Rhodococcus rhodochrous 372, KMRh | Type strain | DSM 43241, ATCC 13808, CIP 104376, IMET 7374, KCC A-0202, NCIB 11147, NCTC 10210

Strain identifier

BacDive ID: 10908

Type strain:

Species: Rhodococcus rhodochrous

Strain Designation: 372, KMRh

Culture col. no.: DSM 43241, ATCC 13808, CIP 104376, IMET 7374, KCC A-0202, NCIB 11147, NCTC 10210

Section

Name and taxonomic classification
Morphology and physiology
Culture and growth conditions
Application and interaction
Molecular biology
Strain availability

External links

Information on the name and the taxonomic classification.Name and taxonomic classification

[Ref.: #10897]	Domain	Bacteria
[Ref.: #10897]	Phylum	Actinobacteria
[Ref.: #10897]	Class	Actinobacteria
[Ref.: #10897]	Order	Actinomycetales
[Ref.: #10897]	Family	Nocardiaceae
[Ref.: #10897]	Genus	Rhodococcus
[Ref.: #10897]	Species	Rhodococcus rhodochrous
[Ref.: #10897]	Full Scientific Name	Rhodococcus rhodochrous (Zopf 1891) Tsukamura 1974 emend. Rainey et al. 1995
[Ref.: #10897]	Strain Designation	372, KMRh
[Ref.: #10897]	Type strain

		Prokaryotic Nomenclature Up-to-date (PNU)	Taxonomical status	Literature reference
[Ref.: #20215]	Domain	Bacteria
[Ref.: #20215]	Phylum	Actinobacteria
[Ref.: #20215]	Class	Actinobacteria		Int. J. Syst. Bacteriol. 47:483*
[Ref.: #20215]	Family	Nocardiaceae
[Ref.: #20215]	Genus	Rhodococcus	genus (AL)	Int. J. Syst. Bacteriol. 30:356 (AL)
[Ref.: #20215]	Species	Rhodococcus rhodochrous	species (AL)	Int. J. Syst. Bacteriol. 30:356 (AL)
[Ref.: #20215]	Full Scientific Name	Rhodococcus rhodochrous (Zopf 1891) Tsukamura 1974 emend. Rainey et al. 1995

[Ref.: #20215]	Synonym	Nocardia rubra
[Ref.: #20215]	Synonym	Nocardia salmonicolor
[Ref.: #20215]	Synonym	Rhodococcus roseus

Information on morphological and physiological propertiesMorphology and physiology

[Ref.: #19560]	Colony color	Orange red
[Ref.: #19560]	Incubation period	10-14 days
[Ref.: #19560]	Cultivation medium used	ISP 2

[Ref.: #19560]	Colony color	Rose
[Ref.: #19560]	Incubation period	10-14 days
[Ref.: #19560]	Cultivation medium used	ISP 3

[Ref.: #19560]	Colony color	Rose
[Ref.: #19560]	Incubation period	10-14 days
[Ref.: #19560]	Cultivation medium used	ISP 4

[Ref.: #19560]	Colony color	Beige
[Ref.: #19560]	Incubation period	10-14 days
[Ref.: #19560]	Cultivation medium used	ISP 5

[Ref.: #19560]	Colony color	Beige
[Ref.: #19560]	Incubation period	10-14 days
[Ref.: #19560]	Cultivation medium used	ISP 6

[Ref.: #19560]	Colony color	Rose
[Ref.: #19560]	Incubation period	10-14 days
[Ref.: #19560]	Cultivation medium used	ISP 7

