Ref.: #9212]	Species	Streptomyces calvus
[Ref.: #9212]	Full Scientific Name	Streptomyces calvus Backus et al. 1957
[Ref.: #9212]	Strain Designation	T-3018
[Ref.: #9212]	Type strain

		Prokaryotic Nomenclature Up-to-date (PNU)	Taxonomical status	Literature reference
[Ref.: #20215]	Domain	Bacteria
[Ref.: #20215]	Phylum	Actinobacteria
[Ref.: #20215]	Class	Actinobacteria		Int. J. Syst. Bacteriol. 47:483*
[Ref.: #20215]	Family	Streptomycetaceae
[Ref.: #20215]	Genus	Streptomyces	genus (AL)	Int. J. Syst. Bacteriol. 30:368 (AL)
[Ref.: #20215]	Species	Streptomyces calvus	species (AL)	Int. J. Syst. Bacteriol. 30:375 (AL)
[Ref.: #20215]	Full Scientific Name	Streptomyces calvus Backus et al. 1957

Information on morphological and physiological propertiesMorphology and physiology

[Ref.: #19385]	Colony color	Black grey
[Ref.: #19385]	Incubation period	10-14 days
[Ref.: #19385]	Cultivation medium used	ISP 2

[Ref.: #19385]	Colony color	Beige
[Ref.: #19385]	Incubation period	10-14 days
[Ref.: #19385]	Cultivation medium used	ISP 3

[Ref.: #19385]	Colony color	Black grey
[Ref.: #19385]	Incubation period	10-14 days
[Ref.: #19385]	Cultivation medium used	ISP 4

[Ref.: #19385]	Colony color	Beige
[Ref.: #19385]	Incubation period	10-14 days
[Ref.: #19385]	Cultivation medium used	ISP 5

[Ref.: #19385]	Colony color	Beige
[Ref.: #19385]	Incubation period	10-14 days
[Ref.: #19385]	Cultivation medium used	ISP 6

[Ref.: #19385]	Colony color	Brown beige
[Ref.: #19385]	Incubation period	10-14 days
[Ref.: #19385]	Cultivation medium used	ISP 7

[Ref.: #9212]

Name of produced compound

nucleocidin

API® 20E:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	beta-GalactosidaseONPG	Arginine dihydrolaseADH (Arg)	Lysine decarboxylaseLDC (Lys)	Ornithine decarboxylaseODC	Citrate utilizationCIT	H2S productionH2S	Urease/urea hydrolysisURE	Tryptophan deaminaseTDA (Trp)	Indole productionIND	Acetoin production (Voges Proskauer test)VP	Gelatinase/gelatin hydrolysisGEL	Fermentation/oxidation of D-glucoseGLU	Fermentation/oxidation of D-mannitolMAN	Fermentation/oxidation of inositolINO	Fermentation/oxidation of sorbitolSor	Fermentation/oxidation of L-rhamnoseRHA	Fermentation/oxidation of sucroseSAC	Fermentation/oxidation of melibioseMEL	Fermentation/oxidation of amygdalinAMY	Fermentation/oxidation of L-arabinoseARA	Cytochrome oxidaseOX	Nitrite productionNO2	Reduction to N2N2	MotilityMOB	Growth on MacConkey mediumMAC	Oxidative catabolisation of D-glucoseOF-O	Fermentation of D-glucoseOF-F
[Ref.: #19385]	251	+	+	+	+	+	-	+	-	-	-	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #19385]	340	not determinedn.d.	+	+	+	+	+	+	+	+	-	+	+	+	+	-	+	+	+	+	-

	Metabolite	Utilization activity
[Ref.: #19385]	Arabinose	+
[Ref.: #19385]	Cellulose	+
[Ref.: #19385]	Fructose	+
[Ref.: #19385]	Glucose	+
[Ref.: #19385]	Inositol	+
[Ref.: #19385]	Mannitol	+
[Ref.: #19385]	Raffinose	+
[Ref.: #19385]	Rhamnose	-
[Ref.: #19385]	Sucrose	+
[Ref.: #19385]	Xylose	-

[Ref.: #19385]	Multicellular complex forming ability	no
[Ref.: #19385]	Medium Name (multicellularity)	ISP 2

[Ref.: #19385]	Multicellular complex forming ability	no
[Ref.: #19385]	Medium Name (multicellularity)	ISP 3

