Name: Mycoplasma simbae LX
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 167860

Type strain:

Species: Mycoplasma simbae

Strain Designation: LX

Culture col. no.: ATCC 49888, NCTC 11724

NCBI tax ID(s): 1408469 (strain), 36744 (species)

SI-ID 42735

ATCC 49888, NCTC 11724

Section

Mycoplasma simbae LX is a bacterium of the family Mycoplasmataceae.

16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Mycoplasmatota*
	Class	*Mollicutes*
	Order	*Mycoplasmatales*
	Family	*Mycoplasmataceae*
	Genus	*Mycoplasma*
	Species	**Mycoplasma simbae**
	Full Scientific Name (LPSN)	Mycoplasma simbae Hill 1992

Synonym

"Mycoplasmopsis simbae"

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #69479]

Global distribution of 16S sequence U16323 (>99% sequence identity) for Mycoplasmopsis from Microbeatlas

Aquatic Samples
Soil Samples	2
Animal Samples	7
Plant Samples
Total Samples	9

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #20215]

Biosafety level

Risk group

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20215]	Mycoplasma simbae strain ATCC 49888 16S ribosomal RNA gene, partial sequence	U16323	1431	ENA	36744 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Mycoplasma simbae ATCC 49888	GCA_000702705	contig	GenBank	1408469 tax ID	*
[Ref.: #66792]	Mycoplasma simbae ATCC 49888	1408469.3	wgs	PATRIC	1408469 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Mycoplasma simbae ATCC 49888 PATRIC: 1408469.3
[Ref.: #69480]	motile	no	94.041	no
[Ref.: #69480]	gram-positive	yes	57.381	no
[Ref.: #69480]	anaerobic	no	97.925	no
[Ref.: #69480]	halophile	no	52.897	no
[Ref.: #69480]	spore-forming	no	97.996	no
[Ref.: #69480]	thermophile	no	97.692	no
[Ref.: #69480]	glucose-util	yes	83.839	no
[Ref.: #69480]	aerobic	no	92.406	no
[Ref.: #69480]	flagellated	no	96.941	no
[Ref.: #69480]	glucose-ferment	yes	69.837	no

Availability in culture collections External links

[Ref.: #20215]

Culture collection no.

ATCC 49888, NCTC 11724

[Ref.: #115037]

SI-ID 42735

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Mycoplasma simbae sp. nov., Mycoplasma leopharyngis sp. nov., and Mycoplasma leocaptivus sp. nov., isolated from lions.	Hill AC	Int J Syst Bacteriol	10.1099/00207713-42-4-518	1992	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#115037

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID42735.1 )

* These data were automatically processed and therefore are not curated

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Mycoplasma simbae ATCC 49888

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