API® 20E:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	beta-GalactosidaseONPG	Arginine dihydrolaseADH (Arg)	Lysine decarboxylaseLDC (Lys)	Ornithine decarboxylaseODC	Citrate utilizationCIT	H2S productionH2S	Urease/urea hydrolysisURE	Tryptophan deaminaseTDA (Trp)	Indole productionIND	Acetoin production (Voges Proskauer test)VP	Gelatinase/gelatin hydrolysisGEL	Fermentation/oxidation of D-glucoseGLU	Fermentation/oxidation of D-mannitolMAN	Fermentation/oxidation of inositolINO	Fermentation/oxidation of sorbitolSor	Fermentation/oxidation of L-rhamnoseRHA	Fermentation/oxidation of sucroseSAC	Fermentation/oxidation of melibioseMEL	Fermentation/oxidation of amygdalinAMY	Fermentation/oxidation of L-arabinoseARA	Cytochrome oxidaseOX	Nitrite productionNO2	Reduction to N2N2	MotilityMOB	Growth on MacConkey mediumMAC	Oxidative catabolisation of D-glucoseOF-O	Fermentation of D-glucoseOF-F
[Ref.: #19560]	412	-	-	-	-	-	-	-	-	-	-	-	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.

	Metabolite	Utilization activity
[Ref.: #19560]	Arabinose	-
[Ref.: #19560]	Cellulose	-
[Ref.: #19560]	Fructose	+
[Ref.: #19560]	Glucose	+
[Ref.: #19560]	Inositol	-
[Ref.: #19560]	Mannitol	+
[Ref.: #19560]	Raffinose	-
[Ref.: #19560]	Rhamnose	-
[Ref.: #19560]	Sucrose	-
[Ref.: #19560]	Xylose	-

[Ref.: #19560]	Multicellular complex forming ability	no
[Ref.: #19560]	Medium Name (multicellularity)	ISP 2

[Ref.: #19560]	Multicellular complex forming ability	no
[Ref.: #19560]	Medium Name (multicellularity)	ISP 3

[Ref.: #19560]	Multicellular complex forming ability	no
[Ref.: #19560]	Medium Name (multicellularity)	ISP 4

[Ref.: #19560]	Multicellular complex forming ability	no
[Ref.: #19560]	Medium Name (multicellularity)	ISP 5

[Ref.: #19560]	Multicellular complex forming ability	no
[Ref.: #19560]	Medium Name (multicellularity)	ISP 6

[Ref.: #19560]	Multicellular complex forming ability	no
[Ref.: #19560]	Medium Name (multicellularity)	ISP 7

Information on culture and growth conditionsCulture and growth conditions

[Ref.: #10897]

Culture medium

GYM STREPTOMYCES MEDIUM (DSMZ Medium 65), 28°C

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Culture medium growth

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Culture medium link

medium recipe provided by DSMZ

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Culture medium

ISP 2

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Culture medium growth

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Culture medium composition

expand / minimize

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Culture medium

ISP 3

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Culture medium growth

[Ref.: #19560]

Culture medium composition

expand / minimize

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Culture medium

ISP 4

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Culture medium growth

[Ref.: #19560]

Culture medium composition

expand / minimize

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Culture medium

ISP 5

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Culture medium growth

[Ref.: #19560]

Culture medium composition

expand / minimize

[Ref.: #19560]

Culture medium

ISP 6

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Culture medium growth

[Ref.: #19560]

Culture medium composition

expand / minimize

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Culture medium

ISP 7

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Culture medium growth

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Culture medium composition

expand / minimize

[Ref.: #41148]

Culture medium

MEDIUM 29- Brain heart agar

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Culture medium growth

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Culture medium composition

expand / minimize

		Temperature
[Ref.: #10897]	growth	28 ̊C
[Ref.: #19560]	optimum	30 ̊C
[Ref.: #41148]	growth	30 ̊C

[Ref.: #10897]	Temperature range	mesophilic
[Ref.: #19560]	Temperature range	mesophilic

Information on possible application of the strain and its possible interaction with e.g. potential hostsApplication and interaction

[Ref.: #10897]	Pathogenicity (human)	yes
[Ref.: #10897]	Biosafety level	1	Risk group (German classification)
[Ref.: #19560]	Biosafety level	1	Risk group (German classfication)

Information on genomic background e.g. entries in nucleic sequence databassMolecular biology

Sequence information:

Only first 5 entries are displayed. Click here to see all.

