Name: Kineococcus indalonis T90
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 160125

Type strain:

Species: Kineococcus indalonis

Strain Designation: T90

Culture col. no.: DSM 110026

Strain history: <- M. Porcar Miralles, University of Valencia, Institute for Integrative Systems Biology; T90

NCBI tax ID(s): 2696566 (species)

SI-ID 403100

DSM 110026

Section

Kineococcus indalonis T90 is a mesophilic, Gram-positive bacterium that was isolated from Biocrust.

Gram-positive
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Kineosporiales*
	Family	*Kineosporiaceae*
	Genus	*Kineococcus*
	Species	**Kineococcus indalonis**
	Full Scientific Name (LPSN)	Kineococcus indalonis Molina-Menor et al. 2021

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Gram stain	positive Confidence in %100

Information on culture and growth conditions Culture and growth conditions

[Ref.: #67029]

Culture medium

PP-MEDIUM (DSMZ Medium 513)

[Ref.: #67029]

Culture medium growth

[Ref.: #67029]

Culture medium link

Medium recipe at MediaDive

[Ref.: #67029]

Culture medium composition

expand / minimize

[Ref.: #67029]

Culture medium

R2A MEDIUM (DSMZ Medium 830)

[Ref.: #67029]

Culture medium growth

[Ref.: #67029]

Culture medium link

Medium recipe at MediaDive

[Ref.: #67029]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #67029]			growth	25 °C

[Ref.: #67029]

Temperature range

mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #69480]

Ability of spore formation

no Confidence in %98.806

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67029]	Sample type/isolated from	Biocrust
[Ref.: #67029]	Geographic location (country and/or sea, region)	Almeria
[Ref.: #67029]	Country	Spain
[Ref.: #67029]	Country ISO 3 Code	ESP
[Ref.: #67029]	Continent	Europe
* marker position based on {}

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67029]	Kineococcus sp. strain T90 16S ribosomal RNA gene, partial sequence	MN069867	1425	ENA	2696566 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Kineococcus indalonis T90	GCA_009906395	scaffold	GenBank	2696566 tax ID	*
[Ref.: #66792]	Kineococcus indalonis T90	2890530473	draft	JGI IMG/M	2696566 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Kineococcus indalonis T90 NCBI: GCA_009906395.1
[Ref.: #69481]	spore-forming	yes	83	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Kineococcus indalonis T90 NCBI: GCA_009906395.1
[Ref.: #69480]	motile	yes	72.111	no
[Ref.: #69480]	flagellated	no	88.611	no
[Ref.: #69480]	gram-positive	yes	92.976	no
[Ref.: #69480]	anaerobic	no	99.215	no
[Ref.: #69480]	aerobic	yes	90.305	no
[Ref.: #69480]	halophile	no	85.705	no
[Ref.: #69480]	spore-forming	no	83.095	no
[Ref.: #69480]	glucose-util	yes	88.057	no
[Ref.: #69480]	thermophile	no	98.895	yes
[Ref.: #69480]	glucose-ferment	no	72.053	no

Availability in culture collections External links

[Ref.: #67029]

Culture collection no.

DSM 110026

[Ref.: #112400]

SI-ID 403100

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Kineococcus vitellinus sp. nov., Kineococcus indalonis sp. nov. and Kineococcus siccus sp. nov., Isolated Nearby the Tabernas Desert (Almeria, Spain).	Molina-Menor E, Gimeno-Valero H, Pascual J, Pereto J, Porcar M	Microorganisms	10.3390/microorganisms8101547	2020	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67029

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 110026

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#112400

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID403100.1 )

* These data were automatically processed and therefore are not curated

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