Name: Mycoplasma marinum PE
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 169697

Type strain:

Species: Mycoplasma marinum

Strain Designation: PE

Culture col. no.: DSM 105487, CIP 111404

Strain history: CIP <- 2017, A.S. Ramirez, Las Palmas Univ., Arucas, Las Palmas, Canary Islands, Spain: strain PE <- O. Vega Orellana

SI-ID 407182

DSM 105487, CIP 111404

Section

Mycoplasma marinum PE is a mesophilic bacterium that was isolated from Octopus .

mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Mycoplasmatota*
	Class	*Mollicutes*
	Order	*Mycoplasmatales*
	Family	*Mycoplasmataceae*
	Genus	*Mycoplasma*
	Species	**Mycoplasma marinum**
	Full Scientific Name (LPSN)	Mycoplasma marinum Ramírez et al. 2020

Information on culture and growth conditions Culture and growth conditions

[Ref.: #69064]

Culture medium

SP4-Z MEDIUM (DSMZ Medium 1076b)

[Ref.: #69064]

Culture medium growth

[Ref.: #69064]

Culture medium link

Medium recipe provided by DSMZ

[Ref.: #115955]

Culture medium

CIP Medium ML10

[Ref.: #115955]

Culture medium growth

[Ref.: #115955]

Culture medium link

Medium recipe provided by DSMZ

[Ref.: #115955]

Culture medium

CIP Medium 72

[Ref.: #115955]

Culture medium growth

[Ref.: #115955]

Culture medium link

Medium recipe provided by DSMZ

[Ref.: #115955]

Culture medium

CIP Medium A7

[Ref.: #115955]

Culture medium growth

[Ref.: #115955]

Culture medium link

Medium recipe provided by DSMZ

	Temperatures	Kind of temperature		Temperature
[Ref.: #69064]			growth	25 °C

[Ref.: #69064]

Temperature range

mesophilic

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #69064]	Sample type/isolated from	Octopus (Octopus vulgaris)
[Ref.: #69064]	Geographic location (country and/or sea, region)	Gran Canaria
[Ref.: #69064]	Country	Spain
[Ref.: #69064]	Country ISO 3 Code	ESP
[Ref.: #69064]	Continent	Europe
[Ref.: #69064]	Geographic location	27.9586°/-15.5925°

[Ref.: #115955]	Sample type/isolated from	Animal, Esophagus, Octopus vulgaris
[Ref.: #115955]	Geographic location (country and/or sea, region)	Las Palmas , Canary Islands
[Ref.: #115955]	Country	Spain
[Ref.: #115955]	Country ISO 3 Code	ESP
[Ref.: #115955]	Continent	Europe
[Ref.: #115955]	Isolation date	2011-12-05
* marker position based on {}

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #115955]

Biosafety level

Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #69064]	Mycoplasma sp. PE partial 16S rRNA gene, strain PE	LT716014	1525	ENA	1937190 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Mycoplasma marinum PE	GCA_004335975	contig	GenBank	1937190 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Mycoplasma marinum PE NCBI: GCA_004335975.1
[Ref.: #69480]	motile	no	94.352	no
[Ref.: #69480]	flagellated	no	98.065	no
[Ref.: #69480]	gram-positive	yes	80.515	no
[Ref.: #69480]	anaerobic	no	96.344	no
[Ref.: #69480]	aerobic	no	95.489	no
[Ref.: #69480]	halophile	yes	70.014	no
[Ref.: #69480]	spore-forming	no	97.872	no
[Ref.: #69480]	glucose-util	yes	88.347	no
[Ref.: #69480]	thermophile	no	95.794	yes
[Ref.: #69480]	glucose-ferment	yes	72.645	no

Availability in culture collections External links

[Ref.: #69064]

Culture collection no.

DSM 105487, CIP 111404

[Ref.: #115868]

SI-ID 407182

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	First description of two moderately halophilic and psychrotolerant Mycoplasma species isolated from cephalopods and proposal of Mycoplasma marinum sp. nov. and Mycoplasma todarodis sp. nov.	Ramirez AS, Vega-Orellana OM, Viver T, Poveda JB, Rosales RS, Poveda CG, Spergser J, Szostak MP, Caballero MJ, Ressel L, Bradbury JM, Mar Tavio M, Karthikeyan S, Amann R, Konstantinidis KT, Rossello-Mora R	Syst Appl Microbiol	10.1016/j.syapm.2019.04.003	2019	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69064

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 105487

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#115868

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID407182.1 )

#115955 Collection of Institut Pasteur ; Curators of the CIP; CIP 111404
* These data were automatically processed and therefore are not curated

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