[Ref.: #19385]	Multicellular complex forming ability	no
[Ref.: #19385]	Medium Name (multicellularity)	ISP 4

[Ref.: #19385]	Multicellular complex forming ability	no
[Ref.: #19385]	Medium Name (multicellularity)	ISP 5

[Ref.: #19385]	Multicellular complex forming ability	no
[Ref.: #19385]	Medium Name (multicellularity)	ISP 6

[Ref.: #19385]	Multicellular complex forming ability	no
[Ref.: #19385]	Medium Name (multicellularity)	ISP 7

Information on culture and growth conditionsCulture and growth conditions

[Ref.: #9212]

Culture medium

GYM STREPTOMYCES MEDIUM (DSMZ Medium 65), 28°C

[Ref.: #9212]

Culture medium growth

[Ref.: #9212]

Culture medium link

medium recipe provided by DSMZ

[Ref.: #19385]

Culture medium

ISP 2

[Ref.: #19385]

Culture medium growth

[Ref.: #19385]

Culture medium composition

expand / minimize

[Ref.: #19385]

Culture medium

ISP 3

[Ref.: #19385]

Culture medium growth

[Ref.: #19385]

Culture medium composition

expand / minimize

[Ref.: #19385]

Culture medium

ISP 4

[Ref.: #19385]

Culture medium growth

[Ref.: #19385]

Culture medium composition

expand / minimize

[Ref.: #19385]

Culture medium

ISP 5

[Ref.: #19385]

Culture medium growth

[Ref.: #19385]

Culture medium composition

expand / minimize

[Ref.: #19385]

Culture medium

ISP 6

[Ref.: #19385]

Culture medium growth

[Ref.: #19385]

Culture medium composition

expand / minimize

[Ref.: #19385]

Culture medium

ISP 7

[Ref.: #19385]

Culture medium growth

[Ref.: #19385]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #9212]			growth	28 ̊C
[Ref.: #19385]			optimum	28 ̊C

[Ref.: #9212]	Temperature range	mesophilic
[Ref.: #19385]	Temperature range	mesophilic

Information on possible application of the strain and its possible interaction with e.g. potential hostsApplication and interaction

[Ref.: #9212]	Biosafety level	1	Risk group (German classification)
[Ref.: #19385]	Biosafety level	1	Risk group (German classification)

Information on genomic background e.g. entries in nucleic sequence databassMolecular biology

Sequence information:

	Sequence database	Sequence accession description	Sequence accession number	Sequence length (bp)	Associated NCBI tax ID
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Streptomyces calvus strain ATCC 13382 phosphohistidine phosphatase, hypothetical protein, Ann1, Ann2, Ann3, Ann4, Ann5, multidrug MFS transporter, and ATP-dependent DNA helicase genes, complete cds	KF683117	41001	67282	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Streptomyces calvus strain ISP 5010 16S ribosomal RNA gene, partial sequence	AY999780	1495	67282	*
[Ref.: #20218]	Marker Gene (DDBJ Direct submission)	Streptomyces calvus gene for 16S ribosomal RNA, partial sequence, strain: JCM 4628	D44275	121	67282	*
[Ref.: #20218]	Marker Gene (DDBJ Direct submission)	Streptomyces calvus gene for 16S rRNA, partial sequence, strain: NBRC 13200	AB184329	1474	67282	*

Availability in culture collectionsStrain availability

[Ref.: #9212]

Culture collection no.

DSM 40010, ATCC 13382, ATCC 23890, CBS 676.68, IFO 13200, ISP 5010, JCM 4326, JCM 4628, NBRC 13200, RIA 1103

[Ref.: #9212]

Strain history

<- E.B. Shirling, ISP <- H. Tresner, Lederle Labs, T-3018

[Ref.: #20218]

Associated Passport(s) in StrainInfo

164444, 122584, 122586, 228040, 122589, 122590, 164446, 164447, 334334, 122593

References

#9212

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 40010

#19385

Wink, J.: Compendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig .

#20215

Leibniz Institute DSMZ D.Gleim, M.Kracht, N.Weiss et. al.: Prokaryotic Nomenclature Up-to-date - compilation of all names of Bacteria and Archaea, validly published according to the Bacteriological Code since 1. Jan. 1980, and validly published nomenclatural changes since .

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

* These References are textmined

Search for species Streptomyces calvus in external resources:
SILVA
BRENDA
PANGAEA
StrainInfo
GBIF