	Sequence database	Sequence accession description	Sequence accession number	Sequence length (bp)	Associated NCBI tax ID
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Rhodococcus rhodochrous strain 372 60 kDa chaperonin gene, partial cds	JQ356851	552	1829	*
[Ref.: #20218]	Marker Gene (DDBJ Direct submission)	Rhodococcus rhodochrous gyrB gene for DNA gyrase B subunit, partial cds, strain ATCC 13808	AB014173	1263	1829	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Rhodococcus erythropolis strain ATCC 13808 16S ribosomal RNA gene, partial sequence	AY281106	971	1833	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Rhodococcus rhodochrous strain ATCC 13808 FadD32 (fadD32) gene, partial cds; and Pks13 (pks13) and AccD4 (accD4) genes, complete cds	AY439008	7752	1829	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Rhodococcus rhodochrous strain ATCC 13808 16S ribosomal RNA gene, partial sequence	GQ871830	609	1829	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Rhodococcus rhodochrous strain ATCC 13808 SecA1 (secA1) gene, partial cds	GU179142	470	1829	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Rhodococcus rhodochrous isolate DSM43241 TrpB (trpB) gene, partial cds	DQ192167	454	1829	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Rhodococcus rhodochrous catechol 1,2-dioxygenase (catA) gene, partial cds	EU004436	503	1829	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Rhodococcus rhodochrous strain DSM 43241 16S ribosomal RNA gene, partial sequence	FJ468342	1444	1829	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Rhodococcus rhodochrous strain DSM 43241 chaperonin-60 (cpn60) gene, partial cds	JQ613501	552	1829	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Rhodococcus rhodochrous strain DSM 43241 16S ribosomal RNA gene, partial sequence	KF410366	1375	1829	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Rhodococcus rhodochrous strain DSM 43241 30S ribosomal protein S1 (rpsA) gene, partial cds	KF410402	888	1829	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Rhodococcus rhodochrous strain DSM 43241 polynucleotide phosphorylase (pnp) gene, partial cds	KF410438	867	1829	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Rhodococcus rhodochrous strain DSM 43241 amidophosphoribosyltransferase PurF (purF) gene, partial cds	KF410474	672	1829	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Rhodococcus rhodochrous strain DSM 43241 phosphoribosylformylglycinamide synthetase PurL (purL) gene, partial cds	KF410510	1272	1829	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Rhodococcus rhodochrous strain DSM 43241 RNA polymerase subunit beta' RpoC (rpoC) gene, partial cds	KF410546	1422	1829	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Rhodococcus rhodochrous strain DSM 43241 preprotein translocase membrane subunit SecY (secY) gene, partial cds	KF410582	666	1829	*
[Ref.: #20218]	Marker Gene (EMBL Direct submission)	R.rhodochrous (DSM 43241) 16S rRNA gene	X79288	1474	1829	*
[Ref.: #20218]	Marker Gene (EMBL Direct submission)	R. rhodochrous 5S rRNA	X55254	120	1829	*

Availability in culture collectionsStrain availability

[Ref.: #10897]

Culture collection no.

DSM 43241, ATCC 13808, CIP 104376, IMET 7374, KCC A-0202, NCIB 11147, NCTC 10210

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Strain history

<- NCTC (Mycobacterium rhodochrous) <- R.E. Gordon, 372 <- R.S. Breed, KMRh (Rhodococcus rhodochrous) <- Kral Collection <- W. Migula

[Ref.: #20218]

Associated Passport(s) in StrainInfo

21244, 21242, 154636, 21248, 21251, 21252, 21253

References

#10897

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 43241

#19560

Wink, J.: Compendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig .

#20215

Leibniz Institute DSMZ D.Gleim, M.Kracht, N.Weiss et. al.: Prokaryotic Nomenclature Up-to-date - compilation of all names of Bacteria and Archaea, validly published according to the Bacteriological Code since 1. Jan. 1980, and validly published nomenclatural changes since .

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#41148 ; Curators of the CIP;
* These References are textmined

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