Name: Halomonas meridiana B1
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 6021

Type strain:

Species: Halomonas meridiana

Strain Designation: B1, Eplume2

Culture col. no.: DSM 15721

Strain history: <- M. C. Marquez; B1 <- J. Z. Kaye

NCBI tax ID(s): 29570 (species)

SI-ID 139422

CCM 7106, CECT 5816, ATCC BAA-804, DSM 15721

Other strains from Halomonas meridiana

H. meridiana DSM 5425, ACAM 246, ATCC 49692, ... (type strain)
H. meridiana 1874b, Slthf1, DSM 15724
H. meridiana CIP 108040
H. meridiana CIP 108043

Section

Halomonas meridiana B1 is a mesophilic bacterium that was isolated from hydrothermal plume.

mesophilic
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	*Oceanospirillales*
	Family	*Halomonadaceae*
	Genus	*Halomonas*
	Species	**Halomonas meridiana**
	Full Scientific Name (LPSN)	Halomonas meridiana James et al. 1990

Information on culture and growth conditions Culture and growth conditions

[Ref.: #6079]

Culture medium

BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)

[Ref.: #6079]

Culture medium growth

[Ref.: #6079]

Culture medium link

Medium recipe at MediaDive

[Ref.: #6079]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #6079]			growth	28 °C

[Ref.: #6079]

Temperature range

mesophilic

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #6079]	Sample type/isolated from	hydrothermal plume
[Ref.: #6079]	Geographic location (country and/or sea, region)	NE Pacific Ocean, Juan de Fuca Ridge
[Ref.: #6079]	Country	Canada
[Ref.: #6079]	Country ISO 3 Code	CAN
[Ref.: #6079]	Continent	North America
* marker position based on {}

Isolation sources categories

#Environmental	#Aquatic	-
#Condition	#Thermophilic (>45°C)	-

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #6079]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Halomonas meridiana Eplume2	GCA_011764625	complete	GenBank	29570 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Halomonas meridiana Eplume2 NCBI: GCA_011764625.1
[Ref.: #69480]	motile	yes	90.804	no
[Ref.: #69480]	flagellated	yes	61.221	no
[Ref.: #69480]	gram-positive	no	98.879	no
[Ref.: #69480]	anaerobic	no	99.076	no
[Ref.: #69480]	aerobic	yes	93.281	no
[Ref.: #69480]	halophile	yes	91.178	no
[Ref.: #69480]	spore-forming	no	96.002	no
[Ref.: #69480]	glucose-util	yes	87.785	no
[Ref.: #69480]	thermophile	no	98.484	no
[Ref.: #69480]	glucose-ferment	no	73.667	no

Availability in culture collections External links

[Ref.: #6079]

Culture collection no.

DSM 15721

[Ref.: #75507]

SI-ID 139422

Literature:

Topic	Title	Authors	Journal	DOI	Year
Genetics	Complete Genome Sequence of Halomonas meridiana Strain Eplume2, Isolated from a Hydrothermal Plume in the Northeast Pacific Ocean.	Kurihara Y, Kawai S, Sakai A, Galipon J, Arakawa K	Microbiol Resour Announc	10.1128/MRA.00330-20	2020	*
Phylogeny	Halomonas neptunia sp. nov., Halomonas sulfidaeris sp. nov., Halomonas axialensis sp. nov. and Halomonas hydrothermalis sp. nov.: halophilic bacteria isolated from deep-sea hydrothermal-vent environments.	Kaye JZ, Marquez MC, Ventosa A, Baross JA	Int J Syst Evol Microbiol	10.1099/ijs.0.02799-0	2004	*

References

#6079

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 15721

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#75507

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID139422.1 )

* These data were automatically processed and therefore are not curated

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Halomonas meridiana Eplume2

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