Name: Mycoplasma phocoenae C264-GEN
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 166971

Type strain:

Species: Mycoplasma phocoenae

Strain Designation: C264-GEN

Culture col. no.: NCTC 14344, DSM 110687

Strain history: <- D. V. Volokhov, US FDA/CBER; C264-GEN

NCBI tax ID(s): 754517 (species)

Section

Mycoplasma phocoenae C264-GEN is a mesophilic bacterium that was isolated from genital swab from harbour porpoise .

mesophilic
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Mycoplasmatota*
	Class	*Mollicutes*
	Order	*Mycoplasmatales*
	Family	*Mycoplasmataceae*
	Genus	*Mycoplasma*
	Species	**Mycoplasma phocoenae**
	Full Scientific Name (LPSN)	Mycoplasma phocoenae Volokhov et al. 2022

Information on culture and growth conditions Culture and growth conditions

[Ref.: #68919]

Culture medium

SP4-Z MEDIUM (DSMZ Medium 1076b)

[Ref.: #68919]

Culture medium growth

[Ref.: #68919]

Culture medium link

Medium recipe provided by DSMZ

	Temperatures	Kind of temperature		Temperature
[Ref.: #68919]			growth	35 °C

[Ref.: #68919]

Temperature range

mesophilic

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #68919]	Sample type/isolated from	genital swab from harbour porpoise (Phocoena phocoena)
[Ref.: #68919]	Geographic location (country and/or sea, region)	Ocean Beach, San Francisco
[Ref.: #68919]	Country	USA
[Ref.: #68919]	Country ISO 3 Code	USA
[Ref.: #68919]	Continent	North America
[Ref.: #68919]	Geographic location	37.7557°/-122.5070°
* marker position based on {}

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Mycoplasma phocoenae C264-GEN	GCA_012934855	complete	GenBank	754517 tax ID	*
[Ref.: #66792]	Mycoplasma sp. Phocoena C-264-GEN	754517.3	complete	PATRIC	754517 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Mycoplasma phocoenae C264-GEN NCBI: GCA_012934855.1
[Ref.: #69480]	motile	no	94.341	no
[Ref.: #69480]	flagellated	no	97.622	no
[Ref.: #69480]	gram-positive	no	51.804	no
[Ref.: #69480]	anaerobic	no	97.278	no
[Ref.: #69480]	aerobic	no	94.181	no
[Ref.: #69480]	halophile	yes	62.872	no
[Ref.: #69480]	spore-forming	no	98.006	no
[Ref.: #69480]	glucose-util	yes	85.433	no
[Ref.: #69480]	thermophile	no	97.591	yes
[Ref.: #69480]	glucose-ferment	yes	70.595	no

Availability in culture collections External links

[Ref.: #20215]

Culture collection no.

NCTC 14344, DSM 110687

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Mycoplasma miroungirhinis sp. nov. and Mycoplasma miroungigenitalium sp. nov., isolated from northern elephant seals (Mirounga angustirostris), Mycoplasma phocoenae sp. nov., isolated from harbour porpoise (Phocoena phocoena), and Mycoplasma phocoeninasale sp. nov., isolated from harbour porpoise and California sea lions (Zalophus californianus).	Volokhov DV, Furtak VA, Blom J, Zagorodnyaya TA, Gao Y, Gulland FM	Int J Syst Evol Microbiol	10.1099/ijsem.0.005224	2022	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#68919

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 110687

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

* These data were automatically processed and therefore are not curated

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