North Sea Microbiome Dashboard
The North Sea Marine Microbiome project assembles aerobic heterotrophic bacteria from the German North Sea which are representative of major taxa and functional diversity found in temperate coastal shelf seas. The strains are publicly available at the Leibniz Institute DSMZ.
Total strains
19
19
Total species
14
14
Mean cell length / width
1.88 / 0.64 µm
1.88 / 0.64 µm
Mean temperature optimum
27.75 C°
27.75 C°
Mean pH optimum
7.57
7.57
Mean incubation time
3 days
3 days
Mean salt optimum
3.03 %
3.03 %
16S sequence accessions
13
13
| BacDive ID | Type strain | Species | Culture col. no. | NCBI tax ID(s) |
|---|---|---|---|---|
| 168438 |  |
Adhaeretor mobilis | VKM B-3444, CECT 30427, DSM 29816 | 1930276 (species) |
| 391 | |
Alcanivorax borkumensis | DSM 11573, ATCC 700651, CIP 105606 | 59754 (species) |
| 17910 | |
Congregibacter litoralis | DSM 17192, CECT 7588, NBRC 104960 | 393662 (species) |
| 13662 | |
Dinoroseobacter shibae | DSM 16493, DFL 12 | 215813 (species), 398580 (strain) |
| 5619 | |
Flagellimonas ruestringensis | DSM 13258, KCTC 12948, LMG 19739, CIP 107369, KCTC 62007 | 111501 (species), 886377 (strain) |
| 169501 |  |
Formosa sp. | DSM 29894 | 2018467 (species) |
| 5610 | |
Maribacter forsetii | DSM 18666, CIP 109503 | 444515 (species) |
| 493 | |
Marinobacter adhaerens | DSM 23420, CIP 110141, NCBI AY241552 | 1033846 (species) |
| 131325 | |
Octadecabacter temperatus | DSM 26878, LMG 27946 | 1458307 (species) |
| 13731 | |
Phaeobacter inhibens | DSM 16374, CIP 109289, LMG 22475 | 221822 (species), 999548 (strain) |
| 24527 | |
Planktomarina temperata | DSM 22400, JCM 18269, RCA 23 | 1284658 (species) |
| 175373 | |
Polaribacter sp. | DSM 116206 | 1920175 (species) |
| 160712 | |
Pseudooceanicola algae | DSM 29013, LMG 30557 | 1537215 (species) |
| 8208 | |
Psychrobacter lutiphocae | DSM 21542, CCUG 56590, IMMIB L-1110, CIP 110018 | 1123033 (strain), 540500 (species) |
| 131269 | |
Rhodopirellula syltensis | DSM 24042, JCM 17625 | 2024855 (species) |
| 175095 | |
Sulfitobacter sp. | DSM 111043 | 1903071 (species) |
| 169247 | |
Tenacibaculum sp. | DSM 111039 | 1906242 (species) |
| 169728 | |
Zobellia sp. | DSM 29510 | 2010247 (species) |
Taxonomy
Morphology
Cultivation
Metabolism
Isolation sources
Molecular biology & pathogenicity
Tests & profiles
Special Collections
- DZIF
- Mouse-Microbiome
- Pig-Microbiome
- Chicken-Microbiome
- Arabidopsis-Microbiome
- ESA
- North Sea Microbiome
- Reichenbach collection of Myxobacteria
- Wink compendium of Actinobacteria
- Culture Collection University Of Gothenburg
- Collection de l’Institut Pasteur
- Leibniz-Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen
- Japan Collection of Microorganisms
- Korean Collection for Type Cultures
- University of Coimbra Bacteria Culture Collection
- Strains from literature