Name: Archaeoglobus infectus DSM 18877
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 18099

Type strain:

Species: Archaeoglobus infectus

Culture col. no.: DSM 18877, NBRC 100649, ARC Arc51, ARC 51

Strain history: <- K. Mori, NBRC, NITE (Natl. Inst. of Technol. and Evaluation), Kisarazu, Japan; Arc51 <- K. Mori {2002}

NCBI tax ID(s): 1121009 (strain), 403219 (species)

SI-ID 407496

DSM 18877

Section

Archaeoglobus infectus DSM 18877 is an anaerobe, thermophilic, motile archaeon that was isolated from rock collected from hydrothermal field, 1380 m depth.

coccus-shaped
motile
anaerobe
thermophilic
16S sequence
Archaea

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Archaea"
	Phylum	*Methanobacteriota*
	Class	*Archaeoglobi*
	Order	*Archaeoglobales*
	Family	*Archaeoglobaceae*
	Genus	*Archaeoglobus*
	Species	**Archaeoglobus infectus**
	Full Scientific Name (LPSN)	Archaeoglobus infectus Mori et al. 2008

Information on morphological and physiological properties Morphology

[Ref.: #32391]	Cell width	0.75 µm

[Ref.: #32391]	Cell shape	coccus-shaped

[Ref.: #32391]	Motility	yes

[Ref.: #32391]

Pigment production

yes

Information on culture and growth conditions Culture and growth conditions

[Ref.: #7757]

Culture medium

ARCHAEOGLOBUS INFECTUS MEDIUM (DSMZ Medium 1098)

[Ref.: #7757]

Culture medium growth

[Ref.: #7757]

Culture medium link

Medium recipe at MediaDive

[Ref.: #7757]

Culture medium composition

expand / minimize

		Temperature
[Ref.: #7757]	growth	70 °C
[Ref.: #32391]	growth	60-75 °C
[Ref.: #32391]	optimum	70 °C

[Ref.: #7757]	Temperature range	thermophilic
[Ref.: #32391]	Temperature range	thermophilic

	pH	Kind of pH		pH
[Ref.: #32391]			optimum	6.5

Information on physiology and metabolism Physiology and metabolism

[Ref.: #7757]	Oxygen tolerance	anaerobe
[Ref.: #32391]	Oxygen tolerance	anaerobe

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #32391]		NaCl		optimum	3	%

	Metabolite utilization	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #32391]		acetate ChEBI	+	carbon source

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #7757]	Sample type/isolated from	rock collected from hydrothermal field, 1380 m depth
[Ref.: #7757]	Geographic location (country and/or sea, region)	Northern Pacific, Izu-Bonin Arc, Suiyo Seamonunt
[Ref.: #7757]	Country	Japan
[Ref.: #7757]	Country ISO 3 Code	JPN
[Ref.: #7757]	Continent	Asia
[Ref.: #7757]	Geographic location	28.5667°/140.4830°
* marker position based on {}

Isolation sources categories

#Environmental	#Aquatic	#Hydrothermal vent
#Environmental	#Terrestrial	#Geologic
#Condition	#Thermophilic (>45°C)	-

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AB274307 (>99% sequence identity) for Archaeoglobus infectus subclade from Microbeatlas

Aquatic Samples	45
Soil Samples	1
Animal Samples	8
Plant Samples
Total Samples	54

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #7757]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #7757]	Archaeoglobus infectus gene for 16S rRNA, partial sequence	AB274307	1412	ENA	1121009 tax ID

[Ref.: #7757]	GC-content	46 mol%	high performance liquid chromatography (HPLC)
[Ref.: #32391]	GC-content	46 mol%

Availability in culture collections External links

[Ref.: #7757]

Culture collection no.

DSM 18877, NBRC 100649, ARC Arc51, ARC 51

[Ref.: #87087]

SI-ID 407496

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Archaeoglobus infectus sp. nov., a novel thermophilic, chemolithoheterotrophic archaeon isolated from a deep-sea rock collected at Suiyo Seamount, Izu-Bonin Arc, western Pacific Ocean.	Mori K, Maruyama A, Urabe T, Suzuki K, Hanada S	Int J Syst Evol Microbiol	10.1099/ijs.0.65422-0	2008	*

References

#7757

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 18877

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#32391

Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #28615 (see below)

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#87087

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID407496.1 )

#28615

IJSEM 810 2008 ( DOI 10.1099/ijs.0.65422-0 , PubMed 18398174 )

* These data were automatically processed and therefore are not curated

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