Name: Mycoplasma capricolum subsp. capripneumoniae F38
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 167726

Type strain:

Species: Mycoplasma capricolum subsp. capripneumoniae

Strain Designation: F38

Culture col. no.: NCTC 10192

NCBI tax ID(s): 40480 (subspecies)

SI-ID 100791

NCTC 10192

Section

Mycoplasma capricolum subsp. capripneumoniae F38 is an animal pathogen of the family Mycoplasmataceae.

animal pathogen
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Mycoplasmatota*
	Class	*Mollicutes*
	Order	*Mycoplasmatales*
	Family	*Mycoplasmataceae*
	Genus	*Mycoplasma*
	Species	**Mycoplasma capricolum subsp. capripneumoniae**
	Full Scientific Name (LPSN)	Mycoplasma capricolum subsp. capripneumoniae Leach et al. 1993

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #69479]

Global distribution of 16S sequence M94728 (>99% sequence identity) for Mycoplasma from Microbeatlas

Aquatic Samples	107
Soil Samples	14
Animal Samples	4511
Plant Samples	14
Total Samples	4646

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #20215]	Pathogenicity (animal)	yes
[Ref.: #20215]	Biosafety level	2	Risk group

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20215]	Mycoplasma capricolum capripneumoniae 16S ribosomal RNA (rrnB) gene, internal transcribed spacer 1 (rrnB), and 23S ribosomal RNA (rrnB) gene, complete sequence	M94728	1983	ENA	40480 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Mycoplasma capricolum subsp. capripneumoniae F38 = NCTC 10192T	GCA_000953375	complete	GenBank	40480 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Mycoplasma capricolum subsp. capripneumoniae type strain: F38 = NCTC 10192 NCBI: GCA_000953375.1
[Ref.: #69480]	motile	no	93.737	no
[Ref.: #69480]	flagellated	no	98.273	no
[Ref.: #69480]	gram-positive	yes	69.539	no
[Ref.: #69480]	anaerobic	no	95.787	no
[Ref.: #69480]	aerobic	no	96.545	no
[Ref.: #69480]	halophile	no	51.037	no
[Ref.: #69480]	spore-forming	no	98.712	no
[Ref.: #69480]	glucose-util	yes	92.373	no
[Ref.: #69480]	thermophile	no	93.047	no
[Ref.: #69480]	glucose-ferment	yes	81.326	no

Availability in culture collections External links

[Ref.: #20215]

Culture collection no.

NCTC 10192

[Ref.: #115007]

SI-ID 100791

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Proposal for designation of F38-type caprine mycoplasmas as Mycoplasma capricolum subsp. capripneumoniae subsp. nov. and consequent obligatory relegation of strains currently classified as M. capricolum (Tully, Barile, Edward, Theodore, and Erno 1974) to an additional new subspecies, M. capricolum subsp. capricolum subsp. nov.	Leach RH, Erno H, MacOwan KJ	Int J Syst Bacteriol	10.1099/00207713-43-3-603	1993	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#115007

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID100791.1 )

* These data were automatically processed and therefore are not curated

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Mycoplasma capricolum subsp. capripneumoniae type strain: F38 = NCTC 10192

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