Bhargavaea cecembensis DSE10 | Type strain | DSM 22132, JCM 14375, LMG 24411

Strain identifier

BacDive ID: 12011

Type strain:

Species: Bhargavaea cecembensis

Strain Designation: DSE10

Culture col. no.: DSM 22132, JCM 14375, LMG 24411

Section

Name and taxonomic classification
Morphology and physiology
Culture and growth conditions
Isolation, sampling and environmental information
Application and interaction
Molecular biology
Strain availability

External links

Information on the name and the taxonomic classification.Name and taxonomic classification

[Ref.: #16151]	Domain	Bacteria
[Ref.: #16151]	Phylum	Firmicutes
[Ref.: #16151]	Class	Bacilli
[Ref.: #16151]	Order	Bacillales
[Ref.: #16151]	Family	Planococcaceae
[Ref.: #16151]	Genus	Bhargavaea
[Ref.: #16151]	Species	Bhargavaea cecembensis
[Ref.: #16151]	Full Scientific Name	Bhargavaea cecembensis Manorama et al. 2009 emend. Verma et al. 2012
[Ref.: #16151]	Strain Designation	DSE10
[Ref.: #16151]	Type strain

		Prokaryotic Nomenclature Up-to-date (PNU)	Taxonomical status	Literature reference
[Ref.: #20215]	Domain	Bacteria
[Ref.: #20215]	Phylum	Firmicutes
[Ref.: #20215]	Class	Bacilli		Int. J. Syst. Evol. Microbiol. 60:469
[Ref.: #20215]	Family	Planococcaceae		Int. J. Syst. Bacteriol. 30:237
[Ref.: #20215]	Genus	Bhargavaea	gen. nov. (VP)	Int. J. Syst. Evol. Microbiol. 59:2621*
[Ref.: #20215]	Species	Bhargavaea cecembensis	sp. nov. (VP)	Int. J. Syst. Evol. Microbiol. 59:2622*
[Ref.: #20215]	Full Scientific Name	Bhargavaea cecembensis Manorama et al. 2009 emend. Verma et al. 2012

Information on morphological and physiological propertiesMorphology and physiology

[Ref.: #28963]	Gram stain	positive
[Ref.: #28963]	Cell length	2 µm
[Ref.: #28963]	Cell width	6 µm
[Ref.: #28963]	Cell shape	rod-shaped
[Ref.: #28963]	Motility	no

	Enzyme	Enzyme activity	EC number
[Ref.: #28963]	catalase	+	1.11.1.6
[Ref.: #28963]	cytochrome oxidase	+	1.9.3.1
[Ref.: #28963]	urease	+	3.5.1.5

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #28963]		NaCl		growth	<6	%

	Metabolite production	Metabolite	Production
[Ref.: #28963]		Hydrogen sulfide	yes

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #28963]	Adonitol	+	carbon source
[Ref.: #28963]	Maltose	+	carbon source
[Ref.: #28963]	Nitrate	+	reduction
[Ref.: #28963]	Tween 60	+	carbon source

[Ref.: #16151]	Murein short key	A31
[Ref.: #16151]	Murein types	A1gamma m-Dpm-direct

[Ref.: #28963]

Oxygen tolerance

aerobe

[Ref.: #28963]

Ability of spore formation

Information on culture and growth conditionsCulture and growth conditions

[Ref.: #16151]

Culture medium

CASO AGAR (MERCK 105458) (DSMZ Medium 220), 30°C, + 10 µg/ml MnSO₄, pH 7.2

[Ref.: #16151]

Culture medium growth

[Ref.: #16151]

Culture medium link

medium recipe provided by DSMZ

		Temperature
[Ref.: #16151]	growth	30 ̊C
[Ref.: #28963]	growth	15-55 ̊C
[Ref.: #28963]	optimum	37 ̊C

[Ref.: #16151]

Temperature range

mesophilic

	pH	Kind of pH		pH
[Ref.: #28963]			growth	7-7.5

Information on isolation source, the sampling and environmental conditionsIsolation, sampling and environmental information

[Ref.: #16151]

Sample type/isolated from

Deep-sea sediments

[Ref.: #16151]

Geographic location (country and/or sea, region)

Indian Ocean, Chagos–Laccadive ridge system, 111060 S, 721310 E

[Ref.: #16151]

Country

India

[Ref.: #16151]

Continent

Asia

Isolation sources categories

#Environmental	#Aquatic	#Marine
#Environmental	#Aquatic	#Sediment

What are isolation sources categories?

* marker position based on {}

Information on possible application of the strain and its possible interaction with e.g. potential hostsApplication and interaction

[Ref.: #16151]

Biosafety level

Risk group (German classification)

Information on genomic background e.g. entries in nucleic sequence databassMolecular biology

[Ref.: #16151]	GC-content	59.5 mol%	thermal denaturation, midpoint method (Tm)
[Ref.: #16151]	GC-content	53.7 mol%	thermal denaturation, midpoint method (Tm)
[Ref.: #28963]	GC-content	59.5 mol%

Sequence information:

	Sequence database	Sequence accession description	Sequence accession number	Sequence length (bp)	Associated NCBI tax ID
[Ref.: #16151]	INSDC (WGS)	Bhargavaea cecembensis DSE10, whole genome shotgun sequencing project	AOFT00000000	39	1235279
[Ref.: #16151]	EMBL Direct submission	Bhargavaea cecembensis partial 16S rRNA gene, type strain DSE10T	AM286423	1544	394098
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Bhargavaea cecembensis strain DSE10 16S ribosomal RNA gene, partial sequence	HQ424469	1516	394098	*

Availability in culture collectionsStrain availability

[Ref.: #16151]

Culture collection no.

DSM 22132, JCM 14375, LMG 24411

[Ref.: #16151]

Strain history

<- S. Shivaji, Centre for Cellular and Molecular Biology, Hyderabad, India; DSE10

[Ref.: #20218]

Associated Passport(s) in StrainInfo

844469, 764221

References

#16151

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 22132

#20215

Leibniz Institute DSMZ D.Gleim, M.Kracht, N.Weiss et. al.: Prokaryotic Nomenclature Up-to-date - compilation of all names of Bacteria and Archaea, validly published according to the Bacteriological Code since 1. Jan. 1980, and validly published nomenclatural changes since .

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#28963

Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 ) - originally annotated from #25400 (see below)

#25400

IJSEM 2618 2009 ( DOI 10.1099/ijs.0.002691-0 )

* These References are textmined

Search for species Bhargavaea cecembensis in external resources:
SILVA
BRENDA
PANGAEA
StrainInfo
GBIF