Name: Mycoplasma crocodyli MP145
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 167966

Type strain:

Species: Mycoplasma crocodyli

Strain Designation: MP145

Culture col. no.: ATCC 51981

NCBI tax ID(s): 512564 (strain), 50052 (species)

SI-ID 43273

ATCC 51981

Section

Mycoplasma crocodyli MP145 is an animal pathogen of the family Mycoplasmataceae.

animal pathogen
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Mycoplasmatota*
	Class	*Mollicutes*
	Order	*Mycoplasmatales*
	Family	*Mycoplasmataceae*
	Genus	*Mycoplasma*
	Species	**Mycoplasma crocodyli**
	Full Scientific Name (LPSN)	Mycoplasma crocodyli Kirchhoff et al. 1997

Synonym

"Mycoplasmopsis crocodyli"

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #69479]

Global distribution of 16S sequence AF412977 (>99% sequence identity) for Mycoplasma crocodyli from Microbeatlas

Aquatic Samples
Soil Samples
Animal Samples	2
Plant Samples
Total Samples	2

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #20215]	Pathogenicity (animal)	yes
[Ref.: #20215]	Biosafety level	2	Risk group

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20215]	Mycoplasma crocodyli 16S ribosomal RNA gene, partial sequence	AF412977	1447	ENA	512564 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Mycoplasma crocodyli MP145	GCA_000025845	complete	GenBank	512564 tax ID	*
[Ref.: #66792]	Mycoplasma crocodyli MP145	512564.3	complete	PATRIC	512564 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Mycoplasma crocodyli MP145 MP145 NCBI: GCA_000025845.1
[Ref.: #69480]	motile	no	94.325	no
[Ref.: #69480]	flagellated	no	97.923	no
[Ref.: #69480]	gram-positive	yes	61.401	no
[Ref.: #69480]	anaerobic	no	97.203	no
[Ref.: #69480]	aerobic	no	95.419	no
[Ref.: #69480]	halophile	yes	55.356	no
[Ref.: #69480]	spore-forming	no	98.722	no
[Ref.: #69480]	glucose-util	yes	89.936	no
[Ref.: #69480]	thermophile	no	97.843	no
[Ref.: #69480]	glucose-ferment	yes	82.605	no

Availability in culture collections External links

[Ref.: #20215]

Culture collection no.

ATCC 51981

[Ref.: #115066]

SI-ID 43273

Literature:

Topic	Title	Authors	Journal	DOI	Year
Genetics	Genome sequences of Mycoplasma alligatoris A21JP2T and Mycoplasma crocodyli MP145T.	Brown DR, Farmerie WG, May M, Benders GA, Durkin AS, Hlavinka K, Hostetler J, Jackson J, Johnson J, Miller RH, Paralanov V, Radune D, Szczypinski B, Glass JI	J Bacteriol	10.1128/JB.00309-11	2011	*
Phylogeny	Mycoplasma crocodyli sp. nov., a new species from crocodiles.	Kirchhoff H, Mohan K, Schmidt R, Runge M, Brown DR, Brown MB, Foggin CM, Muvavarirwa P, Lehmann H, Flossdorf J	Int J Syst Bacteriol	10.1099/00207713-47-3-742	1997	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#115066

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID43273.1 )

* These data were automatically processed and therefore are not curated

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Mycoplasma crocodyli MP145 MP145

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